Array 1 93584-94076 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABFCL010000004.1 Bittarella massiliensis strain GGCC_0305 NODE_4_length_172026_cov_631.448919, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ================================== ================== 93584 33 97.0 32 ................................C GCCAACCAGTCGGCGATCCCCTTGTACCCTAC 93649 33 100.0 33 ................................. TCAAGTATGGCCTGCGCCTGGGGGGTTAACACC 93715 33 100.0 32 ................................. TCCGGATCACCTCTATAATAGCGGTAGTTGAG 93780 33 100.0 32 ................................. CGTGACATCCACCATTCTGGCCCGATTATTTG 93845 33 97.0 33 ................................G ACGGTATCGGCGGCTTCCCGCTGGTGTGGGAGG 93911 33 100.0 34 ................................. GTCGGTTGCGGATGACTTCACTGAGCAGCTTCGC 93978 33 97.0 33 ................................T CTCATGCCACATTTCCCGCACGCTTGGCAAATC 94044 33 75.8 0 ................A....CA..CA..CG.C | ========== ====== ====== ====== ================================= ================================== ================== 8 33 95.8 33 GTCGCACCCCGCGCGGGTGCGTGGATTGAAATA # Left flank : GGGGACAGCGCCCTGGAGATCGCCGTGCGGGTCTGGACCGAGCCGGCAAAGGTCTTCCCCCTGAAATACGACCTGTTGGAGGAGATCAAGCGCACCTTTGACCGGGAGGGCATCGCCATCGCCTACCCCCATTTGGACGTGACGCTGCTCAAGCCGTAAAGCAAGCTCTTTTCCCATGGCCGCCCCAATGCGCGAAACAGCGCCGGGGCGGCTTTTTTTGCCGTTCAAAATGGCGATTCACCCTTTGCCATGCCGCTTCGCCTGCCAAGGCGGGCCCTTGAGATCAATCATCTTTTGGAAAAACAAAGATAAGCGGCTTGCATTCAAGGCAGTGCGAACATCAAGCGCACATGGATTTCTCTGCAGGTCCGCACCGAGAATACGGAGGAAAAACAGGAAAGGAGGGTGGGTAATAGAAAAACTGCGAAAAAATTGACAAGAGCTTGTACAAAAGATATAGTAAAGGGGCAAACAAGCATCCGCTTTTATGCACGTTTGCT # Right flank : CTCCCCCTTTTCCCCCCTTACAGCAGCAAAACAGCTGCCGCCGATTCTCTCGGCGGCAGCTGTTTTTTCGGTGCGGGCGGCTTTACTGGGCGGGGTCGATCTTGATCTCGGGCGCACACGGGGCGCTGCACTGGGCGTTTTCCTTGGTGAACTTCTGCTTGGCCTGGTTGATCTTGTCCGCCTGGGCGGCGGGGGTCTGGTACCAGCCCCGCTTCTGCATCTCCTCGAAGACCTCCATCTGAATCTGGTGCTCCTCGGCAAGGATGTCCATCATCACGCCCTTCATCTGCTTGGTGGCGCATTCGTCGGCAAAGGTGTTGTAGATGCCGGTGATCTGTTTTTGCGAACTCAACATATCCGTCAAAATCGACTTGTCATCCATCCTGTTGTTCATCTTCCCTTCCCCCTTCCCTGCCCTACAGGCAGGAGAGCAGCTTGTCAAAGTGGTTCTGGTGCTTGGCGGCCATCTGCTCACACTTGCTCTTCACCTGCGGGTCGGC # Questionable array : NO Score: 6.03 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCGCGCGGGTGCGTGGATTGAAATA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCCTCGCGGGTGCGTGGATTGAAATA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.40,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 24-453 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABFCL010000013.1 Bittarella massiliensis strain GGCC_0305 NODE_13_length_81970_cov_652.605957, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ===================================== ================== 24 31 100.0 35 ............................... CCTTGTAATCGTCACACAGTCCCGAAAGTACGCCG 90 31 96.8 35 ..............A................ CTTTCTGCCCCACGTGGGAGCAAAACAAAAGCGCG 156 31 100.0 37 ............................... CGTTTACTTTCCCGGCGCTTTGGGTCGCACCTACCGG 224 31 100.0 36 ............................... CCGCTACATACAGGGCGCTTACAAGCTGGTGCGCAG 291 31 96.8 35 ..........C.................... CCGGCACCCTTCCAAAAAATCCACCAGCAGAGGCG 357 31 96.8 35 ..........C.................... TTGAGCTTCTATCTTTCGCAGTCAAACCACACCAG 423 31 93.5 0 ...........A..........A........ | ========== ====== ====== ====== =============================== ===================================== ================== 7 31 97.7 36 TCGCACCCCATGCGGGTGCGTGGATTGAAAT # Left flank : CGTGGGAGCAAAACAAAAGCGCGT # Right flank : TTGTAAGGCCGCCACATCCACCTTCTCCGCCTCAGCAAGGGCCGTTTTTGCCTCGTCCCGCTCCTTTTTGGCGGCATTGTAGACCTCTTTGGGGACAGCGTACTTCGGCAACTCTTTGCTCGCCTGCTCCACCAGGGCTTCCACATCAATCTCTCCGCTCTCGGTTTTCGGTGCGTTTCTAATCAATTTTCTAAGCCATTCCATTTTGCAATCCTCCATAGATTTTTTATGCTGGCTCTCCCAGCTGGGAGGCCGTTGTTCTTTATGCCTTGCAACTGCTCAAAAAAAGGCGCAAAAAAATACCGGGAGGTTCCCGATGCTTTTCTTATCTATTCTTCCGGGTCACAACTTTCCGGCGGCACGTCGCCACCATCCGCGGTCAGTGGGGGGTCTTTGATGCCAGACGGGCCGGTTAGCTCATCGTCCCAATAGTCGTTCCAAACAACCTCCGTCCCATCCTCCAGGACTACTTTGTTTTCCACTCCTCATACACCCTTTCT # Questionable array : NO Score: 9.00 # Score Detail : 1:0, 2:3, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCGCACCCCATGCGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched TCGCACCCCATGCGGGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.00,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [16.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 153816-153981 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABFCL010000005.1 Bittarella massiliensis strain GGCC_0305 NODE_5_length_170224_cov_623.749314, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 153816 32 100.0 35 ................................ TCGGCGTAGGTCAGGGTGACCCACCGGCATCGCTC 153883 32 100.0 35 ................................ ACAGAGGACACAGTAACCACTCGCGGGAAGGTTGG 153950 32 71.9 0 ....................ACAACC.A..GA | ========== ====== ====== ====== ================================ =================================== ================== 3 32 90.6 36 GTCGTCCCCCACGCGGGGACGTGGATTGAAAT # Left flank : CCCCAGGCGCCGGTTCACTTTCTGGTCGTTCCCAAGGCCCATGTCGCCAGCTGTGACCAGCTGACCGAAGAAAACAGCGCCGTTGTCGCCCACATCTTTGCCACCATTGCCAAACTGGCAGGGGAGTTGGGATTGAAAGACGGCTACCGCATCGTCAACAACTGCGGCAAAGACGGCGGCCAGACGGTGGGGCACCTGCACTTTCACGTGTTGGCCGGCCGCTCGCTGGCCTGGCCCCCGGGCTAATTGTTCTGCCCCCGCGCACATCTCGATTAAAAAGCTGGACGCAGTCGCGTCCAGCTTTTTTGTCCTCTTTTCCCCCAAGTGGCGGGTGCGAACCCCAAGAGAACATCTATCTGCCAGGAGGTTCGCACCGCAAATCTTTGGTTGCTTGCAGTTAAGTGGGAAAGTATGGAAAAAAGAAATTTAAATTTGACAGGATTTTGTGAAAAGGGTATCCTAAATGGGAAAGCAGTACCTTGTTTTTGTGCTGTTTTGCT # Right flank : ATTCAGCGCCTACACAGACACAGCCGCCCCACGCGAACCTCTCATCCCCAAGCGCCCTCCCTCTCAAACACTCGCAGCAAAAGGGAGCCGGAGCAGTATTTGCTGCTCCGGCTCCCTTTTATCCACTTAATCAGCCAATTGCGGTCAGACGATGACGTTGCGGGGTTCTCCCCGGCAGAAGGCGGCGATGTTTTCCCCCAATAAATTGACAAGGCGCTGGCGGGTCTCCAACCCCTTCCAACCCATGTGGGGGGTGAGAATCACGTTGTCCAGGGTGTAGAGTGGGTTGTCTGGCCGCGGGGGCTCCTGCTCCAATACATCCAGTCCAGCCCCGGCAATCTGCCGGGCAGTCAGGGCCCGAATGAGGGCGGGCTCGTCGATCAGGGCTCCGCGGGAGGTGTTGACGAGGAAGGCGGTCGGCTTCATCTTGGCGAGGGCTGCCTGGTCAATGATGTGGCGGGTCTGCTCGGTGAGGGGGCAGTGGAGGGTCACGGCGTCGC # Questionable array : NO Score: 7.89 # Score Detail : 1:0, 2:3, 3:3, 4:0.53, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCCACGCGGGGACGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCCCCCCACGCGGGGGCGTGGATCGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.30,-8.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 80931-81159 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABFCL010000009.1 Bittarella massiliensis strain GGCC_0305 NODE_9_length_93625_cov_650.394721, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ================================= ================== 80931 33 97.0 32 ................................T GGCAGGCGTACCCGAAGAAGCACAACCGGGCG 80996 33 100.0 32 ................................. GTGTAGAGGACGCGGGCACTCTTTCCCAGGCC 81061 33 100.0 33 ................................. GGCAGCTTGGCGTCTCTGGGGTCAACCCAGTCA 81127 33 84.8 0 ..........................CA.TG.C | ========== ====== ====== ====== ================================= ================================= ================== 4 33 95.5 33 GTCGCACCCCGCGCGGGTGCGTGGATTGAAATG # Left flank : AGCCCCATCTCCATAGAGGGGGAGGGGGCGCTGGCCAAGTGCCTCTGCCATGAACTGGACCATCTGGATGGGGTGGTTTTTTGGGAAAAGGCCATCTGTCAGGTCTTTCCCCAGAGGCAAGGGTAGAGGGGCTTTGCAGTTGGAATGGAGAAAAGCGGGTGGACCTGTGGGAGCGGGTCTCCGCTGTGCGGGCATTCCCGTTTAGGACTGACACACCGCGTTTTAACTGCGCCTTTTGTAAAGTCAGAGATAGGGGCGCAGAGGAGAGGGCGGTTTCCCCTCCTTCTTTACAGCCTGACATACGGCACTTTCCTGCCCCTTTTAGGAGTGGTGCGAAGTCCAGGCGGACAGAGACCCCCCGACAGGTTCGCACCGAGAAAATGCCTGGTAGGCGGGCAGAGTGAAAGAGGGGAAGAAATAGCGACTTGGAAATTGACAAGTGTTTGTTGAGAAGGTATATTGAAAGCACAAACAGTGTTGCACTTTTGTGTAGATTTGCT # Right flank : CCCCCCCCCCTTGGCGGAGTTGAAATGTTTGTGTTCATACAACAGCTGTGTGTGGTGCAGGGCATGCCGAGGTGGCCAGCGCTGGCTGGCCTTTTCAAACTTTTACAAGCGTGTCAATGGTCGGCGGCCACAGGCGGAAAACCCATTGACAGATTGATGGGCAAATGAGAAAAAGGAGGCGGATGTGTGAAGAACAAGAGCTTTTTACTGGTGAGGGCCGTCCCCATTTCATTTATCGCACTGCTTTTGGCGAGGACAATGATTAAAGCGCAGGATGTTTCAAGTAGGCTCATGGTCCTGCCCTTCTTAATTTGCAGCGTTGTAGCGCTTTTGCGAACGGTGTTCTTGGCGGTGGGCTGGGAGAGGGCGGCAAAGCTGCTCAACAAGGTCTACGCCGCTGCCTTTTTGCTCTATATATTCGGCTTCTTAGGCGTTTGGTGCTATGTGAGCATCGTCAATCAGTCGTACCTGCCGCTGCTGTTCTCGCTGCCATTCTGGCT # Questionable array : NO Score: 5.64 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCGCGCGGGTGCGTGGATTGAAATG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCCTCGCGGGTGCGTGGATTGAAATA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.50,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 92258-93606 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABFCL010000009.1 Bittarella massiliensis strain GGCC_0305 NODE_9_length_93625_cov_650.394721, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 92258 33 100.0 33 ................................. TTTTCCTGGGGCTTGTGTTTGGCGGTTTGCTGG 92324 33 100.0 33 ................................. GTCTACTTTCCCGGCGCTTTGGGTCGCACCTAC 92390 33 100.0 33 ................................. ATCAAAAATCCGCACAGCTATGCGGAAAAATGC 92456 33 97.0 32 ................................A TGGCCGACAGCTCCCCGATCTCGACGATCCAG 92521 33 97.0 32 ................................A TTTCTTTGCCCTCTTGGTTTTCTTCGGCTTGC 92586 33 100.0 33 ................................. GCTGGAGATTGACGAGGACGTCATCGATGTGGG 92652 33 100.0 34 ................................. GCCGCACCTACAACATCTATTCGGCAATCGAAAC 92719 33 97.0 32 ................................C TCGGCGGGATCGTCGACGGGGTGAAAGGTGTC 92784 33 97.0 32 ................................A GTCTAAGGATGGCACCATCTATTTTGACCTGG 92849 33 100.0 33 ................................. AGGGCTCATGGCTAAGTCTGGAACCGCAAAAGA 92915 33 97.0 32 ................................G GGGACAAGGATTTACAAAGACGAAAGCTCTTG 92980 33 97.0 33 ................................C CGCTGCTGGGGTGTACCTAACACCTGGGAGATT 93046 33 97.0 33 ................................G CAAGACCTATTATAACAGCATTCGTAAGGATGA 93112 33 97.0 32 ................................A GCGGAAAGGAGTTGTCTCAATGCCTATTATCC 93177 33 97.0 33 ................................C ACCTCCTTGACGGCGGTGCCAGACAGCCCCAGG 93243 33 93.9 33 ...........T....................G GTGCTGCTGAAAGAACAGAATCCATTGCGCCCG 93309 33 97.0 33 ...........T..................... CGACAGGTGTAGCCCATGCTCTCGGCGTAGTCC 93375 33 93.9 33 ...........T....................A TAAGCCGTCCGCTTGTTCGTGTAGACTGCCACA 93441 33 97.0 35 ...........T..................... TGAGCAGATTGGAGTTGCCCGCAATGGTGGGGGTG 93509 33 93.9 32 ...........T....................C ACGCCTGCCATCCGCCCCAGCCGGTACGCCGC 93574 33 93.9 0 ...........T....................C | ========== ====== ====== ====== ================================= =================================== ================== 21 33 97.3 33 GTCGCACCCCACGCGGGTGCGTGGATTGAAATT # Left flank : GAGTACACCGGCTTGCGGCCGGGGGAGAAACTCTATGAGGAACTGCTGATGGACGAAGAGGGGATGAAAGAGACCCCCTACGAAAAGATCTTCATCGGCCGGCCGATCGACATTCGGCCCGACGACCTCTGGCGCTCTCTCGATGAAATGCGCCCCTTGGCGTACAACAACCAGTCGGACAAGGTGATCGCCGAGCTGCAAAAGATCGTGCCCACCTTTACTCCCACCCCCAATCAACACAGCTAAAAGAGAAGAGCGGCCTGCCGAAGAGATGTCGGTAGGCCGTTCTTTTGCCTGTGTGGAGGGATGGGAGAAACAGTGCGCCGCCAGTGCGAACCCCAAGCGCACAGGAATTGGCCGGGAGGTTCGCACCAAAAAAGACGAGCATTTTGCCGGGGAAAAGGGAAGAGGGATGAAGAAAGAAAATCAATTTGACAGCATTTTGTGAAAAGAGGTATAGTAGAGGTGTAAATTGACACTGGTTTTTGTGCCAATTTGCA # Right flank : CTTGTAATCGTCACACAGT # Questionable array : NO Score: 5.53 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCACGCGGGTGCGTGGATTGAAATT # Alternate repeat : GTCGCACCCCATGCGGGTGCGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCCTCGCGGGTGCGTGGATTGAAATA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-10.80,-10.90] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-18.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.27,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 226276-226585 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABFCL010000001.1 Bittarella massiliensis strain GGCC_0305 NODE_1_length_469209_cov_615.045301, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================== ==================================== ================== 226276 34 73.5 35 GG.....TAT..C.......C.AG.......... GCTAGCGGTTTGAGGGCAACTTCGGCGTTTTGCTT 226345 34 94.1 34 ....................C.T........... CTGCTTTGGTACATTGCAAGCCGCAAAGGTTTTC 226413 34 94.1 35 .......T............C............. GGCTTTTCCAGCACATTGCCGCCGGTGTAGGTGGC 226482 34 100.0 36 .................................. CTGCGCTGGCAGGCCGACCACTACGGCCAGCTGACA 226552 34 100.0 0 .................................. | ========== ====== ====== ====== ================================== ==================================== ================== 5 34 92.3 35 ATTTCAACCCACTCGCTCCGTGCAGGAGCGAGAC # Left flank : TCCCACGTCATCAACTACGACCTGCCCAACGAGCCGGAGACCTATGTCCACCGCATCGGCCGCACCGGTCGCGCGGGGCTCAGCGGCACGGCGATCTCCTTTTGCATGTTCGACGAAATCCCCTATCTCAAGGACATACAAAAACTCATCAAGCAGGAGATTCCGGTGGTCAAAGACCACCCCTACCCCATGGAAATTTTGGAGCCCACCCCCAAACAGTCCCGGCCGCCCCGGAGGGAGCGCCCCGCCCCGCCCAGACAGCCCGCAGCCAGACAGCCGGGCAGACGGCCCGCGGCCAAGGGAAAACCCGCTGGACAGGGCGGACAGAGAGGGCAAAATCAGCCCCGCAAGAAGAGATAGAAAGAGAGAGCCGGACAGGTGGTGCTGTCTGGCTCTCTTTTTTTGATGGGGAAAAAGGGGAAATGGTCTTAACAGGTGTAAGAGAAATCTGCACGGAGGCGCGGCAAGGTCAAACTGGTATGCCATTGGTCCTTGAAAAT # Right flank : CAGCAAACACCTACAAAAAAATAGGCGTTTCTCCACCACAACAATACAACTTCCACAAACAAATGTCAAACGCCAAGGCCCCTATCCTCCCCTATCCTCCTCTATCCCCCTTTTCCACTGCTCTGCCACCCGGTTTCTCGGTGCGAAGGTCCTGGGAAAAAGGTGCGCACTTTGGGTTCGCACAAAAAGCAGCCCATCCCCAAGAGGGGCGGGCTGCTGAAAGGGGCCGCGCACAGGCGGCGGAGAGTTTAAAAGAAGGTCATCTGGCTGGACTGGGGCAGGTCGCCGAAGGCGCCGCACTCCTTGAGGCTGTCGGCCACCGTCTTGGAGATGCCCGAGCGGGTCTGAATCTCGTCGATGGAGATGAAGCCCCCCTCTTTGATGGTCTCTTCCAGGGCGATGGCGGCGGTGTCGCCCAGTCCGCGCAGGCAGTTGAAGGGCAGCCGGATCTTGCCGTCCTCCAGCCGGTAGTCGGTGGCGCCGGACTTGTAGATGTCCAC # Questionable array : NO Score: 2.59 # Score Detail : 1:0, 2:0, 3:0, 4:0.61, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTCAACCCACTCGCTCCGTGCAGGAGCGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.90,-8.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.68 Confidence: LOW] # Array family : NA //