Array 1 625483-626790 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP065628.1 Corynebacterium amycolatum strain FDAARGOS_938 chromosome, complete genome Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 625483 28 100.0 33 ............................ TGTGCTGCACAACAAGGCGGTTATTACGCGGGC 625544 28 100.0 33 ............................ GCATTGGGTGTTGCGTGATGATTTTCTTCGTCT 625605 28 100.0 33 ............................ GCGATTAAGAGCATTGACTAGAGGTTTGCCCCT 625666 28 100.0 33 ............................ GCTTGAGGACCGGCTCGATAGCGTCGAGAGTCG 625727 28 100.0 33 ............................ CGGAGCCTCCACCGAGCCGAACAGCTGCTCGCC 625788 28 100.0 33 ............................ GTTGTACACATTGCCCATCTCGGATGCCGCAGT 625849 28 100.0 33 ............................ GCCCCTGCAGCAGATTTTTGCGGGGCTTCGTCC 625910 28 100.0 32 ............................ CGGGCCTGCAAGCGTCGCACCAAGACGCCAGC 625970 28 100.0 33 ............................ TTAATCCGCTTCACAATCCGGTCACAATCCCGC 626031 28 100.0 33 ............................ GAATCATGGTCAGGGTCAGGCTCATCCGTCGGC 626092 28 100.0 33 ............................ TATGTCGCTTGCTGATGAGGTTAAGGAACTGAC 626153 28 100.0 33 ............................ GGACGGGTCGGGACGGGTCGGGACGGGACGGGT 626214 28 100.0 33 ............................ GGACTCTGACTGGATTCCTCGCAGTGCAGTGAG 626275 28 100.0 33 ............................ CCGGCACCAAAACTGCAATCCCCAAAGGCCAAG 626336 28 100.0 33 ............................ GCTTCCCGGTTTTCACGTAAACGTCGTGTGGTT 626397 28 100.0 33 ............................ CCCAGACGAGGAAAATATGCTGCCCCGGGACTA 626458 28 100.0 33 ............................ GGTCAAGGGTCATCAGCTGCGCTGTTGCAAAGT 626519 28 100.0 33 ............................ CTGGGCGAGCGGTTCGGTGCTGGTGTCCAATCC 626580 28 100.0 33 ............................ GCACGGCCCGCAAACGCGCCACCTGCCCACCAA 626641 28 100.0 33 ............................ GCAGCACCGTCAGCGGAACCCTCGGCAGCGTCA 626702 28 100.0 33 ............................ CGACCTCACCGGCAAGACGCAGACGGTCACCAG 626763 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 22 28 100.0 33 GTTTTCCCCGCGTGAGCGGGGATGTTCC # Left flank : AAACGAGGAATTCGGTGAAGTTATCGAATTGTGGGATTACAGCCGCGGCACGATTAAAGGTGGTACAAACTACTCCTCCGGAGAACCACCATGGTGACAATAGTTTTGACGAGCTGTCCTGCCGGATTACGGGGCCATTTAACTCGATGGCTTGAGGAAATCGCCCCAGGTGTATTTGTTGGGAAAGTTAACTCTCGTCTCCGTGACATCTTGTGGGGCCTGGTCATCGAAATGGTCGGCAGTGGTCGTGCCATAATGGTTTATCCGGATCGGAATGCCGAACAAGGGTATGCCTACAAGGTGCATCGTCACGACTGGGAGGTCGTCGATGTCGAGGGGCTGTCCCTGATCCGGCGTCCGTTCAAAAACAGGACTAAAGGTGATGTCGGATTAAAGTCGGGATGGTCAAATCCGGCTAAACGGCGTCGTGCCCGACATGCTCGTCGTTCGGAGTGATATAAAATTCTTCATCGGGAACCGAGCTCTGCTGGTTAATAAGT # Right flank : CGATTTGATTATGAGGGGGATAGTATCCCCGCGTAAACACTCAGAAGGGTAAAGGCATGACGAAGTATTGGGATCACAACGGCAGTATCTACAAAGACGACGGCCAGGAAGATTGGTGCGTTTACAATCCGTCTTTGCGTGATTGGGAGCGCACCCCGCGCGCTAAGGAAGCCTACGACAAGGCAGGCCAAAACTCGTTCGACCCCATCACCGAGCAGCAGGCACTCGTCGATATTGCAGAGCAGCAGGAACGCTACAACAAAAAGATTCAGGACAAAATCAAGGAACTGCGCGCGAAAATGAAAGCTGTCGGTGCGCAGGCCAGACAGGCTGCTGAACAGCCGTACCCAACCTTTGCCGAGCAATCTGCCGCATACCGTGAGGGTGCGCAGGCCTACAACGAGGGCAAATCTTGGCGCGATAACCCGTATGCCCCCGAGTCAGGTCTAGCCACCCCGTGGCGCATGGGGTTCAATACCCGCAAGCAGCAGGTAGCGGAG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCGCGTGAGCGGGGATGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 2 876336-876126 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP065628.1 Corynebacterium amycolatum strain FDAARGOS_938 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 876335 28 100.0 33 ............................ TCGACTGGGGAAATTCCCCAGTCGGAAACGAGG 876274 28 100.0 33 ............................ CCTTTATCAGGGTGGTCAAATTGACCACCCTGA 876213 28 100.0 34 ............................ TCAGCATTGCCGTGGGGTGGCGATTCACCACCCC 876151 26 82.1 0 ...........GA.....--...A.... | ========== ====== ====== ====== ============================ ================================== ================== 4 28 95.5 34 GTAAGCCCCACATGCGCACGGAAGCTAA # Left flank : GAACGCCGCGACCGCATCGGCCACGAAACGCACAACAACCAGCACTAACAGACCCAGGGGAGCACCCCCTCCCCCAAGGCTTCTGTCGCCCGGAAGGCAATGACGCTCCGGGTGCGCCTGGGTCAGGGATTTTCGAGGGAAGGTTTTTTACATGGCGGACATGAATGCGAAGTCTGATTATGAGGCTGCTTTGGTGGAGCAGATTGGTCAGTTGTCGGAGACGATTGGTGTTTTGTCTGAGGCTGTTCGGGAGTCGCCTTTGGTGGTTGGTTCTCGTAAGCAGCCTGTGGTGAATCCGGCTGCTCGGGAGTTGGCTGGGTTGCATCGGACGAAGGCTGATTTGGAGCGGAAGCTGCTGAGTTGCCGTAATCCGTTTATGCGGGTTTAGGGGGTGTTGCAGGAGGCTCTGTGAGCGGTTGGAGGGTGTTAGGGTACGTGCTCCCGTCGTTTAACCGCTTAGAATCGATTTGCGAACAGGGGGTTTGCGCAGGTCAACGAGG # Right flank : GGTGGTAGTGATTCACGATCCCCTTACGGTCGCGCACGTCTCCACGCGCACGGGCATGATCTTTAGGTCGTGATTCCGACCTGCCAAGCAGCGTTACACTTCAGCATCTTCCCAGTGAGCTCGACTGCAATATTTCACTATAATTTCACTATTGCAGTGACTCTAGACAACATTGCCAACATGTTAAACGCTTTTGACCAGCACTGTTAATCATTGCCAACATCATTAGTATTCATCGTTTGCCCAGTTAGCATAGTTCGGGACGAAGAGGCCGTGGGTTCAAATCCCGCTACCCCGACCATTTAGAACAGGTTGGTGATTTGCACTTTTCAGAAGTGTGGATTGCCAGCCTGTTTTTCTATGCGCATCCTGTCACCCGTTTGTCACCTATTCATCCGTTCATATGCTGCCAGGTCGATTCCCATCCCCGAATAAGTGGCGTGAATCGCCGTAGTTTCAAGATTTGCATGTCCAGGCCAATATCGGACGGTATTTACCGG # Questionable array : NO Score: 2.64 # Score Detail : 1:0, 2:0, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAAGCCCCACATGCGCACGGAAGCTAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.30,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //