Array 1 2027041-2025552 **** Predicted by CRISPRDetect 2.4 *** >NZ_UGIY01000002.1 Enterococcus cecorum strain NCTC12422, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 2027040 36 100.0 30 .................................... CGTGGATGCCATGAATAGGGTAAGGTATTA 2026974 36 100.0 30 .................................... CGCTCAATGCACCTAATGCTGTACCGATAG 2026908 36 100.0 30 .................................... TGACAACTCAACATATCAAGACAGAATTGC 2026842 36 100.0 30 .................................... TCTTTTTCGAGGAATAGTATGCCAACGCCA 2026776 36 100.0 30 .................................... CTTGCCTTGACCCTTACAAGTATGATGTAA 2026710 36 100.0 30 .................................... AGAGCAAGCCATTCATCTTTTTGCTCGCCA 2026644 36 100.0 30 .................................... GATGACGACAGCGAAGAAAACTACTACACG 2026578 36 100.0 31 .................................... CCCCCGTTATGTTAGTAGGTCGAGCAGGTTC 2026511 36 100.0 30 .................................... ACAAGAAGTACGGGTTATACTTTGATAGCC 2026445 36 100.0 30 .................................... AAAGTCGATGAAGCAGATATGGTCGAAGCG 2026379 36 100.0 30 .................................... CTTTAACCTAGATGAATATCTTTTAGATTT 2026313 36 100.0 30 .................................... CTATGCAGAGAGCGAGCATTTGAGTGATAC 2026247 36 100.0 30 .................................... AGAAACTTATAAAGAATTTTTTGATATGCA 2026181 36 100.0 30 .................................... ATATTACATGGCACATCTTAAGAAATGTTG 2026115 36 100.0 30 .................................... ACGCTGATGACGCAAACGGAAATGGTATGA 2026049 36 100.0 30 .................................... AAGCAAGCGGATTTTGTGATTAACATCATT 2025983 36 100.0 30 .................................... TTTTAGAAAGGGGATTATTAAACGCCAAAG 2025917 36 100.0 30 .................................... AATTAATTCATTCGGTAAATTCATATCAGG 2025851 36 100.0 30 .................................... AATTTTCTTAGCAAAACCATCGCTAAATGA 2025785 36 100.0 30 .................................... AACAGCGTCATCAATCCAACTTGCACTACG 2025719 36 97.2 30 ..............G..................... AATCGGTGTTAAATTTCAATCCACTCACCT 2025653 36 100.0 30 .................................... AATAACGTGACACCGAGCAATTGCCTATAG 2025587 36 80.6 0 ..A...T.............T.....A.T..T...T | ========== ====== ====== ====== ==================================== =============================== ================== 23 36 99.0 30 GTTTTTGTACTCTTAATGATGTGGTATCAGTAAAAC # Left flank : TGAGCAAGAATTGTTAATGAAACGCTTAAAAGAATTAATGCTTAAGTATAATAATTTTCATGTAATAATTATAGATAGTCAATTATTTGTTACAGATTGTTCACATGAGGATATTGAATCAATTGTTGTTATGAATGAAGACAACATAGATCAACTTCCTCCATATCCTGTAATAAGAAATCTAATAGAAGGGAATTATCCATCAGAGAAAAATTTTTCTGATGAGGAACTTATATCTATGCTTCTTTCAATTGTTCCGATATTAGGCAGTGATAATTATAAAGATTTATCCCCACGTCAACATATTTTTATTAATTTACTTAATTATATAGTGTACGGAATAAAACGAAAAGAATACATTTATGATATTTTAGATCCACTAGAGAAAATATATTTAGAAAGTATAGCAAAATAGTGTTTATTTACTGAAAATTATATGATAATATTCAAATGTATATAACCGAATAATAGCTATATTTTTTGAAAAAATATTATTTGAG # Right flank : AAATATACACCTAATAATTGTTTGTCTTATTTTTATGATCGTGGTATTTTACTTTTAAAGTAGGTTTACAATTATCAAGGCTTTAATAAGTACAATGCGTATCCATAAATGCGTAATTTTCTCTTGATGCATTTATATTTATTGACTGTCATATCTATATAGTTTAACTGAGTTAGAAATCGGCATTGATTTACATCATTCTCAAAGTTTTTGTACCTTGGTGATTTGGTATCGGTAAAAGGACTTTATAAAATTTACTTTTTAGAATAGGTAAATTGTATTTTTATTATTGGAGTGATTGTAAAGGAATGTGGGATTAGGAAGTAAGTAGCAAGAAAGAATAGATTCTGAGTGTAGTAGGTGGACTATTACATTACTAAGGATAGTTAAAGAGAAAAGATGGATTACAATTCTTTGTCAAAAAGTATTCATAAAAGTAAGGCACAAAATAATTATGAAGCAATAATAAAATAATTTTCATTTAAGTATCTGAAAAATTT # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTTAATGATGTGGTATCAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.50,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //