Array 1 13002-10926 **** Predicted by CRISPRDetect 2.4 *** >NZ_BLYT01000131.1 Lactobacillus helveticus strain JCM 1006 sequence131, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 13001 30 100.0 36 .............................. TAGTAAGTGATAAAGATGAAGTTTACTTGCCACAAG 12935 30 100.0 35 .............................. TGCAACACCAGCATTACTTGCATCAATTACTAAGT 12870 30 100.0 37 .............................. TACCAACTTTCATATAACGGTTTTGTTTTTTATCTTC 12803 30 100.0 35 .............................. CTTTAAAAAAAGCGTCTTACATTGTTTACCATTGG 12738 30 100.0 35 .............................. TTTATAATATCCTGCGCTCTTGACTGAATTATTTC 12673 30 100.0 36 .............................. CAAAATGGTCGATCAAGGTAAAATACCTTTGATTGA 12607 30 100.0 37 .............................. TAATGAGTTGTCACTATTGCGTTTCATAAATAGAGGC 12540 30 100.0 37 .............................. TTATCCAGATGGCTACTTTGATCGTGATGCTTGTCCC 12473 30 100.0 37 .............................. ATGCCATACTTGTCGGAAACACCGTAGTACTTTTCGC 12406 30 100.0 36 .............................. TTGTGCTTTGGTAACTGGCAACGTCCACACCATAGC 12340 30 100.0 36 .............................. TTATAAATATCATCATAGGCATCAATTAGACCCTTG 12274 30 100.0 35 .............................. TCTTTTTTAACAGCGTTAATTTTATTGCGTTCAAT 12209 30 100.0 36 .............................. ACATCAATTTGAGGAGGAACAGTAGCTACATACCCT 12143 30 100.0 36 .............................. ATCAGGAAGAAAGCCCGAACACCAAACCAAGTGCCA 12077 30 100.0 35 .............................. TATTCGATGTAGTCATCATAAATACAAATGGTTGG 12012 30 100.0 35 .............................. TAGCTTCTTTTTGATACGATTGAGCTTGACATCAC 11947 30 100.0 36 .............................. CTTGGCTTACCTTGACTAACTCCGCTTCAAAAGGGC 11881 30 100.0 35 .............................. AGATTTTCCAGCTTGTGTTGGTATTAATGTATTTT 11816 30 100.0 35 .............................. TGGCTTAATTCATGCGTACTATGCACCAGATCAAG 11751 30 100.0 37 .............................. TAATGTTGTTAATACTGTTAATGGCGATGACTGGTAC 11684 30 100.0 36 .............................. AAATAAAATACACGGTAATAAGTGGAAACCACTATT 11618 30 100.0 36 .............................. ATAAAATACACGGTAATAAGTGGAAACCACTATTAG 11552 30 100.0 36 .............................. TAGCAATAATATCCACTAATTTCAAACTGCCAAACA 11486 30 100.0 36 .............................. GCATTTGAGATTTAACAACACGTGTCATACCGGGAA 11420 30 100.0 36 .............................. GAATTAATTAAGTTGTTGGTCTTTAATGAGTTGTTA 11354 30 100.0 37 .............................. TGGAATAAGTCTTTGCGGATTTCATTGGTAAGCTTAG 11287 30 100.0 36 .............................. TGTTAAAAACGCAGAAGAAGCTCACTCAATGACCGT 11221 30 100.0 36 .............................. TACTTTGGCGAGATGGGACTAACTAACATTTTAACC 11155 30 100.0 36 .............................. AAACTTGAATGATCTATAGTACCTCTTTTTGAGTGA 11089 30 90.0 38 ............T.............G..T TTTTGAAAGTTTAATCTAAAAGTTTTAGTAGTTGGTAG 11021 30 83.3 36 ..C.........TC....G..........T AAAGCCGAATTTTACACCAACTTTACTAAATATGCT 10955 30 73.3 0 .A......C.......G...G..AA...TT | ========== ====== ====== ====== ============================== ====================================== ================== 32 30 98.3 36 GTTTTTATTTAACTTAAGAGAAATGTAAAG # Left flank : CCTATGAGCCTTATGTTATGGGATGGTAATAGATATGTATGTGATTCTGGTTTACGATATCGTAATGGATAAACAAGGTGCTAAAGTAAGTAGACATGTTTTCAAAATATGTAAAAAGTATTTAACTCATGTTCAAAATTCAGTATTCGAAGGTGAACTAACCAAGTCCCAGCTTGAAAGCTTGAAGAATGAGTTGGATAGATGGATTCGACAGAACGTTGATTCAGTGATTATATTCAAAAATAGAAATAAAGATTGGCTTGATAAAGAATTTATGGGTCAGGATTTAACTGATTTAACGTCGGATATATTCTAAAGAAGAATCTGTCGATGTAAGATACGAAGAAAATCCTGGGAGATCGACAGATTTGCAAAATGCCGGTACAATGATATTTGTGCGATTTGTCTAATGATTTTAGTGATTTTTGGATGCGTTTTTGGTTAGGTCGACAGATAGGGCCGTTGAATCTATTGATACAGTAGGACTGGTAGTTGCAACT # Right flank : GTGTGATTAAAGTCAATTAAATATAAAACATAAAGATTTATATTTAATTTACGGGAAGGAAACTACAATCAAACATCCTACTAAAATCCTACCAATTAAACTGGTAAAATAGATAAGTAAGTATAGAGAACAATTTTTATAAAAGGGGAATAAAATGGCAGATGAAAAATTACTTCTAATCGATGGTAACTCTGTAGCTTTCAGAGCCTTTTACGCTCTTTATCGTCAACTAGAATCTTTCAAGAGTCCGGACGGCCTGCACACTAATGCCATTTACGCTTTTAAGAACATGCTCGATGTCCTTTTAAAAGACGTTGATCCAACCCACGTATTGGTAGCTTTTGATGCAGGAAAAGTCACTTTTAGAACAAAAATGTATGGTGAATACAAAGGTGGACGTGCGAAAACTCCAGAAGAGTTGCTCGAACAAATGCCTTACATTCAAGAAATGCTGCATGACTTGGGTATTAAAACTTATGAATTGAAGAATTATGAAGCAG # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATTTAACTTAAGAGAAATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [16-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //