Array 1 3802084-3797904 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP007511.1 Pseudomonas balearica DSM 6083 strain DSM6083 (=SP1402) chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 3802083 29 100.0 32 ............................. GCCTCGGCGCCCTCGAGCGCTGGGAGCGCCGC 3802022 29 100.0 32 ............................. TTGGCCAGCGAGCAGAAGCGCCTCGAGTCGGC 3801961 29 100.0 32 ............................. CCAAAGATGGAGAACCCGGTAGAGACGGCCGT 3801900 29 100.0 32 ............................. GCGGCCGTCCGGTTTGAGCAGGGCTGCGGCTG 3801839 29 100.0 32 ............................. CGTGCGGAATGACGAAGATCAGCTGCCCGCTA 3801778 29 100.0 32 ............................. GTTCTGCAAGCGCTCGGCGCCGCAAAGGTAGG 3801717 29 100.0 32 ............................. CGATGCTGAGCGATTGGGTGAATCGCCACTGC 3801656 29 100.0 32 ............................. CATGGGTGGAAAGCGGAATGGAGTCCGGCGCG 3801595 29 100.0 32 ............................. CAGACGCCACTGGAGTTAGCCCCGGCCGACTT 3801534 29 100.0 32 ............................. ACTTGACGTTGTGTTTCTGCGCGTTCTAATTT 3801473 29 100.0 32 ............................. CCGCTTGTTATTCTGGCGGCGCTTATTGGTGC 3801412 29 100.0 32 ............................. CGCATAAGCGCGCCGGGTTGTTCTCATGATTG 3801351 29 100.0 32 ............................. TTCTGAGCATTGCGGGCATTCCCGAGGCGCTT 3801290 29 100.0 32 ............................. TACACCTGGCAGCACACGTGCGATTCCCCCAA 3801229 29 100.0 32 ............................. GCGCTCACCAGTACGGGAGCAATACTTCTCGA 3801168 29 100.0 32 ............................. CCGTTGGGCGTCTACGCGCTTGCCCAATACCA 3801107 29 100.0 32 ............................. TATCGCGCTGGCGGCGGTTGAGCTGGCTCAGA 3801046 29 100.0 32 ............................. CGCTGGCGAATCTCGGCGATCTTGCCATTGAC 3800985 29 100.0 32 ............................. CCCATCGCCTGCGCAATCACGTTCCAGGTGCC 3800924 29 100.0 32 ............................. GCGGTCGTCAGGTTGGGTAGCGGGGTTGTGGC 3800863 29 100.0 32 ............................. ACGAAGCTCGACGGCATCGCTACCGGCGCCAC 3800802 29 100.0 32 ............................. GCCAGTTGGCGCCGAACTCTTCGGCACTGATC 3800741 29 100.0 32 ............................. CTGTAGGTCCCCATCTGTTCCTGACGAGCGAT 3800680 29 100.0 32 ............................. GAAACGATCTACAGCCGCCTGCGCATACAGCC 3800619 29 100.0 32 ............................. CACATAGCCCCGTTTGGCATTTGGCTGTGCAA 3800558 29 100.0 32 ............................. ACGCTGGTTGCCCGTTCGCGCGATGCGATGCG 3800497 29 100.0 32 ............................. GCTGAAGCGTCTCAGGCCGCAGTGACCGCCGA 3800436 29 100.0 32 ............................. TCGATGCCTAGGGTTTCGGAGTTCGTGTTTCC 3800375 29 100.0 32 ............................. CCCATGCCGCTGTGCTGTACCGTGCGCGTGGC 3800314 29 100.0 32 ............................. ACATTGAGCTTGACCTGATCCGCTGCCTGATC 3800253 29 100.0 32 ............................. TCCCAGACCTTGCTGCCGTCGATGTCGTCTTC 3800192 29 100.0 32 ............................. TCGCTTCTGGTGGCGAGAAGCCGGCTGGAAAC 3800131 29 96.6 32 ............................A ACAGGCCGGACCCAATCATTGATGAGCGGGCA 3800070 29 100.0 32 ............................. CCGATCCTTGAGCCATTCGCTATCCTTTGCTG 3800009 29 100.0 32 ............................. CAACTGTCGCGGAAGGCCTCCTCGAGCAGCTC 3799948 29 100.0 32 ............................. TTCGCCCAGTGCTGGTCCCGGTGGCGGCATCC 3799887 29 100.0 32 ............................. CTCCGGGGCCGATTTAATGTAGCGTTGATTAT 3799826 29 100.0 32 ............................. TCACCGTTCGCCGTTCGCTCACGAAATTCACC 3799765 29 100.0 32 ............................. CTGTTTGGCCGCCCGGACGAGGAGGGCAAGGA 3799704 29 100.0 32 ............................. CCACTCCGGCAGCCCGTACACCTCCTGGTTGA 3799643 29 100.0 32 ............................. ATGCCGTGTTTGATCTGCTGGACTACTTGATC 3799582 29 100.0 32 ............................. CCGAGCAGCAGGACTGACCTGTCAGGTTTCGT 3799521 29 100.0 32 ............................. GCGTCGACCCTGGACGGCTACCGCAAGATCAT 3799460 29 100.0 32 ............................. CGGAACGTGACAATCCGGCTGCCACCACTCAG 3799399 29 100.0 32 ............................. GTTGCCGGGTCATCGACCACTGAATTCCAGAA 3799338 29 100.0 32 ............................. TCGCCGACCTTGTCCTGCACATCCTTGAAGAT 3799277 29 100.0 32 ............................. TGCAGCCAGCCCATCCGGCCGCTGGAGAAGTT 3799216 29 100.0 33 ............................. GTCACCCACGGGCACGGCCACGGCGCGCGGATC 3799154 29 100.0 32 ............................. CTCGGTAAGTCGGCAGTTTCTGCCATCAAGGG 3799093 29 100.0 32 ............................. GCGGCTGAGGAACTGACCGCTGGCGATATCGT 3799032 29 100.0 32 ............................. TCAAAATGGGTTGAGTTCGATACGCCCGAGCA 3798971 29 100.0 32 ............................. AAGCTGATCGGCGCGGATACGGTGCGCGAGCT 3798910 29 100.0 32 ............................. GCCGCCGATGCGCAGGCGGTGTGGCGCTCGTT 3798849 29 100.0 32 ............................. ACCAGCAGGAACGTGCCATGACCATCGGAGAG 3798788 29 100.0 32 ............................. ATCCCAATGCCAAGCGCAACCAGAATCTTTGC 3798727 29 100.0 32 ............................. CCAACCATATGAATGCGGTGTTTCTCTCGAAC 3798666 29 100.0 32 ............................. GGCGCGGCCCTTATGTTCATCATTGCCGCCTG 3798605 29 100.0 32 ............................. GCGGGTACCGGCTCCAGTGCGGTCACTCGCGT 3798544 29 100.0 32 ............................. GATAGCGCCGGCAAGCAGGCCGCCATCGTCGA 3798483 29 100.0 32 ............................. CAGCTCGACAAGGGCTACGTCCGCACACTCGA 3798422 29 100.0 33 ............................. CGTAATAACAATAACCGCATATTCCGTCGCTCC 3798360 29 100.0 32 ............................. CCATCATCGATTCTCGGTGTGGCAGCTCAATC 3798299 29 100.0 32 ............................. TCCGCGTCGAAGGCAACCCAAGCCGGGTAGGG 3798238 29 100.0 32 ............................. GAGATGGCGGCACAGGGTGAATTGACGGCTGA 3798177 29 100.0 33 ............................. GACATGAGCCCTGCGCTCGACCAGCTCGAGGCG 3798115 29 100.0 32 ............................. GCTCGTGCCGACGCGGCTCAGGCCGAGGCCAT 3798054 29 96.6 32 ................T............ GCTGGCCTGCGCCGGTGGATGGGGCAGGTTTC 3797993 29 96.6 32 ....................A........ ACGGTGTGGCGCTCGTTCCGCAAGGCGGGCAC 3797932 29 89.7 0 ..........................TTC | ========== ====== ====== ====== ============================= ================================= ================== 69 29 99.7 32 GCGTTCCCCGCAGGCGCGGGGATGAACCG # Left flank : CGGCCGCATCATCCCGCTGATCGAGGAAGTACTCGCCGCTGGGGGCATCAACCCGCCCGAAGCGCCGCCAGAATCCGTTCCGCCGGCCATTCCCAATCCGGACAGCCACGGCGACGTCGGCCACAGGGCGAAGTAATGACCTTTCTCGTCGTCGTTACCGAAAACGTACCGCCGCGCCTGCGCGGGCGGCTGGCGATCTGGCTGTTGGAAGTCCGGGCAGGTGTCTACATCGGCGATGTCTCGAAGCGCACCCGCGAGATGATCTGGCAGCACCTCGAAGCCGGATTCGAGGACGGCAATGTCGTCATGGCCTGGGCCAGCAAGAGTGAATCCGGCTACGACTTCCAAACGCTCGGCCCCAACCACCGCGAACCCATCGACTACGACGGCCTTAGATTGGTCGCTTTCCAGCCGCCGCAACCCCCTGATCTTTAACAAAAGAACTCGGTAGATTTTTCGTGGCCGATTTTCTTCTTGTAGGACAATCGGTTACGTTTGGT # Right flank : AAGAGGCTGGCGACCCCGTGTCTACCTCGAGCCGCGGGCGTGTCCATGGCGGAGCGAGGCTCGGTGTAGCGTTTCCATTGGCCGCCCGGAGGCATCGGCCGCGCGGTGGTGCTGGCGCGGCTACACTCGATGCGCTGGGCGGAAAACGCTGCCTCGTGGGCGTTCTTGTCCGCGGTAATTTTTCTGCCTGGCGTCTTGTGCTTAGCTGCCGGTGACGGCGTGCTCGCCGGGGCTCAGCGGGACGGTCGACCTTGGTATAGCTGTCGAAATGGCCCGGGTCCCTAGAATGGGGTTGTGATCGGCGCGTTCCGCCAGGGGGCGGAGCGAACCTTTAAAGGCGAGCCGGGCAGGTCTGCCGCGGCACTCGGCCATACGCCGTCAGGTTATGCAAAGGGTATCGAGAACCGACCACGGACGAATTCAGAACAATTTCAGAGGTGTTGCATGGCAACGGATTTGAGCAAGTACATTCGCAATGCTGCGTTCATCGACAAGGTGGT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGTTCCCCGCAGGCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GCGTTCCCCGCAGGCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 3812447-3812113 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP007511.1 Pseudomonas balearica DSM 6083 strain DSM6083 (=SP1402) chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3812446 29 100.0 32 ............................. CGACGTAGCAGTCATATTCGTCATGCCAATGC 3812385 29 100.0 32 ............................. CGGTACCTGTTTTGGACTTCCAAGCTTTGGCA 3812324 29 100.0 32 ............................. TTCAGCACGTCATGCAGCACCAGGGCCTTCGG 3812263 29 100.0 32 ............................. GCCTGGATCGAGACCAACCTCCCCCACCTGGA 3812202 29 100.0 32 ............................. GCTTGGAATGCTCGCCTCCGCTCTGGCGTGAA 3812141 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 6 29 100.0 32 GTGTTCCCCGCAGGCGCGGGGATGAACCG # Left flank : TGGGTGGTGCCGGCTACGTCGAGGAAACCATCCTGCCGCGCCTCTACCGCGAGGCGCCGGTCAACTCCATCTGGGAGGGCTCGGGTAACGTGCAATGCCTGGACGTGCTGCGCGCACTGTCGAAGGAGGCCGGTGTGCTCGACGTCTTCTTCGCCGAGCTCGGTGACGGCCAGGGCGACCGCGATCTGGCGGCGCATATCGCCCGCCTCAAGCGCGACCTGCACGACACCGACGACATCCAATACCGCGCCCGCCAGCTCACCGAAGACATGGCCATCGCGCTGCAGGCCAAGCTACTGCTCGAAGCCGGCAACAGCGCCGTGAGCGACGCCTTCATCGCCAGCCGCCTGGCCACCAGCCGCCGTGCCTACGGCACCCTGCCGCGCGGCATCGCACTGCCGCCAATCCTCGACCGCTCCAGCCCGGACTGACCGACCGGCAGGCGCGGTAGATTGCGGCGATAGGGATTTTCCATTGCCCATCAGACGCTTACGATTGGA # Right flank : CTGACGGGCCTATAGTCACGAGTTTCCTTGGCATACATGAAAACTTTACCTGTTCGCACGTCCAGTATTCCGCCATGGCGCGGCAAGCCGCTAGGCTGCGATATCAAATGGCTACCTTAGGTCTTGCCAGCAAACGGTGAGACACGCTTTCAGGGAGATAGAAAGTGACGGTCCCATCTTTCTTTGCTTATTGGGGAAAGGCATCCGCGCAGGGTGAGAGTGGCGAGCGCTTTCACCTTTTGCCTTTTCATTCCCTTGATGTGGCGGCCTGCGGCCAGACTCTGATTAAGCTGCCGCATTTTTCCCTGCAGCCTTTGGCTCGTGAGCTGGGCTGGCCGCTGAGCCAGGTCGAATCGCTGTTCGTGCTGTTCCTGGCACTGCATGACCTGGGTAAGTTCGCCCGATCCTTCCAAGGGCTAGTTACCGACCTTTCCCCCGATTTAGTTCCGGCAGACCGTGACAAGCCCTATACGAAGCGACACGACACCTTGGGCTGGATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCAGGCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCAGGCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //