Array 1 32550-32982 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSFT01000025.1 Phocaeicola coprophilus strain AM42-38 AM42-38.Scaf25, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 32550 46 85.1 30 .A.A.......G......A...-.......A.....C.......... CTTCGGTATCTAATAAGTTAAATGACTTTT AC,A,G [32558,32561,32568] 32630 47 100.0 30 ............................................... ACAGGTTCTCCGCCAGTCCCTGACTGAACA 32707 47 100.0 30 ............................................... ACAGGTTCTCCGCCAGTCCCTGACTGAACC 32784 47 100.0 29 ............................................... TTCCTGAACGGCTGTTTTGCCGGTACGCA 32860 47 100.0 29 ............................................... AGTTTGTTGACGATGCGAAGCAGAACATC 32936 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 6 47 97.5 30 GTTGTGAATTGCTTACTTTTTAGTATCTTTGAAACATTGGAAACATC # Left flank : CACCGTGAAGACTGCCAGCGTAATCACTTCCTGAATGACCTTCAGCTGCATGATGTCGAAAGGTCCCCCACTGTCGCGGAATCCCAGACGGTTGGCCGGAACCTGCAGACAATATTCAAAGAAAGCAATCGCCCAGCTGAAGGCAACAACTCCAATCAGCGGCAATGCAGCAAACCAGCTGAACTCTTCACGCATCTTCAGATGTCCGTACCAGGCAAAAGTCATGAAGATATTCGAAAAAATCAGCAAAACAATCGAATAAATACCATTTGTCAACATATCTTTTTTCCTTTATTTAAAAACCGGCGCAAAAGTACAAATAAAATGTGACAAAGCGAAAAAACCTCCTCCTAACATATCATTGTTTATTCATTAACAAACCATTTTTATATTTAAGGCCGCTAAAAATATCATCTTACTCAATACATAGTTCATAATATCCTAATCACTTTAGTAATGCTCTAATTATTAAGCGCATAGATACTACAATAGCAATTAAA # Right flank : CTGATTCTGCATTATCCATTGTAAGTCAATAATTTACGCAGAGATTTAGAAAGTCCAAACGAACCTGTTTCCAATAGAAAATCCCGCCATACAGCGGGATTTTTCTTTTCATAATAAAGTCACAACTGGGAATTAATTCTTATTACTAAAAATAATTTTCCCATCAAGAGTTATCTTAAAATCTATGTCTTCAAGAAGATAGTTCAATTGTCTAATACTCTGTCGTATCCTTTCAGGAAGACCATTATCAAATAATTTTAAATCAACGGCTTTACCTCTACCTGTTTCTTTGAAGGATCTGGAACAGAGATGTTTCTTTAAATTAACAATATTATCACCTTCAAATCTTTCAATAACATATAGTCTTTCAGATAACAACTTAATGTTTAATGGCTTTCTCAAAAGATTATCACAGTCGTTTTGATCTTTGTAAAGAATCACTTGTTTTCCAGGACGCAAAATAGTATCCAAATAATATTCATCATCTAGAACTTCCTGTA # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTACTTTTTAGTATCTTTGAAACATTGGAAACATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.21%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.30,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [75.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA //