Array 1 36999-42069 **** Predicted by CRISPRDetect 2.4 *** >NZ_PRER01000002.1 Acinetobacter indicus strain IHIT33298 NODE_2_length_222018_cov_96.1728, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 36999 28 100.0 32 ............................ TTTTTTAAATTCTTCGTACTCATCCTGCACTT 37059 28 100.0 32 ............................ GAGCTAAAGAAGATCGGCAGGCAGATTTATAA 37119 28 100.0 33 ............................ TAAAACGATTATTCTGCTTTCATGCTTATGAAT 37180 28 100.0 32 ............................ ACTACCAGACATGGCAGCAATTCAGTGAGCAA 37240 28 100.0 32 ............................ TCCTGAATGCGGTCTCTTTGGCTCGGATTGCG 37300 28 100.0 32 ............................ GCTACCAATTGGCAAAGATGCAAGTTTCTTTC 37360 28 100.0 32 ............................ AGATGGCACCGCTATCCAATTGGACTATGAGA 37420 28 100.0 32 ............................ AGGAGTTTGAAGTTGTTGCTTATGCTTTTAAC 37480 28 100.0 32 ............................ AAGCAGAACTTAACTCAGCGCCAAGCTATGAG 37540 28 100.0 32 ............................ GGAACCGGGCCACATTTACCGATTGCTTCAAT 37600 28 100.0 32 ............................ AAATTAAGAGCCTTGATGAGCAAAAGCGAACC 37660 28 100.0 32 ............................ TGATAGAAGGAGGCACAGCAATACACTAATTA 37720 28 100.0 32 ............................ CTGCTCTGGTCGTTGCCCCTTTGCGAGTTGCA 37780 28 100.0 32 ............................ TTTCGGGATAGGCCCATATGCCCGCTGCCAGA 37840 28 100.0 32 ............................ TGTCTGCGTGTTAATGCAATAGCCACCACTAA 37900 28 100.0 32 ............................ TAGAGTTAATCAAACTTGCCCAAGCATGGCGC 37960 28 100.0 32 ............................ AAATTAAGAAGATTTTTACCAAGCAAAATTCG 38020 28 100.0 32 ............................ TGTTTGCCGCTTGCAATAACAGTGATAACGCC 38080 28 100.0 32 ............................ ACCAGTCCAGCGTTGACTGGCTCACAGTAAAG 38140 28 100.0 32 ............................ GGCCTGAAGATTTCCCTGACTTGTTGCCTGAA 38200 28 100.0 32 ............................ TTAGCCGATGATTTAGCACAGGCAGCGCAAAA 38260 28 100.0 32 ............................ TCACAAGAAAGCATACGTTCCGAAGGAGTGCC 38320 28 100.0 32 ............................ TAAGAGTTCAGACATCAAAGAGTCAGGTCAGA 38380 28 100.0 32 ............................ AAGATCAAAACCACTTAGGCGCAAGCTTTGAA 38440 28 100.0 32 ............................ TACGTCGCTATGCATCTAAAGAGCTTGATATG 38500 28 100.0 32 ............................ TATCGGCCTGTTCGATCATGAGCATGTCGAAA 38560 28 100.0 32 ............................ TGATTTCCCAACGATTCGATCTGACCGATCAA 38620 28 100.0 32 ............................ AAAAGGCGCTCTAAACGCTGTAATTCGCGTTT 38680 28 100.0 32 ............................ TGAAATTGCGCATTTATTGAAATTCACAAAGG 38740 28 100.0 32 ............................ ATTCATTTGTGCCAATTGCGGAAAATTCACCA 38800 28 100.0 32 ............................ ACATTTCAGCGCGAGATCTATCACCAAATTCC 38860 28 100.0 32 ............................ TAGAATGCTCGCCAGAATTTCGCCAACGCAAT 38920 28 100.0 32 ............................ AACCAGAATTGAATCCTTGCCAGTTTCTTTCC 38980 28 100.0 33 ............................ AGTACCAGACTGGCCCAGGATTAACGTTGCAAT 39041 28 100.0 32 ............................ CACCGCATCAGGCAGCCATACGTTTGGAATTT 39101 28 100.0 32 ............................ ATTGGCAAATGCTGAATACTATAAGGTTTATA 39161 28 100.0 32 ............................ TGCTGTTTATCAGAGCGACGGCATGTTAAATC 39221 28 100.0 32 ............................ TTATGCGCAACCAAAACGATCACAAGCTGAGA 39281 28 100.0 32 ............................ TTAAACTTGTTGTAGGACGCAAAATCCTTAAA 39341 28 100.0 32 ............................ TCTTGCTCACCCTGACGCACATCACCACCCCA 39401 28 100.0 32 ............................ TAAATGGTCCGTCAGGCAGTGGTAAGACTTAC 39461 28 100.0 32 ............................ ATTCAAACTGCAATCACTGGTTGCTGGCAACA 39521 28 100.0 32 ............................ ACCAGGCATTTACACAACCTATCAACCTACCA 39581 28 100.0 32 ............................ AGACAGCGCTTCGGTATCACGGTTAGACACTG 39641 28 100.0 32 ............................ TATGTTATGGCCGGCGTTGCCCGAATGAATGG 39701 28 100.0 32 ............................ TTGAGCCGGATCAGTTTGAAAATGAATTTGTC 39761 28 100.0 32 ............................ ACAAAAAACGCAGTGTCATCAGTCATCAAATC 39821 28 100.0 32 ............................ GATGCAGAAACACAAAAGCACTGGCTATCATT 39881 28 100.0 32 ............................ TATGTTATGGCCGGCGTTGCCCGAATGAATGG 39941 28 100.0 32 ............................ TTGAGCCGGATCAGTTTGAAAATGAATTTGTC 40001 28 100.0 32 ............................ ACAAAAAACGCAGTGTCATCAGTCATCAAATC 40061 28 100.0 32 ............................ GATGCAGAAACACAAAAGCACTGGCTATCATT 40121 28 100.0 33 ............................ CAGGATGATGCAGCACTGATTTTATGCCGCCGT 40182 28 100.0 32 ............................ TGCATTGATAATAAATTCAGTCATCTTTCTTT 40242 28 100.0 32 ............................ ATTAAGCCGAGCAAGATCAACTGCAATGAGTA 40302 28 100.0 32 ............................ TATATTTCGAGGGTGGCTACAATGCCGTGCTT 40362 28 100.0 32 ............................ TAATGAAACACAACCATGTTTCACCGTTTGAA 40422 28 100.0 32 ............................ ATCTGGACGAGGAACCACCGCAAGACGTTTAT 40482 28 100.0 32 ............................ TGGCCATGATGGCGATTGAATCAGGCGGCCGA 40542 28 100.0 32 ............................ TCAGAAAATCCAAGCTGGTTAAGTACATTGAC 40602 28 100.0 32 ............................ AGGCGCTCACTTAAAAGCTGCTTTCGGTTGGC 40662 28 100.0 32 ............................ ATTTTCAGATGAAAGCTCACGAATACCGTACT 40722 28 100.0 32 ............................ TTAATCTGGCCACTAATTAAAAAGCCCTCACT 40782 28 100.0 32 ............................ CATTGCTCACATTCTTTTTCTGTGTCGCGTGT 40842 28 100.0 32 ............................ GCAAAGATAGGGACATCCGCTGACGGCACGGG 40902 28 100.0 32 ............................ GCCAGGTTGGTGAAGCAGGTCTGGTCCACAAA 40962 28 100.0 32 ............................ CAAATACCACACCTAGTTTAAATACAGTTATT 41022 28 100.0 32 ............................ TGATTCTTGATTGCCCAAAATGTCCGATAAAT 41082 28 100.0 32 ............................ TTGAGTTAATTTATTTTCTTTTCTCAGTTTTT 41142 28 100.0 32 ............................ ATAAACGGTGAACCTGCATAGACTTGGATTGA 41202 28 100.0 32 ............................ TAGATATGGACGAGCGACAAGCAGTGCTTGAA 41262 28 100.0 32 ............................ TGCAAACAACTCGTCTGCAATTTCAATGACAC 41322 28 100.0 32 ............................ TTTCAAAGAATTATAAACCGCCTTTGCTGCAT 41382 28 100.0 32 ............................ TACCGAATTTTGGTCACAAATAACATAACCGC 41442 28 100.0 32 ............................ TAGAAGCCGATGACCTTATTGAATGTACGATT 41502 28 100.0 32 ............................ TTGGTTTACTTGTTCTGTGGTGAATGCCAGAC 41562 28 100.0 32 ............................ TAAATGATGTGATTCTAACTTTGACCGCCGAG 41622 28 100.0 32 ............................ AAACAACCGGAGAAGAAAAAATATCACCGCTA 41682 28 100.0 32 ............................ AGTCTGAACGTACACGGCGCTCACCGCCTAGC 41742 28 100.0 32 ............................ TAAGAGTTCAGACATCAAAGAATCGGGTCAGA 41802 28 100.0 32 ............................ ATCTAGCGGTGATTTAAATTTTATGGTTTTGG 41862 28 89.3 32 ..........ATG............... AATGATCGCGGGACGGTTGTTCTCAATCCCAA 41922 28 85.7 32 .......A..ATG............... ACTGCGCAGATGGGGAATTGCCCCTGTCCAGT 41982 28 89.3 32 ..........ATG............... TCAACATTAAGACGTTATGGTGTTGATCCAGC 42042 28 89.3 0 ..........AT............A... | ========== ====== ====== ====== ============================ ================================= ================== 85 28 99.5 32 GTTCACTGCCGGATAGGCAGCTTAGAAA # Left flank : TTAGATTTACGAAAATGGTTGGAACGATTAGAGGACTATGTACATATCACCTCTATTCGAGAAGTACCTAGCGATATTAAGAGCTATACCATTTATAAGCGTAAACAAGTAAAAACCAGTGCACAACGTTTGGCACGTCATCGTGTAAAACGTGGCGATATTGGTTTTGATGAGGCATTAGCAAGATATAGCAATGTAGTTACCAAAACGAACTTTCCATATATCGAAATGAAAAGTCTGAGCACTTCAGATCAGCAAAGTGAAAAACGTTTTAAATTGTTTATCGAAAAGCAACCTGCTGAAAAAACCGAAACTCAAGTTTTTAGTACTTATGGATTAAGTTCGGTATCATCCGTACCCGAATTTTAACCCAATATTTTTTCACTCTTTAATAGCTTAATAAAATCAATAAGTTATAATAGTAAGTTAATACTTGGGTCTTTTATGGGATTTTAAGCATAACTTGCTGTTATAGCTTTATTTTTTACGTTAAAATTATT # Right flank : ATATTTAAAATGATTCATTCAGAAAGGGGGCTAGAAGAATTTATGCTGAAAATTTATGGTGTGAAGCAAAATTAGTTTAAGAGAGTTCCTTTTTTAACAAATACTTAGTATCTTATCTCCACCATAAATGGGGGAAATATAATGAAAAAATTAATTTTAGCTTTAGCTATCGGGGTTATTTCTACTGCTGCAGTTGCTGAAAAACCATTAACTTTTAGTAAAGGATCGCCTGCTGTAATCGGTACCAGTCCAGATTATGTACATCATGAAAGCAGCTCTCAAATAAATAATACAAATCAATTTTCTATTGCGCTTGGCTATGCCGGATCAAAGTTAGGCTCTGATGAATTTCTCGGAACCGAATCTTTTGATGGCTTATTTGTGAATGCTGCTTATCAGGTACATCCTAAAGCTAGCCTTTGGGCAGAGTATATGTTCCAAAGTTCAGATATTGACTACAATCAATTTGCATTCGGTTATAAATACAAATTTCTGGAAAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGGATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGGATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //