Array 1 18482-20698 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABWKG010000005.1 Bifidobacterium longum subsp. longum isolate LH_277, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 18482 36 100.0 28 .................................... ACAGCGGCGATATTGCGTTGAATCAGGT 18546 36 100.0 29 .................................... TGTTGTTTCGTCGATGGCGCGGTCGGTGA 18611 36 100.0 28 .................................... CATTCGGAGGAGGTGTCTGTCTGATAAA 18675 36 100.0 28 .................................... ATCCGGAACGGTTCGCCGACGCCGGCCG 18739 36 100.0 28 .................................... GGAGAACAATGATGAACGAGAACGACAA 18803 36 100.0 28 .................................... GCCTTCTCTCGCTTGTGCGGCCAGAAGC 18867 36 100.0 28 .................................... TCTACCGACGTGATGGGCAACTACACGA 18931 36 100.0 28 .................................... GCACTCAGAATTACCACACATCCGATGG 18995 36 100.0 29 .................................... TGCTTACCGCGCCCTTAATACCGTTCCAT 19060 36 100.0 28 .................................... GTATGATTCCTTTGGGTGGGCGTGGATG 19124 36 100.0 28 .................................... ACGACGCAAGTGTGGTGTTGCCCGACAC 19188 36 100.0 28 .................................... GTTCAATCGGCCTTGATAACCCGCCTGA 19252 36 100.0 28 .................................... TGATGTCTCCTGTTGTGATTCGGTTTAT 19316 36 100.0 28 .................................... GAGGCCCGCGACCTGATTTCCAGCGGCG 19380 36 100.0 28 .................................... GCCTCATGATGAAGAGTCGCAAATCATC 19444 36 100.0 28 .................................... TGTTTACGCTCAAAAAGCACATTAGATT 19508 36 100.0 28 .................................... CCGAGGCCGGTAGGGTTGCGTGTCTGGT 19572 36 100.0 28 .................................... GTTGTAATCGGTCATAATAGTTTTCAAT 19636 36 100.0 28 .................................... TCTCCCAGTTGCTGCCCCTTGGCGTCGA 19700 36 100.0 28 .................................... CGTATTCATCGTGGCCTCTTCGCGGTTT 19764 36 100.0 28 .................................... CGTACATGATGGGGTCCTTGACCTTGTA 19828 36 100.0 28 .................................... AGGTCGAGCGCCTCCTGCCATCCGGCCT 19892 36 100.0 28 .................................... ACAGTATTATTGTCCTGATATTCATGTC 19956 36 100.0 28 .................................... TCCTGCAACTCCTCCTTGCGGGCCTTCA 20020 36 100.0 28 .................................... GTTGTTCCGGGAACAACTGGGAACAACT 20084 36 100.0 28 .................................... CTTGCCTCCGTTCTGCATCCAGCTGTCG 20148 36 100.0 29 .................................... ACGCGGCGAAGAATCTTGTTATCGCGGCT 20213 36 100.0 29 .................................... GTCGCACGTGGCATGGCATGTTGGCGAAC 20278 36 100.0 28 .................................... TGGTTTCCGTGCCGCATTGGTCGCAGTA 20342 36 100.0 29 .................................... TCATGGGACTGTGAGCGGCGGCGGCGTGA 20407 36 100.0 28 .................................... TAGAAGTGCAGATTCCGTTCCTGCAAAC 20471 36 100.0 28 .................................... AGGACGTGCAACGCAAGTATTTCAAGAT 20535 36 100.0 28 .................................... TCGTCGATGTGTTCCAAGAGGTTTGGTG 20599 36 100.0 28 .................................... TATTGTTCGGGTGCGATGGTGATGATCA 20663 36 86.1 0 ..............................TTG.AT | ========== ====== ====== ====== ==================================== ============================= ================== 35 36 99.6 28 CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Left flank : ATTCAACGGTTCCGGTTTGACTATACCGAGCTCATTGAATGATTTTGCGCAGCAATTTGGTTTATATTGCGAAGGCAAAATCGACAGGTTGCAGGTTCCCGAATATGTAGGCGAGTCATGAAACGCGATGAGGACAGTGGCGGCATGTGGTGCTTGGTGATGTTTGATTTGCCGGTCAAGACAAAACGGCAACGGCATGCTGCAACTGTCTTTAGAAATATGTTGCTCGACATGGGATATGGAATGGTGCAGTATTCCGTATATGTGCGGTATACGCCTACGCAATCGGGTAGTAGGGCGACGGTCAAAATGATTAAAGACAATCTGCCAGCTAATGGCTTAGTTAGAATTTTGCATATTAGCGATCATCAGTGGTCCACGGCGGCCCGATTTTCTTCTGGAAAACGTGAGATTGAGGAAGAAACGCCTGACTTTCTCACGCTTTTTTGAACGTAGGAGAGTCTGAAAAGATTGAAAAATAGCCCTTCTTGATAGGCTAT # Right flank : TGCTGGAATGCTTGGGTTGATTTGGCTGATTTAGCTGTGATGGCCGCTGCGGGAATGGCCCTTGCGCGGTTGGCGGCAGAGGTTGCGGCGCGGATTGCGGCACTGATTGTTGTGCCAATTGCGTCTGCGGTGAAAAATATGGCGACGGCTGTGTCTGACTGTTTATCGGCGGATGTTCCGGCTCAGGTTGTGGCTGGAATGGAGAATATTGCGGTTGCGCCATTGTATGCCCCTGCCCCTTCATTGCCATTTCATTGGCGCATGGCGAGGGCTGAAAACCAAGATGATGAATCCTGCATGAGTTATCCGTGATTCCTGTGCGTTGGTACAGCGCGGAAGGTTGAGCAGCCGACATATGCAGGCTTGTCGGTTCACGCGAATATCGTGGAACACATGACTTCCAATACCCTTCGTATGTCAACCATGTTCCTGCGCACCCTGCGCGAGGACCCCGCTGATGCCGATGTCGATTCAGCCAAGCTGCTGCAGCGCGCCGGCTA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,-0.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //