Array 1 4049-4617 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP032626.1 Apilactobacillus bombintestini strain BHWM-4 chromosome, complete genome		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
      4049	    36	 100.0	    30	....................................	TCAACGATCATTACGTTTACCAAGTACCAC	
      4115	    36	 100.0	    30	....................................	GGTAATGGAAAAACACTTAATGGGTATGTA	
      4181	    36	 100.0	    30	....................................	AACACACCAGATACATATCATCAAAATATA	
      4247	    36	 100.0	    30	....................................	CGTCTTGTCCTTTAATAACGTTGGATAAAT	
      4313	    36	 100.0	    29	....................................	AAAAAAGTGCTTGCATTCTTCTAATTATC 	
      4378	    36	  97.2	    30	...........................G........	AGATTTCTTCGCTGGATTTTCTGATTCAGG	
      4444	    36	 100.0	    29	....................................	AGAAAACGCTACAAACGAATACCAAATCC 	
      4509	    36	 100.0	    30	....................................	TGAATTGCTCCACTGTCGTCAATAAAGCAC	
      4575	    36	  91.7	     0	.........................C.T.......T	|                             	AATT,A,GA [4599,4609,4613]
==========	======	======	======	====================================	==============================	==================
         9	    36	  98.8	    30	ATTATATCTTAGCTGATTTTAAAAGGAAACTATAGC	                              	       

# Left flank :   ATGGCAATTATCAATCGTTATCTAATGCTGTTAAAATATTTGTTAATTCTTATAAAGAGTGTTGTATATCTTCATCCCCTTCAAAACTGCTTTTACCTAATGAGATAAAACTAAGAGAACATGAATACGAATAATTTTATGCGATTAATTGTAATGTTTGATTTACCCGTAGTTGAAAAAGAAGATAGGAGAAATGCAGCACACTTCAGACAATTCTTAATAAAGAATGGATACATCATGCTTCAATATTCAGTGTATTATAGAATCGTTAATGGTTTAGACATGGCTAAGAAACATGAGAAAAAGCTTAAGAATGTAGTCCCACATAAGGGATCAATCAGAGTATTAAGAATTACAGAAAAGCAATTTAACAGTATGAAAATTCTTGCTGGATATAAATCCGACAATGAAAATAAAATAAACTCTAATCTTTTGACCAAATTTTAGACAAGCAAAAACACCTATACATGCTTATGTATAGGTGTTTTTTATAAATACAT
# Right flank :  TATACCACTAACAGCATTGCGATTTTTTAATTATATATTTTGATAAGTCTTCAAATCAATCATCGAGATCAGTATCCCGTTCCAATAACATCTTAGCCATTTCCCTCCCTATCTTGTCCATCAACTCGCCATCAAATGCAATAGGAGATTGGCTGGTCATATCTCTACTCCGATGAGATTGATGCATCAGACGCTCAATATCCTTCCTATGTACTAAAAACTCATGCAATGTATATTCTTTCATTCGTCTAGTATCATCTAATTTGCCTATTAAATAATTAATAGTAGTATTTACTGCCAAAGGTAAACTACCTGTGCAGTCATTTAATAAAACTTTTTTATGCATACCAATAAGCTGCTCAAAACTTACTAAATCAACATTTATCCAAGAATGAGTACGTGACTTTTTCTTTGCAGTTAACGGTACAAAAGACGCACAAGAAGTAACAAAAGGTTGTTTTTGTCTTACATTCAAATACTTAGCAATACTATGATTACGA

# Questionable array : NO	 Score: 3.25
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     ATTATATCTTAGCTGATTTTAAAAGGAAACTATAGC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:75.00%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [-0.20,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.41,0   Confidence: MEDIUM] 

# Array family : NA
//