Array 1 67636-67333 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFLVR010000021.1 Enterococcus sp. MJM16 scaffold3.21, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 67635 33 100.0 35 ................................. ACTATACAGAAATGATCTCTTATACTTTGATCGAT 67567 33 100.0 35 ................................. TTGATGGATACACTAAGAAATCAATATATGCCTAT 67499 33 97.0 34 ..........A...................... TGCTCACAAAATACTGTTTATATGCTGCAATATC 67432 33 93.9 34 ..T.....A........................ CACCAATTCAAGCATTAACAATGGGCTTGAACTA 67365 33 90.9 0 .............C.......C..........T | ========== ====== ====== ====== ================================= =================================== ================== 5 33 96.4 35 GTCGCTCCTCTTGTAGGAGTGTGGATTGAAATA # Left flank : TCGCTTTCGACTGTTTTGGTTTGATAATAGTAGGTTTGACGCGAAATGTTTAAGACCTTGCACATCGCTGATATCGAGTATTTGTGTTTGTTGGCATCAATTACTTGTCTTTTCGTCCGAATATCAGCGCCGCTTGCTTTAAAATGTCGTTCTCCATTTCCAGTTGCTTATTTTTCTTTCGCAGAGCGATCAGCTCCTGTTGCTCTGGAGTAAGGTTGTCTTTTTCCTTAAAGGAGCCAGTGGTCTGAGCCTGCTTCACCCATTTATCAAAGGTAGAAGCGGTCAACTCGTACTCACGAATGATCTCGGCTCTCGGTTTTCCTGCGAGATATAAATCGACAATTTGTTGTTTGAACTCTTTTGAATAGGTTCGACGTTGACGTCTTGACATAAAAAATCCTCCAGTGTGTTTTTTCTTATTCTACACACCTTATTTTTTCTGTCTAGTCTAGTGTAGCCGATCCATATTCAAGTCTCTCTTAGATAAATTGCATCCAATT # Right flank : AGAATAAAAAGGTTGATTTAATTAAGCTAGATTTGAGTTCTAGTAAAATTGACTATATTTATGAATTGATCTGTATATAACACAATGACAAAACTCTCTCGATAATCAAAATACTCTACGTTATAATTAAACCAACATAAGAAAAAACGACATTATCGAGGTGCAGCATGGAAGTATCAAAGCCAATTATCTATGAAGTTGATTATGCAAAAGAATCTCTGAATCATTTAGAAGAAAAAATTCAGACCAAAGGGAAAAAAGAGCAAAAGGTGATGCTCAGTTATCCTACGGTTTATATCGTAAATGACAAGAAAACTCCATCAAAGTATTCCGTTTATATTGGGGAAACGAATGATATTAAACGGCGTACTATTGAACATTTAAAAGAAATTCGTGATGATTGGCAAGAATTATCGAATTCTGATCAGGCCAAGATGTTTGTAATAGGTCATGAACATTTCAACAAGTCATTAACCTTAGATATTGAAAATCGTTTAATG # Questionable array : NO Score: 5.80 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCTCTTGTAGGAGTGTGGATTGAAATA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.55%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.80,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.91 Confidence: HIGH] # Array family : NA // Array 2 69513-69013 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFLVR010000021.1 Enterococcus sp. MJM16 scaffold3.21, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 69512 33 100.0 34 ................................. ATTGATCGCTCGCATTGACGTACATTTCTGCGCG 69445 33 100.0 35 ................................. AAATATACAGGGGAGTTTTTAGAAGTGCAAAGCAT 69377 33 100.0 33 ................................. CACCTGTTGAAGTTGAACTTTTGAGAAATGCTT 69311 33 100.0 34 ................................. ATCAATATTAATTATGAAGATTTGGATGCTCCAT 69244 33 100.0 33 ................................. TAAAGAAGGTGTTTAAATGTCTGACTGGTACGA 69178 33 100.0 34 ................................. TCTTCTGAAATACTGACGACCAGTTCAAAGACCT 69111 33 97.0 33 ................................C TTGCTACAGCAATGGAAACACTACGACATAAAG 69045 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= =================================== ================== 8 33 99.6 34 GTCGCTCCTCTTGTAGGAGTGTGGATTGAAATA # Left flank : TGGTGATCTGGATGAATACCCGCCGTTTCTTTGGAAGTAGGTGATTTTATGATGATTTTAGTAACGTATGATGTGTCAACTCAAGAACGAAGCGGAGCAAAACGGTTAAGAAAAGTCGCTAAAATTTGTCAAGATTATGGCATCCGCGTTCAAAATTCCGTTTTCGAATGTATAGTCGATCAGACACAATATTTTCAGATGAAAACAAAATTATTGGACACGATTGATGAGAACAAAGACTCGCTACGAATTTATCAACTTGGAAAAAATTACAAATCAAAAGTGGAGCATTATGGCGTAAAAGAAACAATCAACGTGGAAGATTCTTTAATTTTCTAATGTGTGCGAACCACAGTCAAACATAAAATAGATAGGTCTTTCGCACCAGAAAATGCTGACTCTGATTATGTTTATGAGAAAAAAGTTTAAGAAAAGTAATGGATCCATCATTTGAATAGCTTTTTTGAACAAAATAAGGGAAAAAATACTCTTATTTTGCA # Right flank : TTGGAATGGCAACCTTTTTTTTGACAAAATTTATAAGGTGTCATAAAAACTTCGTGTTAGTGCTCCGATTGTGAGCCTTCTCGGCAGAAGCTCAATCTAAAGTGATTACGCTGCCTCTCCACCAGTGTCACATCCAAGCTCATTATCAAGGGCGTGCTTCGCCGATCTCTGGTGACGATACGCCATCGGAGTCTCATAGCCCAGTGTGCCGTGCAATCGCAGATAATTCCACCAATGTACGTAATCAAATAATTCTCGTTGTAAGTCTTCTAGCGTTTCAAATTGAGACTGACGAATAAATTCCACTTTGACCGATTTGTATGTAGACTCCGCAACCGCATTATCATAGGGACAGCCTTTCTTGCTTAAAGAACGCGTGATATCAAAGGCTGATAGAATTTCTTCAATGGTTTGATTATCAAATTCTTTTCCGCGATCTGTATGAAAAAGAGTCACATTCGTCAAAGGATAGACGATTCGAGCGAACGCCGCTTTGACTA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCTCTTGTAGGAGTGTGGATTGAAATA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.55%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.80,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : NA //