Array 1 18085-18511 **** Predicted by CRISPRDetect 2.4 *** >NZ_NPJJ01000011.1 Prevotella sp. P5-108 contig11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== =================================== ================== 18085 31 100.0 35 ............................... TTAGGCTTGAACAACCGGAGAATGCTTGGTTATCT 18151 31 90.3 35 ..............A......TC........ TAAGGCTTGAGCAACTGTTGAATGCTTGGCCACCG 18217 31 100.0 35 ............................... CAAGATTTGAACAGCCGCCGAATGCACTACCACCT 18283 31 90.3 35 ..............T.......A.......A CAAGGCTTGAGCAACTGGAGAATGCAAAGTCGTTT 18349 31 93.5 35 ............G.T................ TAAGGTTTGAGCAACTCCAGAATGCTTGGCCACCG 18415 31 100.0 35 ............................... CAAGGGCATGGCAAAACATAAATGCTTGGGCACCG 18481 31 93.5 0 ............G.T................ | ========== ====== ====== ====== =============================== =================================== ================== 7 31 95.4 35 ATACTTGTCACCAACGGCATGGTCACAGAAG # Left flank : TATAATCTCCAATGACATTATCCTCGGTATGACAGCCTGTATAGTATTCAAAATCATTGGCCACGATAGTGGCATCTGTCAGGTCGAGGTGGTGCAGATAAGGCATTTTGTTGCGTATCGCCATGATGTCATAGCCGTTGATGGTACCCGTCACCTTCAGCGATACCACCTTGCTGAGATTGGCTTCGGTAATCATATTATGCAGCCCTGACTCCTTCTCCTGCGCAGTCACAGTAACATCATAATCCGTGATGTCACTCATAGAGAATATCTGGTCCTTATAGTTACTCCATCCCGCTGCAGTCCGATAGTCATCCACCGCACTCTCAGGCACACGGATGACAGCATACTTCCAAAGAGAACCTATTTCGAATGTGAATAGAGTCGTCGCTGCAAGCGTGATTTCTCTCGTTTGACCAAAACAGTCTTTGCCAATACTTGTTAGAGTCGCAGGTAGAGAGAGGTGGGTAATTGGACTATCTTGGAATGCCTCGTTACCT # Right flank : GCAAGGGCTTTGCAATCCATAAATGCTTGATTGTCAATCCTTGTCACCGTGTATTCTACGCCATCGACAGTAATCTTTTCTGGAATCACGATGTCGCCAGTAGCAGTTGATTTGGTAACTTCAGCAGTCTTTGCATCTGCATTAAGGTAATAATTAATACCATCTACAGTTGCTGTTTTCGCCTGTATCGCCATTGTCCAGCATAGGGCGATGAGCGTTAGGCAGATGTTGATAAAAGTTTTGTGTGTCATGTTTTATTTGATTTTAGTTAGTTATTTTATTTTCAATACTTTCTTTCCGTTCACCACATAGATGCCGCCGGGCTGCATGGTCTTCACCTCCTTGCCGTCGAGGGTGTATATCTTGCCGTGGGCGGAGGCAGATGCGGTGGGGGCGGTGATGCCCGTGGTGGTGCCTATCTGTATGCCATACTGCGGGGCAGAGGCTTGCGCGGCGGGCATCTCGAGCCAGCACTTGCCCTCGGGGATGAGAAACTCCAC # Questionable array : NO Score: 2.88 # Score Detail : 1:0, 2:0, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATACTTGTCACCAACGGCATGGTCACAGAAG # Alternate repeat : ATACTTGTCACCGATGGCATGGTCACAGAAG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.61%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.60,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 1 164800-164965 **** Predicted by CRISPRDetect 2.4 *** >NZ_NPJJ01000057.1 Prevotella sp. P5-108 contig57, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== =============================== ================== 164800 35 100.0 31 ................................... TCTATAGGCCGCATCTATTCTTTAATACCAG 164866 35 100.0 31 ................................... CATCATGGCTCCCAGCCAATTCAATCACGCG 164932 34 74.3 0 ................-....A...A.C.CGAG.T | ========== ====== ====== ====== =================================== =============================== ================== 3 35 91.4 32 TTGTGGTTTGATGTAGGAAACGGACGATATACAAC # Left flank : CTTAGGCACCGAAGACGGAGTGTCGGTGCTGAAAGGCGAATTTGCCGGTTACAAGAATTGCCATATCTATGCCGTGGCCGACAAGAGCGGCATGATATGTCGCGTCTGCGTAGAGTTCCCCAAAATGGACAAGTGGAGTGACCTCGAAAGCTGCTACTCCAGCTATAAGGACATGCTCACCGAGAAATACGGCGAGCCCAAAGTATGTGTGGAGGAATTTCAAAACAAGTATGCAGATGACGACAACAGCCGCATGTACGAAGTTCAGTTTGACCGCTGCAAATACCACAGCACCTTTGCCTGCAAGAACGGAGATATAACCCTCGAGATAACCCATCAGAAATTCGACTGCTTCGTGCAGCTCAGCTACTACGACAAAGCCAACCAGGACAAGCTGAGACAAAACATTATGGAGGATTTGTAAAGTCAAGAGGGCTAAAAACAAAAAAACTCCCACCGAAGCGGGAGTATAGGTTTTACCCTTCGGCATTACTGCCTTA # Right flank : TGCCTTTCTCCCCCAAGCGACTCCACCAGCGGATGGAAAAGCGGATGTGACGCCTCCTATATATATAATAAGGCATATATCCGCGCCCAATCCCGCCCCTTTGTGCATGGCAGAAGAAAAAATGGGGATTGAGGGATTGGAGGTCAATGTTTTTTTGTAACTTTGTAGCGTCTCTGTGGCAGACCTGGGGCTTGACAGCGCAAGCAGTTATGGCTGTGGGATAGACACGGAGCGGAAAGAAATGTTATCAAGCGATATTTCTATTTATACTGATATAGTTATGACAAATTCTACAGAGAATCTCTATCAGCTTGACGGTAGAGTGCCATTGGGCAAAGCAGTCCCATTCGGTCTTCAGCATGTACTGGCCATGTTTGTCAGCAACATTGCGCCTATCATGATTCTTGCCAGCGCCATAGGGTTGGACAAATCAGTCAGTGCGGTGCTCGTACAAAACTGTATGGTAATAGCGGGTATAGGTACGCTGGTGCAGCTCTACC # Questionable array : NO Score: 4.93 # Score Detail : 1:0, 2:3, 3:0, 4:0.57, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTGTGGTTTGATGTAGGAAACGGACGATATACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.40,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [55.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //