Array 1 47585-48781 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABWDI010000015.1 Bacteroides uniformis strain A12 NODE_15_length_166137_cov_69.296817, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 47585 47 100.0 30 ............................................... GGAAAGAATTCAGACCGTCCTGCAGAAACT 47662 47 100.0 30 ............................................... AGTGAAAACGTACAGAGTTACAACGTAGGT 47739 47 100.0 30 ............................................... CGTTGTAAAATCTTTTAGCTGCTTCTGCTA 47816 47 100.0 30 ............................................... CAGCGCCTACAGAAAGCCCCGTAACCAGTA 47893 47 100.0 30 ............................................... TGCCCTCGCTATCAAACACCTTGTCTCCGA 47970 47 100.0 30 ............................................... TTTTCACTATCGTACCCCACTAAAATAACT 48047 47 100.0 29 ............................................... AAGAAGAAGAAAAAGAAGCCAAACCAACC 48123 47 100.0 29 ............................................... GGTTGAGTACGGGTGAAATACTCAATGCT 48199 47 100.0 29 ............................................... TAAGTGGTAAGCAGGTTTGTCTGAATACC 48275 47 100.0 29 ............................................... GTAACAGTAAAATGAACATTCCGACGTAG 48351 47 100.0 30 ............................................... ACATTAAGGTGGTGGACATGATAGAAACAG 48428 47 100.0 30 ............................................... TTCTTCGTGCTATTCAGGGAGAATCCGTCT 48505 47 100.0 30 ............................................... AACGACGTTATTATAACACGTTTGAAAATA 48582 47 100.0 29 ............................................... CCGCATTTCCTCAATAATAACGCTTTCCA 48658 47 100.0 30 ............................................... TTCGGTCTTTAGTTCTTGGTTCTCCGTCCT 48735 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 16 47 100.0 30 GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTGGAAACAGT # Left flank : AGTGTTCTGTATGGCAGGGCCTGCTTTCCATATTTCGTCCAGAAACACGACATCGGCTGTGGGCAGATAGCCGTCGATGGCACGTTCATACTTGTCGGATTCTTTCAGTCGGCTAATGCTGACAGGACCGAAAATCTCGTCGGGCGTAGAGAAGCGGGACATCAGATATTCAAAGGCACGGGCATCTGTAAAAGCCGACTTTAGCCGCCTGGCTACCATTGACTTGGCTACTCCCGGAGGTCCCAGGAGCAGGATGCTCTCGCCTGCCAGAGCTGCCAGCAGGGAGAGGTTTATTTCAGTTTCTTTTTCGTATACTCCCCGGTTCATTTCGGAAAGGAGGAGACGAATGCGTTGGGTTATTTCCACAATATGATTTATTTATAGTCAGTACTCATGTATAAAGAAAAGTGTGTAAAGATACAAAATAGTAGGGAAATCAGAGAGAGTCTTATTAAGATTCACTATCTTTGGAAAACAAATACACACAGACACGCACACAC # Right flank : TAGACTATTCATTATAATCTAATAATCAAATGGTTAAACAATCAATTTGAATCACAAAAAGCAAACAGTTTTCCACTAAAAATCCCACCAACAAGTGGGATTTTTACTTTTAGAATAACTCCAACTGTTGCCCCGGTGTATTCACATCTTGAACTTTTTTCCCATAAAAGAGCTCAATATTACCAAATTGTTTGTCCGTAATACATATAATTCCCACCTGTCCAAACTCCGGTAAGAAAGATTTAACTCTTTTTATGTGCACATCTGCATTTTCACTGCTGGCACAATGTCGTACGTAGATGGAAAACTGAAACATAGTAAATCCATCCTTCTGCAGGTTCTTCCGGAAGTCTGCATACGCCTTCTTATCCTTCTTGGTATCAGTAGGCAAATCAAATAACACCAGTACCCACATAATGCGATATTCACTAAAACGGTCCATTACATTTCCGGATATGTTATTTTACGCAACTCTCCATTAAAACATTTATAAAGAGAAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTGGAAACAGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.30,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [63.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //