Array 1 83566-83365 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV819989.1 Bacteroides sp. HMSC073E02 Scaffold88, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 83565 47 100.0 30 ............................................... TTTTTTATCACGGCAAAGAATACACTTGCC 83488 47 100.0 30 ............................................... TTGGGAGTTTAGTCCCCACACTTTGGGAGT 83411 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 3 47 100.0 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAAT # Left flank : AGACTAAGTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAATAGGACGTAATAAACAGATACGAACTAGGCAGTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAATCATACGTTTTGGACTGCATTTATAATAATGGTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAATCATAAGATCAGTCTTGGAAGTAGCAGATAGTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAATTACGGGAATTTGTACCACAGGGTTTGTCAAGTTGTGATTTGCTTTCAAATTAGTATCTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTATCTTTGAACCATTGGGAACAATTGGTATTATGTCTTATGTTGGTTGCGTTC # Right flank : ACATTTCATATAATAAGATGTAATTCAATTAGTTACAAAGAAGATTAGAAAAGAAAAAAGAAGACTGTTCCCAACACAAAATCTCGCATTAATGCGAGATTTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAAATCTCGCATTAATGCGAGATTTTGTGTTCTAAAACAATTCCAATTGCTGCCCTGGTGTATTGACACTCTGCGCCTTCTTTCCATAGAAAAGTTCTATGTCCCCAAATTGTTTATCCGTAATACACATGACTCCGACATGCCCTAGTTCCGGAAGAAAAGATTTAACTCTTTTTATATGTACTGCTGCATTCTCGCTACTAGCACAGTGACGTACATAAATGGAAAACTGAAACATCGTAAAACCATCTTTTTGCAGATTCTTTCTGAAATCCGCATAAGCCTTCTTTTCCTT # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.75%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.91 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 2 84213-83782 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV819989.1 Bacteroides sp. HMSC073E02 Scaffold88, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 84212 47 100.0 30 ............................................... TCTTTTCCAGCGTTCAACGATACCAAGCGT 84135 47 100.0 30 ............................................... AAATCACAAATACAAAAAAGGTGAGACTAA 84058 47 100.0 30 ............................................... AGGACGTAATAAACAGATACGAACTAGGCA 83981 47 100.0 30 ............................................... CATACGTTTTGGACTGCATTTATAATAATG 83904 47 100.0 29 ............................................... CATAAGATCAGTCTTGGAAGTAGCAGATA 83828 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 6 47 100.0 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAAT # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTATCTTTGAACCATTGGGAACAATTGGTAGGCGTAAATGACGCGATTTGGGCGGGTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAATCTTAGCCGGCATGGAAGTAAAACGCACTGGTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAATCTTACCTAGAGCCTTATCACCATTGGCATAGTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAATATACTTAAAATGAGATGACATATTAGATAGTTGTGATTTGCTTTCAAATTAGTATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTAGTATCTTTGAACCATTGGGAACAATTTTCTTTTCCGGGGGCTGTACTGTCCCTGC # Right flank : TACGGGAATTTGTACCACAGGGTTTGTCAAGTTGTGATTTGCTTTCAAATTAGTATCTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTATCTTTGAACCATTGGGAACAATTGGTATTATGTCTTATGTTGGTTGCGTTCGTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAATTTTTTTATCACGGCAAAGAATACACTTGCCGTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAATTTGGGAGTTTAGTCCCCACACTTTGGGAGTGTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAATACATTTCATATAATAAGATGTAATTCAATTAGTTACAAAGAAGATTAGAAAAGAAAAAAGAAGACTGTTCCCAACACAAAATC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 3 84628-84428 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV819989.1 Bacteroides sp. HMSC073E02 Scaffold88, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 84627 47 100.0 29 ............................................... CTTAGCCGGCATGGAAGTAAAACGCACTG 84551 47 100.0 30 ............................................... CTTACCTAGAGCCTTATCACCATTGGCATA 84474 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 3 47 100.0 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAAT # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNAATTAGTATCTTTGAACCATTGGGAACAATACCAGCATGTGTAAATTACTCCGTCTTTCTGTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAATGTGTCAAAAGGAAATAACCACTTAAAAATGTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAATATTATATCCTAAAAAAGATGAAAAAACCGGTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAATAAATAAGTCAGCACAGCCGTATGGATTCGGTTGTGATTTGCTTTCAAATTAGTATCTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTATCTTTGAACCATTGGGAACAATTGGTAGGCGTAAATGACGCGATTTGGGCGG # Right flank : ATACTTAAAATGAGATGACATATTAGATAGTTGTGATTTGCTTTCAAATTAGTATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTAGTATCTTTGAACCATTGGGAACAATTTTCTTTTCCGGGGGCTGTACTGTCCCTGCGTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAATTCTTTTCCAGCGTTCAACGATACCAAGCGTGTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAATAAATCACAAATACAAAAAAGGTGAGACTAAGTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAATAGGACGTAATAAACAGATACGAACTAGGCAGTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAATCATACGT # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [70.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 4 85043-84844 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV819989.1 Bacteroides sp. HMSC073E02 Scaffold88, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================= ================== 85042 47 100.0 29 ............................................... GTGTCAAAAGGAAATAACCACTTAAAAAT 84966 47 100.0 29 ............................................... ATTATATCCTAAAAAAGATGAAAAAACCG 84890 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================= ================== 3 47 100.0 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAAT # Left flank : NNNNNNNNNNNNNNNNNNNAATTAGTATCTTTGAACCATTGGGAACAATTGCCGGAAAGATTTCCAACGTTAAAGAAGTGTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAATATACCTAAAGCTTAAAACAATTTAATTTATGTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAATTAATCAGGGCGTTTAAAACCGCCGGACTGAGTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAATCTGATACGCAAAACGGGCTTATGAATATGGGTTGTGATTTGCTTTCAAATTAGTATCTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTAGTATCTTTGAACCATTGGGAACAATACCAGCATGTGTAAATTACTCCGTCTTTCT # Right flank : AAATAAGTCAGCACAGCCGTATGGATTCGGTTGTGATTTGCTTTCAAATTAGTATCTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTATCTTTGAACCATTGGGAACAATTGGTAGGCGTAAATGACGCGATTTGGGCGGGTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAATCTTAGCCGGCATGGAAGTAAAACGCACTGGTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAATCTTACCTAGAGCCTTATCACCATTGGCATAGTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAATATACTTAAAATGAGATGACATATTAGATAGTTGTGATTTGCTTTCAAATTAGTATCNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 5 85464-85263 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV819989.1 Bacteroides sp. HMSC073E02 Scaffold88, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 85463 47 100.0 30 ............................................... ATACCTAAAGCTTAAAACAATTTAATTTAT 85386 47 100.0 30 ............................................... TAATCAGGGCGTTTAAAACCGCCGGACTGA 85309 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 3 47 100.0 30 GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAAT # Left flank : CAACATCAAAAAGCGTTTGTCAAGTCATTTGGGATTTTATCGTTAATATAAAGGAATACCCACCTTTATTAACCCAATTACTAAGCAATTGAAACAAATTGAGCATTCTCAATATTTAACGCTAGAATTAAGTCTAATGCTCACAAAAAGAAACTTAAAAATACTTATACGAAAATGACAATCTTTAAATCACAAGAAATAACATGTTTATATTAAAAAGAGATACATGAATGGATTGTGATTTACTTTTAAATTAGTAACTTTGAACCATTGGAAACAATAGAAATTAAAAAAAAAGTCAGCCAGCAGAGTTGTGATTTGCTTTCAAATTAGTATCTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTAGTATCTTTGAACCATTGGGAACAATTGCCGGAAAGATTTCCAACGTTAAAGAAGT # Right flank : CTGATACGCAAAACGGGCTTATGAATATGGGTTGTGATTTGCTTTCAAATTAGTATCTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTAGTATCTTTGAACCATTGGGAACAATACCAGCATGTGTAAATTACTCCGTCTTTCTGTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAATGTGTCAAAAGGAAATAACCACTTAAAAATGTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAATATTATATCCTAAAAAAGATGAAAAAACCGGTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAATAAATAAGTCAGCACAGCCGTATGGATTCGGTTGTGATTTGCTTTCAAATTAGTATCTTTNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGGAACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.75%AT] # Reference repeat match prediction: R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //