Array 1 219431-219764 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMDV01000001.1 Acinetobacter modestus strain CCM 8639 sequence01, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ==================================== ================== 219431 28 96.4 32 ..........G................. TTTAAAGCGTCGGACTGATGGTTTGGGTGAGT 219491 28 96.4 32 ..........G................. AATAAAATCAGCTTTGCATTGATCAAGTTCAG 219551 28 100.0 32 ............................ AAACAATACGATCTCGTAAAAGCTACCGTAAG 219611 28 96.4 32 .......T.................... TTCATAAACAAAAGCCGCTGAAATAGCGGCTA 219671 28 100.0 36 ............................ ATCAAAGGAGATAGGACGGACTTTAATTTGCCAGTC 219735 28 75.0 0 .....G..T..C...A...T....A.T. | A,C [219753,219758] ========== ====== ====== ====== ============================ ==================================== ================== 6 28 94.0 33 GTTCACTGCCATATAGGCAGCTTAGAAA # Left flank : AGTAAAGGCAATTTGTCTTTGCAGATTACTCATTTCAATCGTATCGGCATCGACAATGGTAATTTTACCTACACCTGCACGTGCCAACAGCTCGGCACTAGTACAACCGATACCGCCTGCACCGATTATTAGCACATTGGCGAGTTTTAGTTTTTCTTGTGCTTCGATATCCCAACCATCTAATAAAATCTGACGACTATAGAGATGCATTTCCTCGTTGCTTAGCTCAAATTCATTTTCTAAATGGTCTGACACGTGACTTGCTTCTTTATCATCAAAAGTGTTCATGATTTTAAGTCTATGTAGGTTCTGAGGAAAGTAATAAATTAGAACGAACACTTTTTTCTTTTGACAAAAAGCTATTTTTACCCCAATATTTTTCTTACTCTTTAACAGCTTAATAAAATCAATAAGTTACAATTTGGGTCAAAACTTTGGGTATTTACCCAATTTTCTTGATAAATCCATGTTTTAACTTATTTTATTTACTCTATTTTACT # Right flank : ATTCATCAATAAGAATTTACTACTGATTTAATTGGATGCTCTCACCAAAATAAATAAACTTCTAAAATGATATGCTTGTAGATTTTATAAAAACAATTTGTTAAATTGCATAAACGAATATTTATTGGATATATTATGAGAAAAAAAATATTAAAATCCGCTTTTGCTTTAATGATATTAACAACATTAAATTTAAATGCTTATGGAAATATTTATATCTCTATTCCCTCTTTTAAAAAACCTAAAATTTCACCTTTCACCAAAGCACAAGCTCTTAAAACTGATGAGTTTGAAACATCAACAAAACAATTATTGGAAGAAGGTTACATACCAATTAAATCGCAAACTTTTAATGGTCGAGATGATTTTCGAGGATATGAAAATGTAGTTGCTGCTTTAGAAAAAAGGGGGGATAATCTAGGTGCTCAAATCGTCTTATTTACAAATGAAAAACCAACTGGACAAATTGGCTACTATAATTTTTCAACTCCATTTGTATA # Questionable array : NO Score: 5.87 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATATAGGCAGCTTAGAAA # Alternate repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCACTGCCATATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-1] Score: 0/0.41 # AT richness analysis in flanks prediction: F [80.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 568506-573033 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMDV01000001.1 Acinetobacter modestus strain CCM 8639 sequence01, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 568506 28 100.0 32 ............................ ATTTCAGTGATCAAGAAAGATTTTCCTTGATC 568566 28 100.0 32 ............................ AAACTCATCACGGATTTTCGCTACGCTGGCAT 568626 28 100.0 32 ............................ ACAAACATTGGCTCGCCCATCTTCAGGACAAA 568686 28 100.0 32 ............................ AATATTTCAAGAGCCAAAGCCCATGCTTGTTG 568746 28 100.0 32 ............................ ACTTTGGATTGTTGGTGTTGGTAGGTCATATA 568806 28 100.0 32 ............................ TTGAGCGAATCGGCAACCATTACAGGGCGACT 568866 28 100.0 32 ............................ CTTTGCGTCTACCATAGACACGCCAAGCGTAT 568926 28 100.0 32 ............................ ACTGGATTGCGTGTAATCTGCAATATTATTAA 568986 28 100.0 32 ............................ TATCAATACCCAAATAATATACTATCAATATA 569046 28 100.0 32 ............................ GCAAAAGCTGCCCAAACCACAAGGAGCAACGT 569106 28 100.0 32 ............................ TTTCATCATTTGAACGACAGCTTGGGCAGGAT 569166 28 100.0 32 ............................ TGAGAATAAAAGCAGAGCAGTCGCTCAAATAT 569226 28 100.0 32 ............................ AGTTGGCGCTGAGTGTTATTCATGGTCACTTG 569286 28 100.0 32 ............................ ACGTTTAAAGGCGCATTTGATTCTTCAAGCAC 569346 28 100.0 32 ............................ GTAAGAAGCTTGCCAACATATCGCTCGTTTAT 569406 28 100.0 32 ............................ ATTAATGCAGGATTTAAACTAAATGAAGATGT 569466 28 100.0 32 ............................ CAGCGTTTATGAGTGTCGAGCAAATCAGAAAG 569526 28 100.0 32 ............................ CCTCATTGTGATGTTTGCGCTGTGCTAAGGCG 569586 28 100.0 32 ............................ GATTAGCGGCGGAAAGGACTCGCAAGCATGTT 569646 28 100.0 32 ............................ CAGAATACAGCAGACTATTTCGCTCTGTTAAT 569706 28 100.0 32 ............................ GTGTTGAAAAGATCATTACGACCTATCAAAAG 569766 28 100.0 32 ............................ CAGCACATACACAATTTTATTTTAGTGTTGTT 569826 28 100.0 32 ............................ ATTAATGACTGGGCTTGGCGAAGTGCTATAGC 569886 28 100.0 32 ............................ ACCCATTCTTTTTCCCGACATAGATCAATATT 569946 28 100.0 32 ............................ TTACTAATCCACGCTTCTCCAACTGACGAATA 570006 28 100.0 32 ............................ AGTGGATTTTTTTTTGTCAATGATGCGAAGAT 570066 28 100.0 32 ............................ TCAATATCAGTCGGAAATTTCAATGTTTATGC 570126 28 100.0 32 ............................ TCAATATCAGTCGGAAATTTCAATGTTTATGC 570186 28 100.0 32 ............................ AAAAATCTGCACCCGCCCAACGATCAGCCCGT 570246 28 100.0 32 ............................ AAGTCACTGTACGCTCAGTCGGTGCGGCAACT 570306 28 100.0 32 ............................ ATGAACTGCTTTCTTTACAACATCCAAGAAAA 570366 28 100.0 32 ............................ TGGTCAGACATGGCGTAATTAGGTGCATCGAC 570426 28 100.0 32 ............................ TGACTTGCGAGGCGAGTTTGTGCGCGGTTGGG 570486 28 100.0 32 ............................ TCTCTCATTGAATTTGCAGGGGACATCAACGC 570546 28 100.0 32 ............................ ACGACCAACACCAAGCAAGTTTTTAAGACCAT 570606 28 100.0 32 ............................ TAAAGCAGCTCCAATATCAAGTGGTAATTTAT 570666 28 100.0 32 ............................ CTAATGTAGTTTGGTCGCCAAATGTTCCATTA 570726 28 100.0 32 ............................ ATTTCCATACAATTTGGGTGCTATGGCAACAG 570786 28 100.0 32 ............................ TTCCGAAAATAGAGGCATAAGGTTTGTTAAGT 570846 28 100.0 32 ............................ AGAATCATCAGAAACAACTCCACGACCAACAC 570906 28 100.0 32 ............................ ATTAATTGACGCCCCGCTTCGTAAGTGCAACT 570966 28 100.0 32 ............................ TCCTGCCTGGCCCGCTTGGATGTGGGCTAACC 571026 28 100.0 32 ............................ GAATGGACGTGTTAAATGATAATGCTCACCGA 571086 28 100.0 32 ............................ AGTTGTCACTCAAACAAATTTAGATGCTTATC 571146 28 100.0 32 ............................ CAATCTGAATTTGCATAAGCAGCATCTTCTGC 571206 28 100.0 32 ............................ CCTAGCAAAGCTGTTATATTCATGCTTTAATC 571266 28 100.0 32 ............................ CATCATTCCAGAGCTTACAAACGAGCAGATCG 571326 28 100.0 32 ............................ ATTCCTATTAGTTTAAAGAAAGCATTAAAAAT 571386 28 100.0 32 ............................ TTCTTGGCAATTCCATAACGGCGTGATTCAAC 571446 28 100.0 32 ............................ CATGTTAAAGACAGCTTTAAACACAATGACGA 571506 28 100.0 32 ............................ ATTATTACAATTATCCTAAGTTATTGATTTTT 571566 28 100.0 32 ............................ AAGCGGGCGCTGCAAATCCTGTTCAGTGGTCA 571626 28 100.0 32 ............................ ATCCATCCGTACGTAAAGATCTATAGAAATCC 571686 28 100.0 32 ............................ TGTTCAGTGGTCATTCAAGAACATCGCTAACA 571746 28 100.0 32 ............................ TTGATCATCTGAAATACAAACCTCACCTTTTT 571806 28 100.0 32 ............................ TTTCCACATTATGCAGCCAGAAATTTGCTGTT 571866 28 100.0 32 ............................ TCAATTGCGGGTCAAGTTCTTTTTTCACTAGG 571926 28 100.0 32 ............................ AGCTAGATAAGATTCAAAAGCAAGCAGACAAA 571986 28 100.0 32 ............................ GCTAACAAGGCAAGAAACTACACATACCGTTT 572046 28 100.0 32 ............................ GATAAGAAAACCTGCTCTTTTTAAACCCCAAG 572106 28 100.0 32 ............................ TCTGTAAACAAGTCATACAAGACGCTGATCGC 572166 28 100.0 32 ............................ ACCACCTGAAAAAGTCGTCTTTTCAAGAAATG 572226 28 100.0 32 ............................ TCAAGAGGTTTCAGGATCTCGCTGTTTTAAAA 572286 28 100.0 32 ............................ GTTTTCGTTGTACAAATAATCCCACTGGAGAG 572346 28 100.0 32 ............................ TATTTGATCGTTCGTTAATTCAGGAATGAGGG 572406 28 100.0 32 ............................ TGGTCTGAAAGCCTTTATTTACGGGCATGGAC 572466 28 100.0 32 ............................ ATACTTTCAACTAGGCGCTTGAGGTCATTAAG 572526 28 100.0 32 ............................ CCGACCTTAAACATGCTCACCTCATAAAGAGG 572586 28 100.0 32 ............................ AGCAATTACACTAAAACTCATTGACATCGTGG 572646 28 100.0 32 ............................ ATTTCAGCTATTCCCTTTGGCCATCCATCTGT 572706 28 100.0 32 ............................ AACAGCAATCCCTCCCACTGTTGCTGTCAACC 572766 28 100.0 32 ............................ TTGCATAGCAAGAGTAGATACCTTGTCAAACT 572826 28 100.0 32 ............................ TTAACACGCTGAATAACTTGCTGTAATGCCAA 572886 28 100.0 32 ............................ CTAAAGCCTACGGCAAATTTGAAGAAGTCAAA 572946 28 100.0 32 ............................ TGAATTGCAGCACTATTAACATTAAAAAATTC 573006 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 76 28 100.0 32 GTTCATCATCGTGTAGATGATTTAGAAA # Left flank : CCGTTGGGCCAAAGCGTTATATAAACAACTTGCTAAAGGTTTTGGCCTTGAGTTTACGCGTGATGAAGGAAAAAACTCTCACGACACTATTGCTGATATCGCCAACAGCTACCTCGATCATGGTAATTATATTGCCTATGGCTATGCAGCAGTGGCTTTAAATGGCATGGGAATTAGCTTTGCTCTCCCTATTTTGCATGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCTGATCTCGTGAAAGATGCTTTTGTGATGCCACTGGCTTTTATATGTGCCGCAAAAGGATTGAATCAAAAAGAATTCCGAACGCAGCTTATAGAAATCTGCCAAGATCAAGATCTTTTGGATTACATGTTTAGCTTCATTACGGACATATGCAGTAAAATCAAATAAAATCATAAAATTAAGATTTATACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : AGTAATATTATGAAAAAACCGACTAGATTACCCTACTGTGCATTTTGAAGCTCCACCACGAGATGGTTTAGAGCAACGTTTAGATGAATTTATCCAGTGGTTTAATACCAGCAGAACCAATACCCTGCTTGATCCACTGATTCGGGCTGGAATAACTCACCTGGTTTTTTTGACACCCCACCCTTTTGATGATTGTAATAGACGTATTACACTTACACTGACTGACTTAGCTTTAGCTCAAATGGATCAACAAAGTATTCGTCTATATGCGATGTCACCTGTCATTTTAAATAAGCGTAAAAGCTATTATGAGATTCTTGAAGCAACTCAAAAAGGTGGTTCTGATATTACAGCTTGGTTGCTTTGGTTTTTACAAGCATTCAATGACAGCCTTGAACAGACATTAAAGCGTATTGAAAGGACACTTTTAAAAAGTACATTTTGGCAGATTTTTTCGGAATTGGATTTGCATGAAGGACAGCGCAAGGTTTTAAATAGGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATCATCGTGTAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTCATCATCGTGTAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [81.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //