Array 1 9291-10048 **** Predicted by CRISPRDetect 2.4 *** >NZ_KZ821208.1 Bacillus sp. CGMCC 1.16541 Scaffold14, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 9291 32 100.0 33 ................................ ATTGTGGTCAAAATGTTGATATAAAAGGGTTTT 9356 32 100.0 36 ................................ AATTACTTTTGCCATTAGCTGGTGCTATTGTGGCTG 9424 32 100.0 33 ................................ CTTTGGATACTCCATCTAATTATAAACTGCCTA 9489 32 100.0 36 ................................ AAAACTCCCGTTACTTTCTAATAAATCCCAATATAA 9557 32 100.0 34 ................................ AAGAGCATTAACTGATGATGCTGAGGGGCTTAAA 9623 32 100.0 34 ................................ AGATGTTTACTGATATGTTTCGTATGTTTACACG 9689 32 100.0 33 ................................ TAACCTTTTATCATCATCGTTTTTTCATCGGAA 9754 32 100.0 33 ................................ TTTTCCTTGTTACTCAAAAAACTTTTAGGAAAA 9819 32 100.0 34 ................................ ATTTCGTTGTACGATTGGTTTATCGCCTGGTCAA 9885 32 100.0 34 ................................ CCAACTAGATAATGCAGATGTGAGATACTTATTG 9951 32 100.0 34 ................................ CTTCAACTGTCTTTGAGCGCACCGCCTCATATCC 10017 32 93.8 0 .....................C......G... | ========== ====== ====== ====== ================================ ==================================== ================== 12 32 99.5 34 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : AAAGATATCATTGCTGAATTAAACAGCCAAAGAACCATTGCTGAACTTTCAAAACTATTAAAAAGAGCACAACAATATACAATTAATATTTACCAACACGAATTTCAACATCTATCTCAGCAAGACGGAATTGTAAGTTATCTAGATGGCAACCTTCTTGTTTTAAAAGAAGGATCATACAGTAAAGAATATGGATTGAATTTAGAAAGTGATAGTGTAATGGAATTAAACTTTTTTTAAGTAGAGTAATCTGTTGAGTACGGAAGATAAAACTTGTTGTAATACAGGAAAGTGATTAGTCTATGAAGAAATGTACTTTATAGACTAGTGGGTGCGAATGTGAAGTGCACATCATTTTCTAGGGACATTCGCACCTCATGATTTGTAAATAATTGTCGAGTAATCTTCATTTGAACATTTTGTTCTTTACTTTAGTAAAGAAAATAGTGGTTTATAGGTGAAAGTATGTACTATGAGCCTATTTTTATCGATAAATCGCT # Right flank : TTTTGACTATTACAATCTGTTCAGGTTTGATTGAGGTTGGTACATAAGTTAATAAAACTAAAAAAGAACGTGTATATGCAACAGCCCGTGCTGTTGTGGGCTGAGCTAAACAGGGGTGCTCTTTATCCCTTTTGGCCCAGCCCTAGTCGAATCATTTATAATCAAACCTCTATCCTTTTAGTGGTGTGTTCCATTTTTACAAAAAGACACCCGATCATTTCAAGTTGTTTGTACAACGATGATCGGGTGTCTTTTTTGATTCAGTTAATCATATACTATATTTTTCAATCCGCACTTAGGTAAGTGACAATTTATTATAGCATATTCTTAAAAGTTAACAAAAAATTCATATAATATATTATTAAAAATATTTACAAAATAAATGGTAAAATGATACCGTTATTATGGTAATATTTTCATATAGAGGAAAGGAGGATACGATGAGAAATTCAATTGAATTTGAAGTTTTCGGTAACTATGCATTGTTTACTGATCCGCTC # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 16101-16658 **** Predicted by CRISPRDetect 2.4 *** >NZ_KZ821208.1 Bacillus sp. CGMCC 1.16541 Scaffold14, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 16101 32 100.0 34 ................................ CCGTGAATAGTTCCAATTGAACTGGCTGATAAGC 16167 32 100.0 35 ................................ TTCAAAAGGTCATCATAGTTAGGCAGTTTATAATT 16234 32 100.0 33 ................................ GTCAAGGTTATTACGGTGGGCGAACTGAAGTAT 16299 32 100.0 33 ................................ CTTTTGATTACTCATTTTACTATTGTTACAATC 16364 32 100.0 34 ................................ TCCTTTTACGATTGACGGTGCAGGTCTAGCTCTA 16430 32 100.0 34 ................................ CCAATCGCACATGTCTTCTTCGTCTTCAATTTCT 16496 32 100.0 34 ................................ TGATAATTTAACTGGAAGGATTTTCACCTTTTTT 16562 32 100.0 33 ................................ ATAATTAATTTTCATTTTTCATCGCTCCTTTTT 16627 32 84.4 0 ................A.AG..A........C | ========== ====== ====== ====== ================================ =================================== ================== 9 32 98.3 34 GTCGCACTCTATATGGGTGCGTGGATTGAAAT # Left flank : TAGACGAATACCCACCGTTTTTGTGGAAGTAGGTGGATAAGTTGCTGGTATTAATTACATATGATGTAAACACAACGAGTAGTAGTGGACAGAAACGATTACGCAAAGTGGCTAAAGTGTGTCAAAACTATGGTCAACGAGTACAAAACTCTGTCTTCGAATGTGTAGTAGATACTACGCAATTTACATCTCTAAAGCTACAATTATCAAGTATAATTGATGAGAACACTGACAGTCTTAGATTTTATCAACTTGGAAATAATTATAAAAATAAAGTCAGTCATATTGGATCAAAAAAATCAATTGATATAGAAGCGCCATTAATTTTTTAGTGCGAATATAAAGCGCACATGATTTACTAAGGGTATTCGCACCTCATAATTAGAAGAAATTTGTCGATTAATCTTTTGTCAAATACTTTGTTCTTTACTATTGTAAAGAAAATAGCGAAAACTTAGATGTAAATATCAAACCTACCCGATATTTACCTGAAAATCGCT # Right flank : CAAATACTTGAAAACAGGTCTCTAGTTTAGCAGCATTCTTTGGGAATGAAAGCAGCTGTTTTATATAGTTGTGGCATGTATTTTAGATAAAGAAAAGACAGATGGGACTGCAATATAAGCTCTACTATACAAAGAGTTTGCATTGATAGTCCTATTTACGTAACATAAAAGTCACTCTTGTTTATCGTTAAAAGTAAGTATCACTTTACATCACATGCGTCAAAATCTTGCAACCTTGAATCGTTTTTAACGCTTCGCGTGCTTCTTTTTCTGTTCTAAATTCAAACATCTTAATCTCCTTTTTTGAGTAGCCTGTAATAATCCACATTTTTCATTCCTCCATTTGTTTAGAAAGCTTCATCATTTCCAGATGATTGTATCTAACTCTATCCTCTAAAGTGAGAGGCATGAGCAACCTCCTCTGCAATAGCAGTCTGATATTTTGTACAAAATACGAAATCCTTGCACCGCTAAAGCGTTCACTTTTATATAATGCAAGT # Questionable array : NO Score: 9.17 # Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //