Array 1 413862-412694 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NRFD01000003.1 Pseudomonas aeruginosa strain SJU-S72_1 NODE_3_length_413993_cov_53.3054, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	============================	================================	==================
    413861	    28	 100.0	    32	............................	AGGAAAAGCTCGCACGCTGCGCGGATGAAGAG	
    413801	    28	 100.0	    32	............................	CGGTAGAGACGTCGGTGAGCGCTGCGATCTGC	
    413741	    28	 100.0	    32	............................	GCAATCGATCAGGCTATGACCGCCGAAGCCTA	
    413681	    28	 100.0	    32	............................	TCGACGTTGCCGACCCGCGGCCGCGCCCGGTT	
    413621	    28	 100.0	    32	............................	TCGGCCAAGGCTCCGGCATCGAGCACGATGCC	
    413561	    28	 100.0	    32	............................	TTGAGGAACAGGCGCGCTACGTCCGCCGCGAA	
    413501	    28	 100.0	    32	............................	TTGATGATGCCGTCCTGCTGTTTGCCGGCGAT	
    413441	    28	 100.0	    32	............................	ATTCCGGCAGAGGTTCGCGAAGCGGACATTGA	
    413381	    28	 100.0	    32	............................	TGTACCAACTGAGGTGCTACCTCAACCATGGC	
    413321	    28	 100.0	    32	............................	AGGCCGATGGAGTAGCCGGACAGCACTGAGCC	
    413261	    28	 100.0	    32	............................	TAGTGTGGAATTGATGTGCGCATCTTCTTAAA	
    413201	    28	 100.0	    32	............................	TGTGCCGGGCAGGCTGGCCAGCGCCTCATTGA	
    413141	    28	 100.0	    32	............................	GTCGGCCTGGAGTTTCGTCGGGCGTACATCAG	
    413081	    28	  96.4	    32	.................T..........	CAAGCGGACGGTGACACGGACTATCAGACCGG	
    413021	    28	 100.0	    32	............................	TCCGGCACGCTGTGCTGAGCCTGAGCTACAGG	
    412961	    28	 100.0	    32	............................	ATCTCAGCGCCGCCTGTTCTGCCGGCCGCATC	
    412901	    28	 100.0	    32	............................	TACGGGCAGTCACGGCGAAAGGCACTCAGCGA	
    412841	    28	 100.0	    32	............................	TCGCGCAATGATTTCAGCCGCGGAGCGCATAG	
    412781	    28	 100.0	    32	............................	ATAGATAACACGTGTGACCGCGACCACTACCG	
    412721	    28	 100.0	     0	............................	|                               	
==========	======	======	======	============================	================================	==================
        20	    28	  99.8	    32	GTTCACTGCCGTATAGGCAGCTAAGAAA	                                	       

# Left flank :   CGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCGGGAAAAACTCGGTATTTCCTTTTCCTTCAAATGGTTATAGGTTTTCGGGGCT
# Right flank :  CTCAAGAAAGAGCAGAACGGCCAGCTTGCGCCGTTCATTGCCGTGTAGTCCCGTAGGGCGAATGCCGCCATAGGCGGTATCCGCCCTACGGATCGGGTTCCTGGCATCCACGAAGTGAGGCTTGCCCTCCAAGTGGTGGGGCGGCAAACCCGCCCCGTCAGGAGGCCGAGCGGAATCGTTGCGGAGGGGGACGAGTGGCAGGATGCCGCGAGAGCCGCCTCGGTCCACGAAGGACCGTGGCGGCGTGCCGCCGGGAGCAACGATGCAGCGAGGGCACCCCAGCCGAGAAGCGGCTGGGGCCGGATGCCGGGGCGAGTCTTTTGGTTCCTTTTGGACGCTTGCAAAAGGAACTCGCCTGGGAAGGCGAAACAAGAGGCCAAGGCAGGCACAGAAAATAGCTTGACCACCAAACATGACGCCCGCTCAAGCGCTAAGCAACAGCGCCCCCCTCACTGCCGTGTAGCTAAGAAATCGCGAGCGATATAGTCCCGTAGGGCGAA

# Questionable array : NO	 Score: 6.25
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCACTGCCGTATAGGCAGCTAAGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:53.57%AT]
# 	Reference repeat match prediction:         R [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-7.70,-8.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [40.0-56.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.55   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
//