Array 1 415543-418929 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACIGE010000002.1 Rhodocyclus tenuis strain 2761 Ga0394279_02, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 415543 28 100.0 32 ............................ ACAACGGTGAACGGATCGACTTCGATCAGTTC 415603 28 100.0 32 ............................ TTGAGTGTAATACAGGTCGAGTGCCTTATCGG 415663 28 100.0 32 ............................ ACGCCGCTGATGACAGCGGCAACAGTGACAGC 415723 28 100.0 32 ............................ GCGTCGCCGGCGCGGACCGCAGCGAAGCGAGG 415783 28 100.0 32 ............................ GAGCAGAGAAGCGACTTGCTGTTGGGGTAAAA 415843 28 100.0 32 ............................ ACTTCACGGACTTGTCATAGGTGATTTCCATT 415903 28 100.0 32 ............................ TCGTTCTGCGCCGAGAATCCGAATTCTCCGAT 415963 28 100.0 32 ............................ GAATGGCAAGGGGAGAACGCTCTACATAGGTC 416023 28 100.0 32 ............................ GTCGCGCGCGTACCAGCCTTCTTCGACGGCCA 416083 28 100.0 32 ............................ GCTTGATATCTACAGGTTGATTCGGCTTTCAC 416143 28 100.0 32 ............................ AGTTGCTGTTTGTCATGCACGAAATTGAAGGC 416203 28 100.0 32 ............................ CATCGCTGCCCTACTCTTCCTGCTGATCTACT 416263 28 100.0 32 ............................ GATCAGGATCAGCTCGTCACGACCAACAGAAA 416323 28 100.0 32 ............................ ATTCCCATCAGCAGGTCGGGCGCGTAGATCGA 416383 28 100.0 32 ............................ TGTAGCGTTTTTCGTTCTCGGTGCGCCCGGCT 416443 28 100.0 32 ............................ TTGCGGTATTCCTGATGGGTAAAGCGCGCGTC 416503 28 100.0 32 ............................ GCGCGCCGGCAGGAGGTGATCGACAAGGCCGT 416563 28 100.0 32 ............................ CTCAAGCATGACGACAACGGAACCCTGACGCT 416623 28 100.0 32 ............................ AGCGCGCGGCGGAGTTCTTCAGGTCCCTGGTG 416683 28 100.0 32 ............................ TCACCGCCTTCATTGCCGACGCAGACCTTTTC 416743 28 100.0 32 ............................ CTGAAATCCTCACCCGGTCCCCTTCGGGGCTG 416803 28 100.0 32 ............................ ATCGGGAGCTTTTGCCCGATCCGACGAACCAT 416863 28 100.0 32 ............................ ACGTGCAGATGTTCGCTCGAAGCGAACTCTCC 416923 28 100.0 32 ............................ GATTTGACCGGGCGTTTCTGCGACCGCCGCTG 416983 28 100.0 32 ............................ GTGGCGCGTGGTCTGCACGCTCGTCGAGAAGA 417043 28 100.0 32 ............................ TCGGCGAGCTTGCCCGCCAGATCGTCGATGTC 417103 28 100.0 32 ............................ TTTTGCCAGAAGGCGAAGTCAAGGAACGTGTT 417163 28 100.0 32 ............................ ATGCGCAGGAAGCGGCTCTGATCCCACACGGG 417223 28 100.0 32 ............................ ATCCGCGAAGGAAAGTCACGGCCAGCGGCTAC 417283 28 100.0 32 ............................ GAGATGATGGCGAAGCGCCATGCCGAGCTGCT 417343 28 100.0 32 ............................ TGCATGTGAATCACGCAGGAAGAAGTTAGCAG 417403 28 100.0 32 ............................ AGTTGGAGGCGCTGGCAACGTCGAGGCGGGCG 417463 28 100.0 32 ............................ GATGAGCAACACATCGCCAGAGACGACGGCGA 417523 28 100.0 32 ............................ AGGACGGCGCCGCGAAGACGACGCCGACCACA 417583 28 100.0 32 ............................ TCGGCCGCGCCGCGCTTGCGCTTGCCGAACAG 417643 28 100.0 32 ............................ TACCTGACAGGTAAGGCCCAGGGACAGATTCT 417703 28 100.0 32 ............................ CCGGTCGGCCGCGCGGCCGTTGTTGTAGCCGC 417763 28 100.0 32 ............................ GCGCGCGGCGGCCCAGCCGCGCAGCTGTTGTT 417823 28 100.0 32 ............................ TTGCGCAGCGGCGGCGTCTGCTGCGTCGGCCG 417883 28 100.0 32 ............................ GATTCTGCGGGCGTCTTCTTCTGGGTCGCCTT 417943 28 100.0 32 ............................ ACTGACACGCTGCCGGCGCCGGCCATGAATCG 418003 28 100.0 32 ............................ TTGATGTAGCCGGCCGGCGGCGTGATCGTCGG 418063 28 100.0 32 ............................ ATTATCGCAAGCGGTTGTTTTCGCTTGGGCGT 418123 28 100.0 32 ............................ CTGGTCGAAGACGGAAAACGGAATCGCGGCCA 418183 28 100.0 32 ............................ TCGTCGCCGATCTGGGCTGATGCGTCCCGGTC 418243 28 100.0 32 ............................ TCCTCGCAGACGATCTCCCAGCGATAGCTGGC 418303 28 100.0 32 ............................ ACGCCGCCAGCGAGCGCAGCGTGTCGGTGGCC 418363 28 100.0 32 ............................ TCCTTGGCCTCGCCGAAAAACTCGCCGAAGCT 418423 28 96.4 32 .............T.............. AAGCGCGAATGGCCGCGTCTGCAGCGTCTGGT 418483 28 100.0 32 ............................ ATCTGCGCAGCCTTCAGCGCCTTGCCGTATCC 418543 28 100.0 32 ............................ CGACTCGTACCGGCTGCCGCCAGACTGCGTGA 418603 28 100.0 32 ............................ TTTCCGGCTCGTCTGGATCAAAGTTTTCGCTC 418663 28 96.4 32 ..............G............. CATGCGTCGAGGATGGCTTGTTTCTTGGCGCT 418723 28 100.0 32 ............................ AGCTACCGCAAGGCATGCATGCGGATGTGGCG 418783 28 100.0 33 ............................ TTCGGCGATGCCACGCAGCTTGGCCAGCTCGGC 418844 28 100.0 32 ............................ ACTGCGGAGTTGAAGGTTTGCGCTCGTCTTCT 418904 26 82.1 0 .............T.-..-T......G. | ========== ====== ====== ====== ============================ ================================= ================== 57 28 99.6 32 GTTTGCCGCCGTGCAGGCGGTTGAGAAG # Left flank : ATGGGCGCGCGCCCTCTACGCCAGCCTCTCCGCCGGCCACGGCCTCAACTTCACCCGCCAGGAGGGCGCCGGCGCCAAGGGCAGCAAAGAAGAGCGGGTGAATTCCTTCCTCGATCATGGCAATTACATCGCCTATGGCCTCGCCGCCGTCGCCCTCAACGGTCTTGGCATCAGCTACGCTTTTCCCCTGCTGCATGGCAAAACCCGGCGTGGCGCACTGGTTTTCGACATCGCCGACCTGATCAAGGACGCCTATGTGATGCCTCTGGCCTTCACGTGCGGCGCCAACCCCCGCGTCAAGGACAACGCCTTCCGCGCCCTGCTCATCGAGACCCTCCAGGACGGCGACTCCCTTGACTTCCTGTTTGACTTCGTCAAACGGCTCTGCGAAAAAACTCTTTAATATCAATATTTTGAGAACCCCCTGAAACGACGAAGTCTGAAGCACGAATCTCAGGGGAACTCATTGTTTAAATGAATGGTTTCTGGCCATTCATCCA # Right flank : GGCTATCGTTCCACCCCGCTCCATCAGCAACCACCGCTTCAGCGCGCTTGCCAGTCAGTAACGAGAGATATTCGGGCGGGCTGTTTACGTAGTTAAGCTCCCAGTGCTTCCTCACAGCCTTGCCCGCCCGCACCATTTGCCGGAAGCTGCGAACTTCGCTTGACTTCGAGTGCACTCAAAGCCCCACCATGCCGGACGTGACCAACAACGCCATCTCCATCGGAGAGCTTTCGCGCCTGAGCGGGCTTTCCACGCACACCCTGCGCTTCTACGAAGCCGAGGGCATCCTGCAGCCTGCCGGGCGCAACTCGGGCGGGCATCGGCAGTACCACCCGGCCGATGTGCTCTGGCTTGAGTTCGTGCTCCGGCTCAAGCAGACCGGGATGCCGCTGGCCGAGATCAGGCAGTACGCGGCGCTCAGGGCGCAAGGCGAGACGACGTTGCAGGCGCGGCTGGCGATGCTCAAGCTCCATCGCGAACGCTTGGCCACCAGGATCGAA # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGCCGCCGTGCAGGCGGTTGAGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.70,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA //