Array 1 66709-68197 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNNP010000014.1 Parabacteroides goldsteinii strain 1001713B170207_170306_B11 NODE_14_length_186241_cov_14.8404, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 66709 32 100.0 35 ................................ CGATCTGTTGCTGAAGAAGTCGAAAGACTGACGGA 66776 32 100.0 35 ................................ CATCCGGAGTCAAAGTAGCCGATGGCGTATCGCCT 66843 32 100.0 34 ................................ ACAGCATTTGAAATATCAATCATACCCTCATTGA 66909 32 100.0 33 ................................ CGATCCGGATCAAGCTATTGGTACTGGACGTGC 66974 32 100.0 36 ................................ TCTACGTGATATTTTAATAAAGAACCATATTGCAAT 67042 32 100.0 33 ................................ CCACAGACAACCAGACGACTGGCTTTAGTCGGC 67107 32 100.0 36 ................................ TGTTGATGATTGTCAACAAGCGGTCATAAACATCTG 67175 32 100.0 35 ................................ ATAATTAGAAAGTTATGAACAGCAACGCACATGAA 67242 32 100.0 34 ................................ CCTTATCACCTTTCGGCAAAACAAGGTCTAATTT 67308 32 100.0 33 ................................ TTTACCTTTGTCGGTCGAAACATCTACGGACAG 67373 32 100.0 35 ................................ CCTGAATATGTCGGTGCAACAGGTGGCAAGAGAAT 67440 32 100.0 34 ................................ CACGAGGCTCAGACGGAAACCCTGGCGAAGACGG 67506 32 100.0 36 ................................ ATGACATTCAGGCGCAAATATGATCCGACAAAACAA 67574 32 100.0 36 ................................ CGATTAAACTTATGAATCAAGTACAGGCTAAGTATA 67642 32 100.0 33 ................................ TTCCCCTTGACCAAAGGCACCACGCTCTAACGG 67707 32 100.0 34 ................................ TTATAGCATCCTCTGAAACCCCATATCCCTTAGC 67773 32 100.0 33 ................................ ATTGTTATTTTCATTTTGTTGTTTCTCTCTCAA 67838 32 100.0 33 ................................ CCGGATCTGGGGGATTAGCTCAGTGGTAGAGCG 67903 32 100.0 34 ................................ GTTTTTGGGCCGGTGGCGCAACTCCAACGAATGG 67969 32 100.0 33 ................................ TCTAATGTCTATCATAAGTTTAGTTTTGTTTAC 68034 32 100.0 34 ................................ CATATAAATTTGCCATAATTGATTATTTTGAAAA 68100 32 100.0 34 ................................ TTACATTGGACAAATCAGTGAAAAATACATTTTA 68166 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 23 32 100.0 34 GTCGCATCCTTTACGGGTGCGTGGATTGAAAC # Left flank : CTTTCAAGTCACGCTGTCCAAAAGCCTGCGAAGTCATACCACTCGTCCCCATCCGCAAAAAACCAAACAGCCAGTAAATAATATTGAATAGCATCCCTCCTACGGCAATCGCCCCTATATAAGCCGCCGATCCTAAATGACCGACAATAGCGACATCAATCAGTCCCAATAACGGAACGGTTATATTTGAAACAATAGAAGGAATTGCTAATTGAAGAATTTTTTTGTTCATGTTATTGTATATACCAAAAGCTTATTCTTAAATTTGTAAGCAAAGTTACGGATTACTTTATATATAACATTATAACGCAACAATGTTTCAATAACAGATAAAACGCGAACCCAAAGTGGTTGTAAAAACACAGGATGTTCGCACTCCCTGTTATTCTGATATTTACAATATTATTAATAACTATACAAATACCTATTATTTGTACACTTTATTATTCGCAAAATTATATGCTGAAAATGTTATCAATAAAGCTTTCCATAAACATGTA # Right flank : CTTTTAACCCATGCCTGACCATGTGTAAACTTGGTCGCATCCTTTACGGATGCGACACGTTCCTTTTTCAGAGCGTTCAAATCATCATCGTTTCAATCTACTTAGTGAGTTCGTTTCATTACTAAGAATTACTATACTAAGTATAATTATAAACAAAATACAAACGACCACAAAAAGAAAATGTCATTATTCATCAATAGACTGTTCTTATGTCATTTACCTCTACTAAATCAAATTAATTTGCCTTCCATTGTAAATTAAAGCATGAAAGCTTAGTTCATTAAAAAATAAAACATAACTTTGTGAAATAGGAATAACAGAGAAAGTATATTTCTCAAAATGTGGACACCTATATTATTATTCACAATTTGTTAACCTAAACTTATGGTATACACGAATAAAGAATACTGTCTTGAGGTTAAAGGAAGCATGGCCTGTTTTACCAGACCTGAAATGAAAGTCGAAAGAGTCAGCTATGATGTGATAACTCCCTCTGCTGC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCTTTACGGGTGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.30,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [76.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 74062-74488 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNNP010000014.1 Parabacteroides goldsteinii strain 1001713B170207_170306_B11 NODE_14_length_186241_cov_14.8404, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 74062 32 100.0 34 ................................ CGGACGAAACGGCAAATAAGTTGATAGAAGAAGG 74128 32 100.0 34 ................................ ATCATATTGCGCCAGAGAACCAGCCGGAATAATC 74194 32 100.0 35 ................................ TTGTCTGCGGGGAACTGAACAATTGGGGATATAAA 74261 32 100.0 33 ................................ CCCTTGCACGATCAGGATATTACCTGTCGGCAC 74326 32 100.0 33 ................................ CGAAAAACCGGAGCCGTAACCTCAATCACTATT 74391 32 100.0 34 ................................ CAGGAACCGACAGCCAGTCCATTTTGGTAAGCTG 74457 32 84.4 0 ......C....C........A..AA....... | ========== ====== ====== ====== ================================ =================================== ================== 7 32 97.8 34 GTCGTATCTTATAGAGGTACGTGGGTTGAAAC # Left flank : TTAGATAATTATCCGGTCTTTTTAATGAAGTAATTTTATGTATGTTCTAGTTACATATGACGTTGAAACGATGACTTCCGACGGACAACGCAGGTTACGTCAGGTAGCACGTCAATGCCTGAATTATGGCCAACGCGTCCAGAATTCCGTTTTTGAATGCTCTGTCTCGCCTGCTCAATTTACCGAGTTAAGATTAAAGCTATCGGATATCATAGATCATAAAAAAGATAGTATCCGTTTCTATTTCCTGGGAAATAATTATTCTAAAAGGGTTGAATACATAGGTGTCATCACATCTTATAATGTAGAAGACGAACTTATAATATAACTGTTCGCGAACATTAAGCATTACCCCAAAAGCCGGGGTTTTCGCATTTATTGATTATTAGTCTATTGCACATATCTATTGGCTCTATTTCATCAATAAAGAATCCAAAAAGTTTATTATCGCATAAAGATATTGGTAACAAACTGTAAATGTTTGTGTTATTTGTAATGCG # Right flank : CGAGTAAAACGCACCAGCGTTCGTTCCATTATCCGGTCGCATCCTTTAGGGGTGCGACACGGCAATATTTGGGACTAGCAACAGTTCTAATGTTTTACAGGGATGATTGCATCATAATCATTATTCTTCATTTTATTATTTCAAGCCATGTATATTCACCTCTTAACTCACAACTTATTAAATTATCAATTTCTTTATTTTACCATGCAAAACAGAACTACTCCACCCTTCTTCTTTACACGCTTTTGCATAATCGTCACGATGTAACTTATTATCTATCAGAAACAATTTCAAAAAATGAGTCCAAGTAAGCTTTTTCGATAAATCAGACACTACTTCAACTTCTGGAAAATATACAAAGAATAACTCCATTTGAAGCAAGTGTCTAATTTCAAATTCCTTACCATAGCGTTTCACTAATTCACGAGAAAGATCTTTAAAAGTATCTATCCGATGAAGTGTTGCCTCTTTACTATAAACATCTTGTTTAATTAGTCTAC # Questionable array : NO Score: 3.15 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTATCTTATAGAGGTACGTGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.70,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA //