Array 1 150887-151714 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHZQB010000001.1 Streptococcus gordonii strain SK33 Sgordonii_SK33_DanaHsu_Sia_YES_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 150887 36 100.0 30 .................................... TAACACCATGTATTGTTATGATATCATCTT 150953 36 100.0 30 .................................... CTTTAAAATCGTGCAAATTAAACATATTTA 151019 36 100.0 30 .................................... TTGGTGGCCTGGCAATGCGCCCTTACGTAT 151085 36 100.0 30 .................................... TTCCGTTTCAACAAATCATAGCGTGGGATA 151151 36 100.0 30 .................................... TAACGAAAGGTGTAACTGGTTACAGTTTAC 151217 36 100.0 30 .................................... TAGAAAAGGGAGATTTGTTTAGTCAAATTG 151283 36 100.0 30 .................................... TCAAAGGTGGTGAAAGAGGTTACATGGATA 151349 36 100.0 30 .................................... TTTTGCGTGAAATGAACAAGCTTCATTCCG 151415 36 100.0 30 .................................... CATTTATCAAGATAATCATACTAAACCAAA 151481 36 100.0 30 .................................... AGCGCTTGTTAGGGTGGTATCTGCTATCTT 151547 36 100.0 30 .................................... TTTAGAAGTTTTAAACTTACCAAGTTTATC 151613 36 100.0 30 .................................... ATGAAAAATTATGTAGTACGCTCTCACTCA 151679 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 13 36 100.0 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : ATCAACTCAATGACAAGCCCGAAGTCAAGTCCATGATTGAAAAGTTGGTTGCTACGATTACAGAATTGCTGGCATTTGAGTGTTTGGAAAACGAGTTAGACCTAGAGTATGATGAAATTACCATTCTAGAGTTAATCGATGCACTTGGTGTCAAAGTCGAAACCCTGAGTGATACACCTTTTGAAAAGATGCTAGAAATTGTCCAGGTTTTTAAATATCTTTCTAAAAAGAAACTCCTTGTTTTCATCAATGTATCCGCCTATCTGTCAAAGGATGAGTTAGTAAATTTGATAGAGTATATCCAACTCAATCAACTAAGGGTTTTATTTGTCGAACCTCGAAAAATCTATGATTTTCCGCAGTATGTGCTGGATCCTGACTATTTCTTGAACCCTGAAAATATGGTATAATAAGAGTAACAATTGGAACCTGACGAACTGTAGTCTGGCTGGGACGAATGGCGCGATTACGAAATTTCGTGAGAAAAATTTTTCTACGAG # Right flank : CGATATTAAGATTTAATTCAATTCAACCATACTAGCTAGAGGTTGGTGGGGAGTTCAAATGAGAAAGCAGATAGAAAAGTTATTAAACAGCGATATAAGCACAAGCGCAATCGCTAAAGGAGCAGGCGTTCCTTGGTCTACAGTAGCGGACCTTAGAAAAGGGAAAACCAGTATCGATAAAATGGCCCTGCTTACAGCCGAGAAATTAAATGATTTTGCGGAAGAATTAGAAGCGGAAAAGGACGATGAGCTTTACAATTAATCTATCCAAAACAACCACCTATTTAGGTGGTTGTTTTTCAGTATCTATCACTGCTTACTAGAAGAGCTTGAGCTACTTGAGCTGTCGCTGCTGGATTCAGAACTGTCTTCTGAGGAGCTGGTGCTCTCAAATTGTTCTGGGTGGAGCGCTCGATAGCTTGGAGCATCAAAGAGATCAATAGTCGATTCGCCCTTGCGTTGGCTGTAGAGACTAGTTGATTGGTCTCCTTTTTCTTCCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //