Array 1 181512-174700 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJFZU010000002.1 Kocuria rhizophila strain Marseille-P2672, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ====================================== ================== 181511 28 100.0 33 ............................ TCTGGTCCAATGTGTGCCGGTGCGTGCTGGCAG 181450 28 100.0 33 ............................ CCGTGACCCCCGCTTCGTGACTGGGTTCGACGG 181389 28 100.0 33 ............................ CGTCTTTTGGTCCATGTCGAGTAGTCCTTCCAA 181328 28 100.0 33 ............................ CCCGCGGGGACCCGGGTAAACCTCAATGTTGCC 181267 28 100.0 33 ............................ CGCCTCACCGCCCTGCGAGATGGAGGACAGAAA 181206 28 100.0 33 ............................ GCTATACTAGAACCACACATGAAAAGCCCCGCA 181145 28 100.0 33 ............................ TCCAAGGTTAGGTTCCTGAAAGGCCCCGGCCCC 181084 28 100.0 33 ............................ GAACGCAAAAGCCCGGGGTCTGTGTCACAACCA 181023 28 100.0 33 ............................ CGGAACTGGTCAGGCACCACAAGGGTAGACACC 180962 28 100.0 33 ............................ CTGCCGGGCCCCGTGGCGGAGAAGGTCGCTGAG 180901 28 100.0 33 ............................ GTCCCTCAAGCACATGGACTCGAAGGCCGGGTC 180840 28 100.0 33 ............................ TCATGGGCGGCGCATCAACACCACGCTGGGTGG 180779 28 100.0 33 ............................ CCGGTCCCGGCGTTCCCTCCGCGTCACCTCCAG 180718 28 100.0 33 ............................ CTCGCATGTGGTGGGTCTGGTGTACCCGGCGAT 180657 28 100.0 33 ............................ GCTGGCGATGGCACGCCCGGTCGCGGTGTCCAC 180596 28 100.0 33 ............................ CGCCTGCGCCAGGTGCTCCGAGAACACGATGCC 180535 28 100.0 33 ............................ CGGGGACACCGACTCCGCGGTCCTCGTGGACCT 180474 28 100.0 33 ............................ GTGTTCGGCGGCTCCGCTGGGGTTGCCTCCCAT 180413 28 100.0 33 ............................ GCCCCGCACGGTCGCCTATCGCGAGACCCGCGA 180352 28 100.0 33 ............................ GCACACGCCCACGGATCAGGTGCGGACGGTGAC 180291 28 100.0 33 ............................ GTTGCCGTGCGCGTCCTTGGTCTGCTCCATGAT 180230 28 100.0 33 ............................ GCGCACCGGGGCGGGTGAGGCCATCCTGGCCGA 180169 28 100.0 33 ............................ CGTGTCATTCGTACTGGACTCCTGCGCCCGTAG 180108 28 100.0 33 ............................ GTGGATTCTTACGGCGATCATCATTGTTGTGTA 180047 28 100.0 33 ............................ CTCCTCAGCGTCGGTGCCCAGCAGCGCGGCGGC 179986 28 100.0 33 ............................ CCGTGGACGTGGACCGGATCACCAAGAAGTCTG 179925 28 100.0 33 ............................ CCGTCACGGCACGAGGGAACTGAGGGGCGCGAA 179864 28 100.0 33 ............................ CCTGTGGTCACTGGTCGCCCAACAATTCGAGGA 179803 28 100.0 34 ............................ CACGGTGCCCTGGTCGGTGACGGTGACCTTGGTG 179741 28 100.0 33 ............................ CCCACCCAGAAACACCCCGCAAGGAGCCGCGAA 179680 28 100.0 33 ............................ CGGTGATGATGTCGCCGATCTGCAGGCGAGCGT 179619 28 100.0 33 ............................ CGCGGAGAAGATCCTGAGCATCCTCACCAGCAT 179558 28 100.0 33 ............................ GACCACCTACGCGCTGGAGCACGCAGGCCCACG 179497 28 100.0 33 ............................ CAAGGCGTGCGTAGAGGTCTCCCATCTGCGGCT 179436 28 100.0 33 ............................ GACCGGCGCCGCGGACAAGGGTGACATCGGTGG 179375 28 100.0 33 ............................ CGCCTACCCGGGGTCCACCATCGCCTGGTCCTG 179314 28 100.0 33 ............................ GGCGAACGTGGTGATCAACTCGGGCATCGTGGC 179253 28 100.0 33 ............................ TGGCATTGAGCGCGCTAATCAATTGCGCTTTCC 179192 28 100.0 33 ............................ CTGCAACTCATGGCTCACGACCCGTCCTCCTTC 179131 28 100.0 33 ............................ GCCGCCGTCGTCGCCGTAGAACGCCAGCCACAG 179070 28 100.0 33 ............................ GTGGAACCCGGTGACGGGGGCGAAGCGCACCCG 179009 28 100.0 33 ............................ CCCGGAGACGTGGAGGAACTACGCGCAGAAGTG 178948 28 100.0 33 ............................ CGTGCCCGCGAGCGGGCCGGTGATGAACCCCCG 178887 28 100.0 33 ............................ CTCGTCCACCGCCGGGGGATTCTCCACCGGACG 178826 28 100.0 33 ............................ GCAGCGCAACGAGTGGGTGGACGGGGAGGCCCT 178765 28 96.4 33 ........T................... CGCCCGGCCCACCTCACGGCTCACCCGTGAGGC 178704 28 100.0 33 ............................ CACCCATCCGGCGTTGATGGTGTTGCGGATGCC 178643 28 100.0 33 ............................ CCCGTCCGAAACGGCACGGCCCATCCGCTTACC 178582 28 100.0 33 ............................ GTGAACACGAGGCCCAGGGCAGACAGGGCCAGC 178521 28 100.0 34 ............................ CCCCCAGGACCGTGGCCTGGGCGGGGGTGAGGTC 178459 28 100.0 33 ............................ GCACACCACGAAGGGGTTCGAGTGGATCGACTT 178398 28 100.0 33 ............................ GTCCAACAACTACGAGGTGTTCGAGGCCATCCG 178337 28 100.0 33 ............................ CACGGTGCACGTGATCGAGGGCAAGCCCTCCGC 178276 28 100.0 33 ............................ CTTCACCGAGAGCAGCGCGTCCGGGTGCGGGGT 178215 28 100.0 33 ............................ GCGCGCTAACGTCCGCGTGTCAAGCGCACTAAC 178154 28 100.0 33 ............................ CACGGACCGGAGGTGCCGGATCCCGTTGGTGAC 178093 28 100.0 33 ............................ CGAGTCCGCAGAGAACATGTAGGAGGTGGCGAC 178032 28 100.0 34 ............................ CTTCCCGGGGTCTGTGTGATCGTTGTCCGGCACC 177970 28 100.0 33 ............................ CTGCGGGTCACGCGGGACGAGCTGGCGAACACG 177909 28 100.0 33 ............................ TCTATGTTCGCAACACACACCCACCACACAGGG 177848 28 100.0 33 ............................ CGGGCGCACGGGTGCGATGTCCGCGTTGTGCTT 177787 28 100.0 34 ............................ CGCGCCCGGGTCGGCGGGCATGTTCAGCACGTTG 177725 28 100.0 33 ............................ GGAGGAACTGATGACGGCGACGACACCACCGGG 177664 28 96.4 33 .......T.................... CCGCCGGCCCTGCCGCACTTCCGCATCCCACCC 177603 28 100.0 33 ............................ GGGGCTCACCGCCGGCACGCAGGTATTCGACGG 177542 28 100.0 33 ............................ CTCGGGGTCAGCCCCAGCACAAGTGTTCTTGGG 177481 28 100.0 33 ............................ CCCGATCGAGAACGGCGAGAACCAGGACGCTTC 177420 28 100.0 33 ............................ CCGGCGTGTTCGACAAGACCAAGACCGCCGTGC 177359 28 100.0 33 ............................ CGCCCGGCCCACCTCACGGCTCACCCGTGAGGC 177298 28 100.0 33 ............................ CACCAAGCTCCCGCGCCGGGGCACGTGGCACAT 177237 28 100.0 33 ............................ CGCGACGAGGCCGCCCGCGCCGCCCAGGGGCAG 177176 28 100.0 33 ............................ ACAGGGGTACTGCCCGCACCTGATGTGGGACCC 177115 28 100.0 33 ............................ ATCACCGGCCCGCTCGCCGGGGCGTTCCGCTGG 177054 28 100.0 33 ............................ GTCCGAGTCCAACGGCAACCCCAAGGCCGTGCA 176993 28 100.0 33 ............................ CCTGCTGATGATCGCCCGGTCCGTGATCGAGGA 176932 28 100.0 33 ............................ GCCCTCCCAGGCGGTCTTCGCCGCACCGACCAT 176871 28 100.0 33 ............................ CCGGGAGACCGCGCTGCGGCGCCTGGCGACCGT 176810 28 100.0 33 ............................ CCGGCTACTGGGGGCGGGCGCAGAAGATCGCGC 176749 28 100.0 33 ............................ CCACGAGAACACCGGCCCGAGGACGTTGCGGAC 176688 28 100.0 33 ............................ TCCACCGTCGAGCCACGTGAAGGGCTGGGTGTG 176627 28 100.0 33 ............................ CCGGACACCCCGACCAGCTGGAAGTTCACGCCC 176566 28 100.0 33 ............................ CAGGTCCGAGGCGTACTGCATGCCCACGTCCGC 176505 28 100.0 33 ............................ GTTCGTCTGCGAGTTCCCACACGGTGCCCGGCC 176444 28 100.0 33 ............................ CCGCAGGTCAGCAGGGCGTCGTGCCCGGGGTCA 176383 28 100.0 33 ............................ TCCCTCGGCTTTTGGCGCTGGTCATGGTGATGG 176322 28 100.0 33 ............................ CGAGTGCCGCACGCCGCGGAAGGTGGAGAAGAT 176261 28 100.0 33 ............................ GGAATCCTGACCATGGCAGCACAGGCAGTCACC 176200 28 100.0 34 ............................ GTGCAGGTGATCCCCACTGGACGCGCCGCCCGTG 176138 28 100.0 33 ............................ CCACGAACCTGTACGACACCATCCATGCGGTGC 176077 28 100.0 33 ............................ GGGCAAGGACTGGACCTGGTACCTGCCCGGCAT 176016 28 100.0 33 ............................ CCGCTGGATGCGGTGGATGGACTGGATCAGGTC 175955 28 100.0 33 ............................ GCGCCTGCCGCTGCGGTGATGCCGGAGCCGGAA 175894 28 96.4 33 ...........................T CCGGGGGTCCGCGTTGAGACCGTCCCAGGCGGG 175833 28 96.4 33 .....T...................... GGTGATCGAGGACGCGAACTCGGAGCGGACCTT 175772 28 100.0 33 ............................ CCTGCCGAAGATCGAGGGCAACCTGCTCAACGT 175711 28 100.0 33 ............................ CAGGGCCATCGCGTCCTGCTGGGTCTTGCCCGC 175650 28 100.0 33 ............................ GTGTCGAGACCCGCCGTTCAGATGCCGCGTGTG 175589 28 100.0 33 ............................ GAGGTGATGTTCAGGTGATCCAGAACGCCGAGC 175528 28 100.0 33 ............................ GACCACCGCCCTCCAGCTGCTCGGCACCCCCAC 175467 28 100.0 33 ............................ CGCGATCAGCTCCATCTGGAACTGGGTGCGGGA 175406 28 100.0 33 ............................ GTTGTCGGGCACCACCAGGGTGGACACCTGCCG 175345 28 100.0 33 ............................ CGGCAGAACCTCAAGCCCGCGCTCGCGGACACG 175284 28 100.0 33 ............................ GGCCCCCGCGTGGGTCCGCAAGGTTCGCGACTT 175223 28 100.0 33 ............................ CAGGGTGAACACGGAGGATGCGAGCGGGCCGAG 175162 28 100.0 33 ............................ CGCTGGAAGTCTTGGAAGAAGAAAACTCAACCC 175101 28 100.0 38 ............................ GCGCACCGTGGAGGTCCCGGAGGAGTCCGCAGGCCCCT 175035 28 100.0 34 ............................ ACAGGAGCCGATCAAGAAGGCTGACGCGGAGACC 174973 28 100.0 33 ............................ CTCCTGCTCGATCTCGTACACGAACCGTCTGGA 174912 28 100.0 33 ............................ GGTCGACGTGTACGACGGCGCCGTGGTCATGAA 174851 28 100.0 33 ............................ GCTCCAGCAGATCGAGCGCACCGCGAAGGTCAC 174790 28 100.0 34 ............................ CGGCGAGGGCGGTTTCGGCTTGGCCGTCGAGCTG 174728 28 89.3 0 .....................C...A.A | C [174704] ========== ====== ====== ====== ============================ ====================================== ================== 112 28 99.8 33 GTGCTCCCCGCGCCTGCGGGGATGAGCC # Left flank : CGACGACGCCATGTCGCTGTGGTCTGGTCGGCGTGACGGCCGCATGCCGACGGGGCAGAACTTCTCTCGGGAGGACTCATGATCGTCTTGGTCCTCTCAGCCTGCCCGGTAGGGCTCCGTGGGGATCTGACGAAATGGCTGTACGAAGTCTCTGCCGGGGTTTTCGTAGGTAAAGTCAGTGCGCGGATTCGGGAGCACCTGTGGGAGCGAGTGCTGGAGTCATCTGGCTCGGGGCGGGCCATCCTTGTATGGAATGCCAGGGTAGAGCAGGGCTTGACGTTCTCTGTCAAGGACCACCACTGGGACCCAGTGGATCTCGATGGGTTGACCCTGATGAAACGCCCCTCGCGCACCAAGCCCCGATCTTCTCCCGAGCTCAGGCCGGGGTGGAGCAAAGCCGGTGCCCGTCGCAGGTTCGGCGACAAAAAGACCTGACCGCAAAAGTGTCGAAGTCAAAGGAAAAACACCCCTCGGGGGACAATAACCCCTAGTCACCAAGT # Right flank : CGGCCGGGACAAAACGGCGAGTTCCTCTTCCATTTAGTTGTGGACAACTAAAAATTGCACAACTATAATCAGTCGCGGTCGGGTCGCGTGGCACCCGCCCTGGTCTTGCCAGCCGAGCATCCAGGGTGGCCAGTAACGAGGGGCAGCGAAGAATCTGCACCCGTTTGCGGCATCGATGTCGGCGGGTCTCGGCACTTGGGGGGTCGAGGCCCGTCAGGATCACCAGTGAAAAGGAGTCGTCATGAACGTTCTGCACACCTCCGGTCGTCCTTTCCGGCGCAGTGCGCGGGCGGAAAACCCCGCCGCGCTCTCCCCCGCCCGCCACATCGTCCGCACGGCCCTCGGCGGCTTCCTGGCCTTTGCGGGCGTCAGCCACCTGACATTCGCCCGCAACGAGTTCCAGGCCCAGGTCCCGAACTTCGTGCCCCTGGACACGGACGTCACCGTCCTCGCGTCCGGTGTGGTGGAGATTGCGCTGGGTGCCTCGCTGATCGCCGCCC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCCTGCGGGGATGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCGTGCGGGGATGAGCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //