Array 1 72969-74757 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRLC01000002.1 Bifidobacterium pseudocatenulatum strain AM13-8 AM13-8.Scaf2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ===================================================== ================== 72969 35 100.0 40 ................................... ATCACGCAAAATAGTGAGCAGTTGAGCATCGGCCATGGTG 73044 35 100.0 37 ................................... AACGCTGCGTTTCGGCATGGCCTGTTCTTTGTTCCAT 73116 35 100.0 38 ................................... ATGACGATTTTCGCAAATACGCTACCACCGCGTCGCAG 73189 35 100.0 37 ................................... ATTGGCACCGGCCTTCCCTTCCGCTGTCGCAGCTTGC 73261 35 100.0 38 ................................... ATTTAAATCACTTCGCTCCGTCGGTACGCCAGGTCTTG 73334 35 100.0 35 ................................... ACTAAAAGTGGCGTGCGTGCAATGTCGATAGCGTC 73404 35 97.1 38 .G................................. ATCGTCCTCATGCGGATCCATGAGCTGGTGGACGTGTT 73477 35 100.0 39 ................................... AGATAGGCAATGTTTCCATCAAAATTATATCATGCGGCG 73551 35 100.0 38 ................................... ACGCAACTGATTACGATGTTGCCGACGATTGTTCGGCA 73624 35 97.1 36 .G................................. ATTTTACCGGCGAGATCGTTGGAGCGTCATTCTACG 73695 35 100.0 38 ................................... ATCCATGCTCATACCGGTGGCCGGCAGCGTGTCGCGGG 73768 35 100.0 37 ................................... AGCTAAGACTGGCGAGGAAGTCGTGGAAGACTGCAAG 73840 35 100.0 38 ................................... ACCGACCAGCCGGGAAGCCGTCCAGCAGACGAATACTG 73913 35 100.0 37 ................................... AGGTTTGAGCGCCGAACTCCTGCCGGAAGACGAAACA 73985 35 100.0 38 ................................... GCTTGGAGACGATGTCTACGGACGTTACTCGCTGCCAA 74058 35 97.1 37 .G................................. GCTGGTCTGCACGAAGGAACTGTGCGACGAGATCGTA 74130 35 100.0 37 ................................... GAGGTGGCCTGAGCGGTAACCTTCAACACTTCGGCGG 74202 35 100.0 37 ................................... GCGCAAACACCGCGCGCGTCTATAACAAGCAGACCGG 74274 35 100.0 36 ................................... GGGAAAGCTATCCGGTCGTTTAATCGCCGATCAGAG 74345 35 100.0 53 ................................... AGTGTTGGGCGTGTGCCTGGGACATCAGATCATCGCCACCGCGCTGGGGGCGA 74433 35 100.0 38 ................................... ACTCGACGGTGACAAGGTCGGCAGCGTCGTCAACGGAT 74506 35 100.0 37 ................................... AGCGCGCGGCGGCAATCCGGAGACTGAAGCCAGGTTC 74578 35 100.0 38 ................................... AGGGGACAATGACCCCGCTGATTTGAGGGACGGGTATA 74651 35 100.0 37 ................................... AGAGAGATAATAGTTGGCGAGCCACTGGCTCAGATAG 74723 35 97.1 0 ..................................A | ========== ====== ====== ====== =================================== ===================================================== ================== 25 35 99.5 38 ATTCCTGAGCTAATCAGCTCAGGACTTCATTGAGG # Left flank : GATGATAGACGTCGTGATCACGTGGCAAAAATATTACGGTGCTATGGCGAGAGGTTGCAGTATAGCGTGTTCTTTCTGCGGATTCGGCCTGCAAAAATGCTGGTTGTCCAGAATCTAATAGAAGTTGAAATCGATGGTTCAACGGATTCAGTTGTTGTCTGTTTTCTCGGAAAAGAAGAGCAGGCAAGAGAGGGAATGTCATTCTTGGGACGACGGGAATACAGTGATTTAACCATTCCGACGGTTATCTGATTTCACTTTAACCTCTCTGATTGTCTTTCACCTATGTGATTGTGGCTTGATAATTCAAAAGGTTTTTTATGAATTTTGGAATACGAGAGGTGAATCATTGCTGCGACACGCGATGACCTCTCGCATGAGGAAATATAAGGGTTTATGTCTCTTTTTCTGGTGATAAACTGACTGGAGGGAGAGGTATCTGTTCCGCTCTCGCAAAGTTTTTAATTCGCTTAGTCATTAGAGCGGATTAGAATGAGACC # Right flank : AGTCTATTGGCTCTGATTGTCGTTGTGCGCCCTGGCTTGTGAAGCCGCTTTCTGAATTAGGAATAGCTGCTATCAGGGAGGGCAAGAGAACTATGTCAAATTTGACGTAGATTGTGGCATTTTCTGTGGCCAAGTTCATCCTTGATGAAAGGATTTCTACTTGTAATGTAGTATTGGTGCGTATGATGCTGAGAATTGACGAGCGCGATTTGAGGTCGAAGCTCAATGAGCACAGGAGCCTTATTGGATATGGTTCCAAGGGCGACGGCATCGCCAACATTGTTGCGGGCCTATTCTATATTCCAACAGCATGGACGTTTGCGGAATTGCCGATGCGGGCACGATGCTTATTTGCTGTGCTGGGTGTTGTGATAATCGCGTTGGGTGTCGCGAGTATCGTATGCAAGGGACTCACTTCCGAAAAACTATATAAGGAAATCGAATCGATGAACAGAAGAGCTAGCTCTCTCATTGCGGTCAAGGATGGCATGGACGCGCTG # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCCTGAGCTAATCAGCTCAGGACTTCATTGAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.10,-7.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA //