Array 1 5724-6353 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJGWC010000177.1 Limosilactobacillus reuteri strain GQ_1_2_1 scaffold177, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 5724 36 100.0 30 .................................... TTATCCCCGACAGGCTTTCTAAGTAGCCAT 5790 36 100.0 30 .................................... GATCAATTGCTACCCTGTCATCATCAGTAA 5856 36 100.0 30 .................................... GGATTATCAGCAATGTACGTTAATACAGTA 5922 36 100.0 30 .................................... AATTGCGCCGCACGTTCACCAAGCACATCT 5988 36 100.0 30 .................................... GCTAGAATTTACTATTTATTTTTGTGTACT 6054 36 100.0 30 .................................... ATTGTCATATCAAGTCCTGCTGCTGTATAA 6120 36 100.0 30 .................................... CGGCATTGTGGCAAGCTTTGCAGATAGTCT 6186 36 100.0 30 .................................... TGGTTAACTGTAGTTGAGGCCCTATTATTT 6252 36 100.0 30 .................................... GTACAGAATTTCTTCTATGACCGATACCCA 6318 36 88.9 0 ...........G............G.......T..T | ========== ====== ====== ====== ==================================== ============================== ================== 10 36 98.9 30 GTTTTAGATGTACTTCAAATCAATAATGTTTAGAAC # Left flank : GAATAATAATTTAACAACAATTTATTCAACGGAAATTGTAAAGTCAATAATAAAAAATTTAACAGAAGAGGATCGTCATTTGCTAGATGCTGAAGCACGTCGGCTTTATTCGAATGTTCAAGAAATTTTATTTATGACAGATTTACCGCTCGAAGTTCGTTACGATGGTGACATCAAACGATTATTAAATTATTGTAAGATTAAATTTTCACCATTAGTTCAGCAAAGCCCTTATGATATAATAAAAACAGATTTAAAGTTACATTTAGAATGTGCTGATAGTTCATGTGTTGGGTTAAGTAATGTCGCTAATTACCTAGATTCAGCTCAATTTAACGAACTACAACAACTAAACATTGAATTGAAAATTCCTGTTTTATTAATAGAATTCACAGAAATAGATAATCGTAAATACTATGGAAATGCGGATTTTTATTATATTGACAAGGATTTTGTTGATTGGAAGTTATAAACTATTAATTCAAAATTAGAAAATAATG # Right flank : TTACACGTAAACTATAACAATCACAACGATGATATTTTTAGATATACTCCAACCTCGTTTTCCCCGCCAACTTCAGCGGGGCTTTTTCATTTTCTTTTCAAACTAGTGTATAATATTTACTAAACCCATTACTAAAAGAGGTGAAAAATGATGGCGACAATTAAAGAAATTGCGGAAAAATCAGGATATTCACCAGCAACGGTTTCGCGCCTTTTGAATAATGATCAAAATTTATCGATCAGTCCAAGCACCCGCAATAAGATCATGACGGTGGCTAATGAGCTTGGCTATTGGAACAACCACAAGAAAAACTCTCAGCAGCAACCAATCCGTCCTAATCTTGCTCTATTGTATCGGGTAAGCGGTGAAGAACAACTACAAGATGAATATTTTGCGTTTTTGCGAAATGCAATTATTAAAGAAGTCGATGAGGCGGGAGCGCAGGTTGAAATCTTTAGTAATATCAAGGATTTGATTGCGGTGGCTGATTCGTTCCAAGG # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGTACTTCAAATCAATAATGTTTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //