Array 1 1621421-1617256 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAATWA010000001.1 Pseudanabaena biceps strain O153 scaffold1_size3970958, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================= ================== 1621420 37 100.0 35 ..................................... TTGCCATGAAGTCACGCTTACCCTCCCATCCAATA 1621348 37 100.0 36 ..................................... GGTTTGCTCATAATTTGCATCCCCTTTACGTTTGTG 1621275 37 100.0 38 ..................................... ATGTGAAATTTTTGGGCTTATTCAACACAGAACTAGGG 1621200 37 100.0 39 ..................................... TTCCGCATTCTGTGCCGCATATAAAGCATTAATATCGAT 1621124 37 100.0 35 ..................................... CTATTTAAGTAATGTCTCCAGAACCTTGACCAGTA 1621052 37 100.0 34 ..................................... TCTGAGAAGACAATGAAATATTAGGGGAAGATAA 1620981 37 100.0 37 ..................................... TGTACTTGCTCTGCTTATTCATATCCTCATTCTGTAG 1620907 37 100.0 37 ..................................... TTAGCATTGTGCTGGCAATGTCCTGCGATCGCTGATT 1620833 37 100.0 36 ..................................... ATCCCAACTGTAAGCCCTGATCAATCTCTATTTGGA 1620760 37 100.0 34 ..................................... ATTTCACCATTGGCGACTTTCCATCTGATTAGCT 1620689 37 100.0 38 ..................................... ATTTCACCATTGGCGACTTTCCATCTGATTAGCTCTAG 1620614 37 100.0 35 ..................................... TCGTTGGGCTGGCGATCGTAGGGTTTAGTTTGTTG 1620542 37 100.0 38 ..................................... AGTATAAAAATGAACTACATCGCCTTTGTCAAAGGCTT 1620467 37 100.0 38 ..................................... ATCGAAAGAGACAGTGCTGTAATCAAATCTGAATTAAG 1620392 37 100.0 37 ..................................... AGCATTAAATCAATCATTGCTTGAGGTATAGAAGTGT 1620318 37 100.0 35 ..................................... ATGATCCAGTAGCTCATACAGCTATGCTCACTAGC 1620246 37 100.0 35 ..................................... TAAACCTCTTTTTAGGGATACGGGCATACTCTTTT 1620174 37 100.0 38 ..................................... ATGCCTTAAATTTGCTTAAAAACTGTATCTTATTGTGA 1620099 37 100.0 38 ..................................... TTATCAGGTTTCTAGCTTGGGTCGGGTGCGATCGTTGG 1620024 37 100.0 34 ..................................... AACAAAGAAGCGCCGAAAGCTGTAGATGGTTTTA 1619953 37 100.0 35 ..................................... TTTTTGATTCGCCAAATCAAAATCAGGCAATGGAG 1619881 37 100.0 35 ..................................... TTTACAAAGCGACTCAATTGGTTGAGGTTTAATAT 1619809 37 100.0 36 ..................................... TTGTTTCTTCAATCGACTTTCTGCCACGCTGTCTAG 1619736 37 100.0 36 ..................................... CCTATAGCTGCATTTCCTTGTTTGATACTGAAAGCG 1619663 37 100.0 38 ..................................... AGGGTTCGCAGCTTTATATAACCTAATCCTTTGCCTTT 1619588 37 100.0 38 ..................................... GCAGAAAATCTAAGCCAGCTTGATAATTAGAGCCGGCT 1619513 37 100.0 36 ..................................... TTAAGCTGCTTGAAAAGGTTGAAATCTTCTTTCTCA 1619440 37 100.0 37 ..................................... TCATCAGGCATATGCAGTGCGATCGAAATAGCCAACG 1619366 37 100.0 32 ..................................... TAATCCGATTTTCTGGAAGATACTTGGTAATT 1619297 37 100.0 40 ..................................... TTGTGTTGTTTAATTGCTCAAATTTTGCTGATGTTTCAAA 1619220 37 100.0 33 ..................................... CAGAAGTCGCAGACAAGCACGATCGCGTATTGA 1619150 37 100.0 33 ..................................... GAGAAAGCTTTGGCAATCGAGCTAAATCAAGAC 1619080 37 100.0 35 ..................................... GTGGATTCAGCCTGTCTGAAAGCGGTTTAAAAGGT 1619008 37 100.0 34 ..................................... ATCTAAAATTGTTGCAATGAAAAGGGCTTAGATA 1618937 37 100.0 33 ..................................... AGCTTGTATGTAAGCATCAAGCGCTGTCTGTAA 1618867 37 100.0 36 ..................................... GAACCATTTTTCGCCTTAGCTCTAACAGGTTTGTCG 1618794 37 100.0 40 ..................................... ATTGGGTTAAACACAAAACCATTGACAGCGAAACAACAAA 1618717 37 100.0 40 ..................................... GGAACTCGTTCTTAAATATAAACACTTATATAAATAGGCG 1618640 37 100.0 34 ..................................... CATACAAGTATGGACGGCGATCTCATTTGTCCAG 1618569 37 100.0 35 ..................................... ATGCGATCGTCCATTGCCATTACTACTCGTTTCAG 1618497 37 100.0 36 ..................................... TTCTTTCACTAAACATAGAAACAACGGACGCTGAAG 1618424 37 100.0 34 ..................................... CTAGGGGGAAACTGAAAGGGGGCGCTACTCCCCA 1618353 37 100.0 38 ..................................... GTAAAAAGCTCATCGGATGACCCGATCGCCACACCGTA 1618278 37 100.0 35 ..................................... AGAAGTTACAGCCTGCAAGCAAGCATTATTTCTAG 1618206 37 100.0 37 ..................................... GAGGTAAATCCTGCACTTCCCATGATTGGATCGGGTG 1618132 37 100.0 37 ..................................... TCGGTGTAGCTGCTAATGGCTTTGGGTGCTGTGGAAG 1618058 37 100.0 40 ..................................... TAGCCAATGGCGCATACTGCCACGTTGGAAAATATCTATC 1617981 37 100.0 37 ..................................... GATATTGACCGCGACTAATTCAGGTGTGGATTATGAA 1617907 37 100.0 44 ..................................... ATTTTCTTACCAAATACATATCGACAGGTGCTTGCGGCTTCAAA 1617826 37 100.0 37 ..................................... CATGCTTTTTTATTTCTGGAGCAGATAAATCTATCAA 1617752 37 100.0 36 ..................................... AGATTAAAAAGCCTTGTTCTGATTCATTAGTCTTGC 1617679 37 97.3 40 .....C............................... TTTGGTTGTGACCTTATACCAGCCCTTGGGCAAACTAGCG 1617602 37 100.0 42 ..................................... ACATCTAATCAAATACTATGAATAAGCATCCTTTTAAGAGAA 1617523 37 100.0 36 ..................................... GAATGTGCGATCAAATGGATATACAAAAATCTATAA 1617450 37 97.3 45 .T................................... AAACCTTGGGCTAAGCCTTGGCACTCTCAAAGTCAGAGGCTTCAA 1617368 37 100.0 39 ..................................... CATTCTGGTTCCTTTGGTGGTAAAGATCGTCCCCAGATT 1617292 37 94.6 0 ......................C.............A | ========== ====== ====== ====== ===================================== ============================================= ================== 57 37 99.8 37 GCTTCAAAACCTCTGAAACCCTTTTAGGGATTGAAAC # Left flank : CGTAATAAGATCCATAAGATTCTCAAGTCCTATGGGCAGTGGATGCAGTTTAGTGTGTTTGAGTGTGAGCTTACTGATGCTCAATATGCGAAGTTGCGATCGCGTTTGAGTAAGTTGATTAAGCCTAGTGAGGATAGTATTCGCTTTTACTTTCTTTGTGGGTGCTGTCAGCCTAAAATAGAACGTATTGGCAGCGAGCAGGTACGAGACGATACAGTATTTTTTGCTTAATTTTTAGTTCATGGTTTGCGCGAGTTGGCGGGTGTTTTTGGAAATAGTATGCAATTTTCGGGTTTACAAGTCCTGGCTGGTATGTTTTTGAATGCGATCGGGCGATTGAATCGGTTCGCGGAATCTTGCAATGTATTGATATATCTAGGTTTTCAATGGTTGCTATCAGTTCTAAAGTCGATGCAGTTAGCCAATTTTTGCTACAATTCTCATGGTTCGCGCAAATGCACCTTGAAAATCAAATATGATATGCTTTCTGAGCGCGGACG # Right flank : CTTTTAACAAACCTAGTAAGAGTTTTCAAAACTAGAAATGACGTAGCCATTTTTAGTTTTGGTATTAATTGTGATTCTTTATATGAGAGATCAATATTGCTATGGCAAATAAATTCTGAGATTTGCTTATCCCATATTTAACTGTATAAATACTAAAATTTGCCTCTATTTGGGTTTGATCGCCTAGCACTCTAGGTTTATTGACAATGTGACGTGATCACTAATAATGAGTAAATACACTTAGCGTACAAAAGTTAACAGTTTTTCGGATATACTCCGCTAAACTTTTGGCTACATTAATTCTGATTTTTAGTGTGAGGAGGACAAGGCGATCATTTCTACAAACAGTTCTAGCCATAAAAACACGACCAGCAATTTACAAAACAATCTACAGCCTATGCAATCGACGATGGATCTCGGCACAGTTTCACCTACTATTGAGCCAATGTCACCAGAGACTAATGCCCCAATCCTCCGCATTATTGGTAAAGCACCCCTCT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAAAACCTCTGAAACCCTTTTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.50,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : NA //