Array 1 37809-39094 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_WOGA01000004.1 Streptococcus equi subsp. zooepidemicus strain NVSLTN-LUNG1 contig004, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	================================	====================================	==================
     37809	    32	 100.0	    33	................................	GTACAAAATAGTGTGTTAATATAGTATCATAGC   	
     37874	    32	 100.0	    33	................................	CAGAGATTGATATCCAAAAAACAAAATCCAATG   	
     37939	    32	 100.0	    35	................................	CTACCAAGATATTTGTAACAATCTTGGAATGGATT 	
     38006	    32	 100.0	    34	................................	CTGAAGCAATAGCTAACAATCCCGCTTTACAATT  	
     38072	    32	 100.0	    33	................................	AAGCTTTTATATGGCTGATAAACTGCTTGGAAA   	
     38137	    32	 100.0	    35	................................	AAGGTATTGAGGAAAAAATTGCCACTGGCAAAAAA 	
     38204	    32	 100.0	    34	................................	ATTGCTAACACTAGTAAAATTACCTCGTAGTGTC  	
     38270	    32	 100.0	    34	................................	ATGGTTAATGTCCAAAAATTAAAAGGTGTGATTG  	
     38336	    32	 100.0	    35	................................	AAATCAAGGGTTGAAAACTTTGTAATTTTTGGCAT 	
     38403	    32	 100.0	    34	................................	CATTGAATCGCCAGCTACTTTTGCAATAGTATCA  	
     38469	    32	 100.0	    34	................................	CATTGAATCGCCAGCTACTTTTGCAATAGTATCA  	
     38535	    32	 100.0	    35	................................	AGCTTTTAATAAGTTGTCAAGACTAACAGTACCAT 	
     38602	    32	 100.0	    35	................................	ACTAAAATATGCAAAATAATGAATAAAAAGGAGAG 	
     38669	    32	 100.0	    33	................................	AAAGGAAGATGAGTACTTGGCTAGACGACTTAA   	
     38734	    32	 100.0	    33	................................	CTAAAGAGGTGACGGAATGAATAAAAGCGAAAT   	
     38799	    32	 100.0	    34	................................	TCAGAAACAAATAGCTGAACAAATGAAGATTTCC  	
     38865	    32	 100.0	    33	................................	GTGTATCGCAGACATGCATTGCCTTGCGTTTCG   	
     38930	    32	 100.0	    33	................................	TGCGAGATTAACTTACTGCACATGGATTTTATC   	
     38995	    32	  87.5	    36	........C..TGC..................	CTAAAAGACTTTCTGATTTTAACCAACCCTGACAAC	
     39063	    32	  84.4	     0	........CCAT.C..................	|                                   	
==========	======	======	======	================================	====================================	==================
        20	    32	  98.6	    34	GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT	                                    	       

# Left flank :   TAAGGCTATTCGAGGGGATATTGATAGCTACCCACCTTTTATGATTTAGGAGATTACTGATGATGGTATTGGTTACCTATGATGTGAATACAGAAACAGCATCAGGGCGAAAACGGCTACGTCAGGTAGCAAAATTATGTGTTGATTATGGCCAGCGTGTGCAGCATTCAGTATTTGAGTGCTCGGTAACACCTGCTGAATTTGTTGAGATCAAGCATAAGCTGACGACGATTATTGATATGGAAATGGATAGTATTCGTTTTTACTTGTTAGGAAAGCACTGGCAAAATCGTGTCGAGACGCTAGGGCGTTCTGATAGCTATGATCCTGATATAGGTGTCTTACTTCTGTAAAAGGAGCGAGTGCGAGCCTGGATTACTCATAAAATGCTGGGAGGCTCGCGCTAAAATAAGCTAAAAAATGGAGAAATGAGGGGTTATAGCTGAATATGTTAGTAGCTAGCCTATATCATTTCTCTATAAACTGTGCTATATTGCGCA
# Right flank :  TTTTGCTGCTATGCAAGGAGTGACACTGATTGAAGTCGCTCTCTTCTCGAGGGCGTGGTCCGTATCCCTGGTACTTTTCATGAAGGGATAAATCATATCACATTAATCAAGTTGATTTAAGCTTTTTATGGTACTATGTCAAATAGATAAAAATCTCTGTGTCAAGTGTAGTGGGTGACTGATAACTAAGCACGAGAGGAGACGAAGGTCGTCTTCTCTTTTGTCATGTTCAAAGCAAGCATAGATAAGTTTCTTGAAATTGTCAAAATTTATGTACCTAAAAGCATTGCATTTGATGCCTTTGATAAATTTGTTAGTCGCTTCAAGCTTGGCGTTAGAATAAGGCAGTTCAATGGCATTGATGATATAGTCGTTATAGCGTATTAAGGTGTTCAAAGCTGTTTTGAAGGGGTGATTGAGATGAGGCATAACTCAAAGAAGAGCTCTGTATTCTTTTCTTGCAAATGAAAAAGAGGCAGCTGATAAAGGTCATAATAGTC

# Questionable array : NO	 Score: 9.19
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTCGCCTTTCATGGGCGAGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     R [6,10] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-5.40,-2.80] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-9] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [65.0-46.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.55,0.37   Confidence: HIGH] 

# Array family : NA
//