Array 1 175298-175728 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_FBHX01000025.1 Campylobacter jejuni isolate CCN27, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    175298	    36	  97.2	    30	A...................................	AAACTAATGTGTGGATTTTTGTTTAATGCT	
    175364	    36	 100.0	    30	....................................	ATTGAAATTAACATTCATACCAGCAAGTAA	
    175430	    36	 100.0	    30	....................................	AAATCGTAGAGCTAAAACTATAGCAAGAGA	
    175496	    36	 100.0	    30	....................................	AGCTAAATTTTCATTAACTCTATTAATATA	
    175562	    36	 100.0	    29	....................................	TCAATTTAAAGAGGAAATTATTTGGAATA 	
    175627	    36	 100.0	    30	....................................	TGATTTCCATCTATCCCATTTAAATGTATT	
    175693	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
         7	    36	  99.6	    30	GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	                              	       

# Left flank :   ATAAAACCAGGTAGACATATCAAAATAGCTAAGGCTAATGAAAAATTCATCATCGCCTTACCAGGTTTTCCTTACTCGGCTATGGTAATGTTTAATCTTTACACAAGAGAGATTTTAAACTCTTGGTTACTTCAACCTAAAGACTATATTTGCAAAGCCTTTTTACAAGGAAGTTACAAGAAAAAAACACCTTATTTGGAATTTGTCGCTTGCAATATAGAGTTTAAAAATGGACGCATTTTAGCCAATCTTGAAGGCAAAAAAGAAGGCTCTAGTGCGATTATAAACAATCTTAACAATAAAGCTGCCCTTATGGTGGTGCCAAAAGAATGTGAAATGTTAGAAAATGAAAGTTTAGTAGATATTATCTTTATGCCTTAAAATTATTTAAATAATTTTATTTCGATTTTAATCAACCCTAAATTTCAATAAGTTTCAAATTCGCAACCTCCTTTTAGTGGAGTAATTAGCCCTAGTGGAGTTTCAATCCACTAGGGTTT
# Right flank :  TAGATATTTACCAGATAATGAAAATTTCGGGGTTTTTTCATGAAAAATAGCAAAAATTATGCTATAATCTCATAAGAAATTTAAAAAGGGACTAAAATAAAGAGTTTGCGGGACTCTGCGGGGTTACAATCCCCTAAAACCGCTTTTAAAATTCAAATAAATTTTGCTGATGATATTTTTCTTGTTTTTTGTTTATTTGAATTTCTTCATTATTTGAATTTTTATATTTAAATTCTCCATGACTATCTATATCAAAAAGCGTTAAATTGGTTTCGTTATTAACTTTTTCGTTAAAAACTATGCCACCAAGCAAAAGCTCCATTTTATCAAATTGCTTTTCAGTGATGATTAAAGCCCTTACATTTCCATAAGGTGGCAAAATCTTTTTTACATTTTCAATAGAACTTTTTGCAGAACTTAAACCCTTGCAAATACGCATATAAACACTAAATTGCAGCATAAAATAACCTAATTTTATAAGATTATTTCTAAATTTACTT

# Questionable array : NO	 Score: 6.24
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:77.78%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [56.7-75.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.5,0.68   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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