Array 1 1372680-1371759 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_OU015321.1 Cloacibacterium caeni isolate Isolate2 chromosome 1		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                                      	Insertion/Deletion
==========	======	======	======	====================================	=====================================================	==================
   1372679	    36	 100.0	    29	....................................	ACCCAAGCGAAAACGAATTATACCACAAA                        	
   1372614	    36	 100.0	    30	....................................	AGAACGCATTGTTATTTGCTTTTGAAATCA                       	
   1372548	    36	 100.0	    30	....................................	ATTCTCTGTAAATGCTTATTGAGATACTTA                       	
   1372482	    36	 100.0	    30	....................................	CCTACCAATTTCATGTCAATTGGAGTTTTC                       	
   1372416	    36	 100.0	    30	....................................	CAATTATCATAACCAAGGTAACGTACAAGT                       	
   1372350	    36	 100.0	    30	....................................	AATAATAAAATCTATGAATGCAATCGTGGT                       	
   1372284	    36	 100.0	    30	....................................	CAAGAATTAGAAACAAAAACCATCTATTTA                       	
   1372218	    36	 100.0	    30	....................................	AAACTTCAAACTTGGGTTAAGGACCATTAT                       	
   1372152	    36	 100.0	    30	....................................	TTATAACTAACACTTAAACCTTAATACAAT                       	
   1372086	    36	 100.0	    30	....................................	GGATTCGATGGAACCGAAAGCGCAGGAGTA                       	
   1372020	    36	  97.2	    30	.......................T............	CAATTAGAGAAGAACAAATATTTGGCTTAT                       	
   1371954	    36	  91.7	    53	..........................G.....GG..	CGACGAAGTCAATTAACGATATTAAAATATTGGCGGAATTTTCTACATCAACG	GAGCC [1371924]
   1371860	    36	  94.4	    30	.........................TT.........	TTTGTGCTAGTCAAAAGAATCGGACTAACC                       	
   1371794	    36	  77.8	     0	..........................CCGA.GA.CG	|                                                    	
==========	======	======	======	====================================	=====================================================	==================
        14	    36	  97.2	    32	GTTGTGGTTTGATTAAAGATTAGAAAAAACGATATT	                                                     	       

# Left flank :   AGAAATAACCATCATGTATTAATTTATAAAGATGAAAAAGGAAATCTAAAAGAAGAAGTGGTAACATTTTGGACGGTTGTAGAACGCAAAAGAACAGGACAGTCAGTGTATCAACTACCTCTTGATGGAAAAGAAATAGTCACTACTTTGCATATCAATGATATGTTTTTATTAGGTTTAAGCGAAGATGAAATCAATTGGGAAAACCCAGATTATAAAGTTTTAAAAGAGCATTTGTATAGAGTGCAGAAATTTACATCGGGTGATTATTATTTTAGAAAAGCACTAACATCATCAATACAAAATCTTGAAGAAAAACAACAAATAAATAGTTTTGGTTTTGGTAAAAATGGTTGGTCAACACATAATCCAATAAAAGTAAAAATTTCAGTTTCAGGAAAAATTATTCCATTTTAACTAATTTCGTATAAAGTTCTTTGACATTAACGGATAATCATAAGCAACCAAACCACAACGGAGTTTCGGCGATAGCTCACTTC
# Right flank :  AGGTTCGACGAAGTCAATTAACGATATTAGTTGGCTCTCTACCTTCTAATAATCAATAGGTTAATGATGAAATATCGTACATAAAAATGCTTCTTTTTTGCCTTGATACAGCAAGATTGAAGCATTTTTTGTTTTCTATGTGTTGAATTTTTAGTTTTTAATAATCAATAGGAACGGGCTTTAGCCCGTTTTGAAAATTAAAAGATCTAATGGCTTTAGCCAAAAGTTAAAAGATAATTTTTTTCTCTAAAATAGTTCTAATTGTACTGGCTGAGGTGATTTTGGCACTTCGGATTTTCCCCAGAAATCATTAACAAAGCCTATAGAAGCCACAATTTTCTAAATAATTTCCCCACCAACCTGATCTGCTGTATCTTTGTAGAAAATACTAGAAATTGAATCTTAGAAAATTAGCCGATAAACAGAATGTTTTCTTGTTGCTGTTGCTGGTGATGGTTTTGGCGGGAAAACTCATTCCTTACCAAGAATCTTACAATCAA

# Questionable array : NO	 Score: 6.15
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:-0.04, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTGTGGTTTGATTAAAGATTAGAAAAAACGATATT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:75.00%AT]
# 	Reference repeat match prediction:         R [matched GTTGTGGTTTGATTAAAGATTAGAAAAAACGATATT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-1.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [11-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [63.3-56.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.28   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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