Array 1 5815-5188 **** Predicted by CRISPRDetect 2.4 *** >NZ_WVUI01000411.1 Microbispora triticiradicis strain MPMI5 NODE_411_length_5989_cov_15.4582, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 5814 30 100.0 37 .............................. GGCTTGGGTCGGGAGTACGTCCGCTTGTAGACGACTT 5747 30 100.0 39 .............................. TCCAGTGCATGGACGGGTCTTTCTTGGCCTGAATGAACG 5678 30 100.0 35 .............................. ACGCCTGCCTCAATAGCAAGCTTGAGAGCGACGAT 5613 30 100.0 36 .............................. GTGGCGAGCGTCACGAGCGTTCCCTGACCGGCCAGG 5547 30 100.0 35 .............................. ACGGCGATGGAGATGCCAGCCCGCGCGAAGAGGGG 5482 30 100.0 37 .............................. GGTGAGTCAGCGAGGCCGGAACGTCGGCGCCCTTGTC 5415 30 93.3 35 .........A.T.................. GTGGAGTCCCGGAGGATTACGTCGGGCCTCCAGTC 5350 30 96.7 36 .........A.................... TGCGCCGCGATCAGCGGCGTGGTGATCGCCTCCGCA 5284 30 93.3 35 ...............G...........G.. TCGTGCTTAATTTTCGATCCCGCAGGCTTCTTGAA 5219 30 93.3 0 ..T......A.................... | AT [5192] ========== ====== ====== ====== ============================== ======================================= ================== 10 30 97.7 36 GTCCTCATCGCCCCTACGAGGGGTCGCAAC # Left flank : CGCCAGGAATGGGGCGTCGCCCAGCCCGCCCCCACGGACATCCTGTGAAGCACCCCTTGATCATGAAAGTGATTGCAGCGAACCTCCCGGGTCTCGTGCACAACCGGAGGTCCACTGCAAAATCCCGCCTCAACCAGACGCTAGAATCCCACCTGACCTGCCGCTTTATAGTGG # Right flank : CTCACGGCAGCGCTGGATCGTCTCTGGTGGTTGGGCTCCTCTCGTCCTTCATGGGGACAGCGCCGTAGGCCGATTCGTCGGAGCCGGTCGGCCGTCCCGGCGACTTCACACGCGCGGGGCGCGCCTGCGAGAAAGTTTCACGCGCGGACCCGGGCGAGGTGCCCGGGAACTGCGCGCCCTCCCGAACGGCCGATATCCGGTGCCCGGCGGGTGGCGCGGAGCGCGGCACGTCGTCCATGATCCACGGCATCCAATGATCAGGAGGCCGTGAGGATGGCGTACCAAACGAGTGGGTCGCGGCGTGTGCTCGTCGCGGTGTTCGCCGCCGTGCTCGCGGCAGTGCTGGCCGCACCACCGGCAGCAGCCGCGCGGGCAGCGGACAGTGCGGCGGCCGAGCGGAGCACGGACAGCACGGAGGCCGCCGCAGGGGGCGCGGACGGCACGGCGGGCATGTTCGGGCGGCAGGAGCTGCACTGGGGTGACTGCGCCGGAGTCGCCGA # Questionable array : NO Score: 3.15 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCATCGCCCCTACGAGGGGTCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 1812-2934 **** Predicted by CRISPRDetect 2.4 *** >NZ_WVUI01000062.1 Microbispora triticiradicis strain MPMI5 NODE_62_length_25252_cov_13.9367, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================================== ================== 1812 30 96.7 36 A............................. AGCCTCAGGCGAGGGCGTGACCATGTGGAGATGGAG 1878 30 96.7 35 A............................. TGCTCGGGGGGACAGGCCCACCGGTCAGCCAACCG 1943 30 96.7 35 A............................. TTGGCCTCGACAACGCCGTCCATGATCTGCGCCGC 2008 30 100.0 36 .............................. GGCCCGTCCAGTGGTACAGCCACCCCTCGAACCCCG 2074 30 100.0 38 .............................. CCGGTCTATCCCGCGCCTTTTCCTGTCCGCCAGACCAG 2142 30 100.0 39 .............................. CGCAGCGTTGCAGGGTCGCGTGACCCTGTACGCGGTCAC 2211 30 100.0 58 .............................. AGCAGCGCGCGGCCCGGGACATGCTGGAGCGGGTGTCCGCTCTACCGCGAAATCGGAC 2299 30 100.0 41 .............................. TAGTGCGCGCCGACCCGGTGCGCTATGCGCAGCGCGTCCTC 2370 30 100.0 36 .............................. CGCAGCTCGTGCGCGACGACCCACCTGACCGCCTCA 2436 30 96.7 40 ....................A......... CACGCGTGACCCACGATGTATAACCCGCGACCACCCTCAG 2506 30 100.0 34 .............................. GCGGTAGCAAGGGCTCGCCGCGAGGGTCAACGAG 2570 30 100.0 37 .............................. CTGCACACGACGTTCAAGCAGCCCCGCCGGCGCGTCG G [2593] 2638 30 100.0 38 .............................. AGGCGCAACGCGGAGGCCCAGTCGGGCATGGTACTCAT 2706 30 96.7 37 .......................C...... ATGACGACCATCGCGGGCTTTTTCAATGGGTCCCCCG 2773 30 96.7 35 .......................C...... CGCCTGTACCAGCGGACCTCGACGTTCGCGGTCAG 2838 30 100.0 36 .............................. TCGATCAAGATCAAGTGCTAGGTGCGGCCCTCGATG 2904 30 93.3 0 .....................T.....G.. | G [2931] ========== ====== ====== ====== ============================== ========================================================== ================== 17 30 98.4 38 GTCCTCATCGCCCCTACGAGGGGTCGCAAC # Left flank : CCGCCGTTCCCGCGCCCGCACCGCCCGCTGAGGCGGCGACCACCGCCCCGCAGCCGCGACCGCGGCGAGCGGGAGACCGTGCGGGAGACGAGGCCAAGGGCGGCACGAAAGCCGCTCCGAAGGACAGCCCGAAGGACACCGCCAAGGAGGGCCCGAAGGAGTCGAAGCCGGAGACTCCCGCTCCTCCGGTGCCGAAGCCCGCTCCTCCGCGTCCTCGCAAATCTCGTGGCCGACGGGCCTCAGTCCCGACCTGGGACGAGATCATGTTCGGCGCCCGTAAGCAGGACTGACGAGCGAGGCAGCGCTCTACCGGCTGCTACGCGCCCACATCTGCAGGACGGTCATCGCGCAGATGGCCTAATGGCATCACGCCAGACAGAAGGAGATGATCTTGATTGTGCAGCGAACCTCCCGGGGTTTCTGCACAACCGGAGGTTCGCTGCAAAAAGCCTCTTCTGTCGTGCCATCTTGCGTACGCTCACCTGCGGCTTTACGGTGGG # Right flank : CGCAGCTCAGGTATGAGGATCGGGAAGTGCATATGGCCCAGGTTCGCAGGTGACCTGGGCCAGGGCTCTCGGGATGAGGTGCTACTGCACGGTCTTGGCCTCGAACCGCTTGGCGGTCCAGTCGAGACCGGCCTGGCAGACCTGCTTGACCCAGCCGCGTACGAGCGTCTCCGCCTCGTCGGATTCGACGCCGAACTGCGTCGCCGTCCAGGCGACCAATTGACTGTCCGGCTTGGAGGCGGCGGCGCAGATGCGGGCCAGCAGCAGGCGCACCGTACGGTCTCCCTCGGCGAGGATCGCGGACAGGGCCTTCCGAGCCATTGTCTCCTCCTCGGCGCGGATGACGAGGTCCTCGGGGTTCGACTCGGGAACGGTCTGCCACGGCAGGGGCTGGTCGGCGTGGAGATAGAGAGCCACGTTGGCCATGAAGAAATCGCGCCGCAGCGACCGCAGCAGGTCGAGTTCCTCTCTCAGCAGGCGCCGTGCGGTAGCCAGATCCA # Questionable array : NO Score: 3.11 # Score Detail : 1:0, 2:0, 3:0, 4:0.92, 5:0, 6:0.25, 7:-0.06, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCATCGCCCCTACGAGGGGTCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.70,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //