Array 1 403-735 **** Predicted by CRISPRDetect 2.4 *** >NZ_MJLH01000003.1 Campylobacter sp. P162 ERR473919.12448_4_67.3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =========================================== ================== 403 32 90.6 43 A...............C.......A....... GCGGTATGTTTGCTGGTGCTGTAAATTTTAACTCAGATATATC A [405] 479 32 100.0 43 ................................ ACTTTATGTTCACTGGCGCTAAAAATTTTAACTCAGATATATC 554 32 100.0 43 ................................ GTTTTATGTTCAGCGGTGCCACTAGCTTTAACCAACCGCTAAA 629 32 93.8 43 ..A.........G................... GCGGTATGTTCAACAATGCCACTAGCTTCAACCAATCGCTCGA 704 32 90.6 0 ..A....................AG....... | ========== ====== ====== ====== ================================ =========================================== ================== 5 32 95.0 43 TAGCTGGGATGTATCTAATGTAACTAATATGA # Left flank : ATCTAAAAAACAATATAGAAGCCGAGTTTCAAAAAGCCAAAGCAAGTATCAAAAATCCATTTTTAAGCCAAAGTGATATAGAGTTATCGCTTAGTAGCTATACTCTACCACTCAAAGAGATTAATAACGAAATTCTAAAAGCCAAAGAGTTAGAAAGTAAATTTGATACCAACTCAAAAACCATAGAAGAGCTTAGAGCGGAGCTAGTCACCAAAATGCAAAACCGAATATCCCAAAAAACTTCAAACCCAACCGAGTATAAATACCACCCAGAAACTAAAGAAGAGCTTAGAAAGCTAGTCTTCCGTGAGAGTGTAAAGCTAAGCGAGATAGATATAAGCAAAGTGAGTAATTTATCTAATTTATTTAATGGTAATAAAAGAAGCGATTTTAGTGGTATAGA # Right flank : AACAATATGTTTTTTAGTGGAGCTGATGTTGTCAATACGCTTGCTACTGGTCTTTTTAGTGCTTTTGGTGCTGCTATGGGTGCTGGTGCTAAACAACAACTACCAAATAAAAAACGACTACCAAAATGGTATAAAGAATAATCAATAGGAGAGACAATGCAAGAACTACAAATAATAAACGAAATTTTATCAGCCAAGCCAAACAATCAAACTCTAAGCAGTTTCAATAAATATCTAAATAACTTTTATGATATTACCAAAAAAATAGCCGTAGAAAACGAAAGAGATTTGGTATTAAATTTAAAAGCTATTGAGAGTGAAATGGCTATTATCGCAGCTTATGCTGAGCTTTTCTCAAAGCATGTTATAGCAGTTGGCGGTGGATTTAGCGCAGGTAAATCAGCCTTTGTAAATAGCTTTTTAAAATCAAAAGATATCCAACTACCTATCTCTATAGACCCTACAACAGCAATACCTAGCTATGTAATGTCAAGCGATAA # Questionable array : NO Score: 2.53 # Score Detail : 1:0, 2:0, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TAGCTGGGATGTATCTAATGTAACTAATATGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.75%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [4-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 1 98826-99123 **** Predicted by CRISPRDetect 2.4 *** >NZ_MJLH01000002.1 Campylobacter sp. P162 ERR473919.12448_4_67.2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 98826 36 100.0 30 .................................... TTTGGATTGCGGATTAAAGCTAAAAAATAT 98892 36 100.0 30 .................................... GAAGTAGCCAAAGCCCTAGCTAAAAAAATA 98958 36 100.0 29 .................................... CTAGCTAAAGCGATTAAATACGCACTAAG 99023 36 100.0 29 .................................... ATTTGCTTCAATTCTAAACATTTACCACA 99088 36 97.2 0 ...................................T | ========== ====== ====== ====== ==================================== ============================== ================== 5 36 99.4 30 ATTATAACATATAGAAACTAAGGGGGTTCTTATAGC # Left flank : CGTATTATGGTTATGTTTGATTTGCCAGTAGGGAGCAAAAAAGAGCGAAAAGAGGCTGCTAAATTTAGAAGTTCTCTTTTAAAATGTGGATTTTTTATGTTGCAATTTTCTGTATATGCTAGAATAGTGCGTGGATATGATAAGGCTGAGGTCATTACTAATAAGATAAAGTCTAAATTACCTAGCAAAGGAAATGTACGAATGATTACAATCACCGAAAAGCAGTATGCAAATATGGTAGTATTAAAAGGCGAACCAAAAAACTCTACAGAGAAACTAAGCTTAGAAAAAAGCTTATTTGAATTTTGAATATTTTGCCAGGATATACCTGGCAAATGGTTACGATCTAAAAAGATCTTATTATAAGAATGCCCTTAGTTTTTATATGTTATAAGATATGTTATAAGATCTGAATTATACAGTTTATTGATTTAAAATTTAATTAAGATATTAAAATTTAGATCAAAATACCATAAAATCATATCTATAAGAGGTTTCTA # Right flank : TTTAAATTCAAAATTGGAACACAACTTGCTTAATGCTTATAAAATTAACGCAGGAGCGATTATGCAAAATGGATATTATCAAGCAACTGGTGCAATGGTGACTCAGTTTAACCGCTTAGATATCATTACTAATAACTTAGCTAATGTAAATACTAGCGGATATAAAAAAGATGATGTGGTGATAGCTGATTTTGAAAGAATATTTAAAGAGACAAAGGATGCTTTACCGCTAGAAAATCACACTAAAGATTCAGCTAAATTTTTAAACCGCACATTAAATAGGGTGCCACATATCAATGAGGTTTATACTGATTTTGGCACTGGTGGGCTAAAGCATACTAATAATCCGCTAGATATATCACTTGGCAAAAATGATCTATTTTTACTAGTAGATAGTCCATCAGGTATAAGGCTGACTAAAAATGGCTCACTAAATTTAGATAGCGAAGGGTATTTAGTTACAAAAGAGGGTTATAGAGTACTGCCTAGCAACTATGCTG # Questionable array : NO Score: 3.03 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTATAACATATAGAAACTAAGGGGGTTCTTATAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //