Array 1 1733-2362 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAESHQ010000411.1 Acinetobacter baumannii strain M03 NODE_411_length_2433_cov_5.446661, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================== ================== 1733 30 93.3 30 ............................TA CTGAAAGAGTAACTAACTGTTTAAAGAAAC 1793 30 93.3 30 ............................TA TTCCTATTTATTTTGAGCCTAATACACCAA 1853 30 100.0 30 .............................. TTGATATGATTATTAATATTAAAGTTGTTT 1913 30 96.7 30 ............................T. TGCCCATTCCCGCAAACACGGCGCAACGCT 1973 30 93.3 30 ............................CA TGACCCAACCACGTAAATTCATACCACACG 2033 30 93.3 30 ............................GC TCCGTAATTAATCAAGAAATAATCAAATTT 2093 30 100.0 30 .............................. TAGTTGCACCAGACTCCGCACAATCTAAAA 2153 30 100.0 30 .............................. CAAATAGATCAACTGGTGCGCCCTATGAAT 2213 30 96.7 30 .............................T CATCGAAATTTAGTTCTAATTCTTTAATTT 2273 30 100.0 30 .............................. TCTTTAATGTCGGCAGACGTCAGCTCAAAG 2333 30 70.0 0 A..TG.......CA..A...G...A....C | ========== ====== ====== ====== ============================== ============================== ================== 11 30 94.2 30 GTTCATGGCGGCATACGCCATTTAGAAAAG # Left flank : GCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTATTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AACTAGGAAGGATCAAACCTCGCAACGAATGTTCTCTTCTTGTAACGCCCATCTAGCAACGAAAAGATAAA # Questionable array : NO Score: 5.58 # Score Detail : 1:0, 2:3, 3:0, 4:0.71, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.61, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 52-742 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAESHQ010000104.1 Acinetobacter baumannii strain M03 NODE_104_length_11733_cov_10.953042, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 52 30 100.0 30 .............................. AAATATGCTGCTTTAACCCGCCAAACGAAT 112 30 93.3 30 ............................TG CATTAAGACGAATGCGGGCAATTGGTAATG 172 30 96.7 30 .............................A GATTCAAGTTTCACCGGATGGCACAAGTAA 232 30 93.3 30 ............................AC CAGAAAAGCAGAGTAAAGCTTCACAGCCAT 292 30 100.0 31 .............................. AAAAAAGAACATTTCCAGCAAAAATTGACGA 353 30 96.7 30 ............................T. GCTGCCTGCAAACTTGTTTGGGGCTTTATG 413 30 93.3 30 ............................AC TGGAATTCAGCAGTAAATAAGGGGTTAAGA 473 30 96.7 30 ............................T. TAAAGCTAAATGAGGGTTAAACCTAAGAAA 533 30 90.0 30 .......T....................AA CGTGAACAATTGTTTTAGCTTTGAACATTA 593 30 93.3 30 .............C...T............ TACTGGGTTGCGGAATATATTCGCAATTAT 653 30 86.7 30 A......A.........T..........A. TTTGATCTTTACTTATTCTCGCTTCAAACA 713 30 70.0 0 .......A...T.....T..C...AGCGT. | ========== ====== ====== ====== ============================== =============================== ================== 12 30 92.5 30 GTTCATGGCGGCATACGCCATTTAGAAAGT # Left flank : GTCGTTAGTAATTATGAAAATCTCTATAGATCAGAAAAATGCTGGCAGTAAG # Right flank : TAAGATAAACAATAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTAAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGTAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCTACCAGCCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGCCAAAGTGACGGTGAAATTACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCTTTAGAGCTTGCTCAAAAAGCAATTGCCGATGGCGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.62, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.29, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAAGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //