Array 1 15776-11983 **** Predicted by CRISPRDetect 2.4 *** >NZ_RZTW01000024.1 Desulfovibrio sp. DS-1 Scaffold24, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 15775 32 100.0 33 ................................ GAAAATGAACCCGAAACCACCCCCAACGGTGAC 15710 32 100.0 34 ................................ CAGGCTGACCACCCGCTTGCGCCCGCCCCCCTTG 15644 32 100.0 33 ................................ AAAATCCTGGCGCGCTACCTCAAACAACTGCTG 15579 32 100.0 34 ................................ GCCCTTCCGGAGCGCCGGGGGCCGGGGCGCTGCC 15513 32 100.0 33 ................................ ACCGCGCTGCGGATCACCATCAGCGAGGTCACC 15448 32 100.0 35 ................................ GTCCAGCACCGGGTGGTCGATGTCGAAGAAGTACT 15381 32 100.0 33 ................................ TCCTTCGTGTTGCGGGCGTGGGGTTAGACGCGG 15316 32 100.0 36 ................................ TCATTCGGTGGGGGTTGCATCCTCCACCGGCACCAG 15248 32 100.0 34 ................................ ATATTGGCGGCCATGGCTAACCCCCGATTTCCTT 15182 32 100.0 34 ................................ CATGGCGGCCCGAGGGTCGAGGCTCACCCCGCCG 15116 32 100.0 34 ................................ CATCCCGGAGAGGCGCGTGTCCGTCCCGGCCAAC 15050 32 100.0 34 ................................ TTGAGCGGCAAGCCAAAGTCCAACAGCGCCACCG 14984 32 100.0 34 ................................ CGTTCCGTGAAAGTCATTGCGGGCTGTCATCATC 14918 32 100.0 34 ................................ CCCGCCCGCCAGCCGTCCCCCCCGCCCCCCGCAG 14852 32 100.0 36 ................................ AACCTCTTCCGGCACGGTGAAGACGATACCCCAGAA 14784 32 100.0 36 ................................ CCAGGGCGTAACGGCGGGCACATGACCGGTACCACA 14716 32 100.0 34 ................................ CACCATCGCGCCATGTCCGTGCGCGCCCAGGTGC 14650 32 100.0 33 ................................ TTGAGGCCGTCTATCAGTTTTCTTCTTTCCGCT 14585 32 100.0 34 ................................ CGCGTGTGGGCACTTGCGCAGGCCCGGCAGGGGC 14519 32 100.0 34 ................................ CCTTGCGGGCGTAGGGGGTAGCGAAGCGGCCCCC 14453 32 100.0 33 ................................ AAGTTCTATGCCACAGGCTTCCGCGTAAGCGGT 14388 32 100.0 34 ................................ CCGTTCTGGGAGCAGCCGCCGAAGCCATGGCGGC 14322 32 100.0 33 ................................ CTGTGGGGCAGGGCCATCCGGGACGCGGATGGA 14257 32 100.0 33 ................................ TGGCTGAACGGCATCCGCAGGGGCGACGTGCAG 14192 32 100.0 35 ................................ TGCAGTACCCGACCGCGCGGACACAATCCGCCGGG 14125 32 100.0 34 ................................ TTTTGCTGCCAAGACAACCGGACAAACCCAGACG 14059 32 100.0 34 ................................ GGCCACGCTTGGCCGTGCTCTTCCGCGCTCGATG 13993 32 100.0 36 ................................ CTTCACTCCGGAGTTCCACAGTTCGCTGTTACGGGC 13925 32 100.0 33 ................................ CACCTCGGCGGACGTGTCAATCACGGCCAGCGA 13860 32 100.0 34 ................................ GAGCGTGCGCAAGCAAACGACCCGTGGAAATGGG 13794 32 100.0 33 ................................ AGGAAAGGCGATAGTGCATCGGCTGCGAAGCCA 13729 32 100.0 33 ................................ TATTCGGACAATGCCGCAGAGCATGCGCCGGAG 13664 32 100.0 35 ................................ CGGCCACCTCGGGCGGGCCAGCGTCAGCATGACCG 13597 32 100.0 34 ................................ GTGGCCGTAGGGGTGAGGTAGTCATGCCGTTCAT 13531 32 100.0 34 ................................ ATCGTAGGTGCGGGTGGCCAAACGATGCTGTCTG 13465 32 100.0 34 ................................ CTGCGCGACGTGCTGGAAATCGTCAGCGGCACGC 13399 32 100.0 35 ................................ CTCGCAGATGAAGGGGCCGGACGGCATCAAGGCCG 13332 32 100.0 35 ................................ ATCTATCCCCATGTACTTGATGGTGATGGACGAAC 13265 32 100.0 33 ................................ CGCATCGCGGAATAACGAGAGGGGGCTTTTGGC 13200 32 100.0 33 ................................ ACGTGTGGAGGGGTGACGCATGACCATGATCGC 13135 32 100.0 34 ................................ CTTGTCCGTGGTAAACGAGCACAGGGCGTGCAGG 13069 32 100.0 34 ................................ GTGAGTGACCCGGTGTCTGTGGTGCAGGCCAGAG 13003 32 100.0 33 ................................ CGTCATCATCAACGTAGCTGACGGCACCAATCT 12938 32 100.0 33 ................................ ACGGTGCAGGAAAACAACCTGCTGCTCTACGAC 12873 32 100.0 35 ................................ AAGACGCGCGGCGGGTGGTACGACGAGCCGTGTAT 12806 32 100.0 33 ................................ CGCAGGGGCTTTCTCCGGAGCGACCGCCCTAGC 12741 32 100.0 33 ................................ GGGTTTGGTGCCGTTTTTTATTTGTTCGGCAAG 12676 32 100.0 33 ................................ TTCATCCAGCCGGATTTCTCCGGACTTCGGCAG 12611 32 100.0 35 ................................ TCGAAGGCGCGGGCCTCCGCCTCGTATTGCGTCGC 12544 32 100.0 35 ................................ CTGCTATCATGTACGCGCAAGATACCGGGGTGTTA 12477 32 100.0 33 ................................ TGGTGGGGCTGGCGTGCCAGCCCGTGTGGGTCT 12412 32 100.0 35 ................................ CAGCGGTTCGTCAAGGCGCTGCGCAGGTTCGGCTA 12345 32 100.0 35 ................................ TTCCACCGTCATATCGCTGCCGTGCGAAAGGGACG 12278 32 100.0 33 ................................ GGCGGCATCGAAATGCCCGCCCATGCCCCGCAG 12213 32 100.0 34 ................................ CCTACTCTGGTTGCGCGGCTTCTGCCGGTCTGGT 12147 32 100.0 35 ................................ TGGATGCCCAGTTGGCGCGATGCGGACCTGACCCT 12080 32 100.0 34 ................................ GCGCGGGAGGTGCTGCGCCGCCCCACCCTGACCC 12014 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 58 32 100.0 34 GTCGCCCCTCACGCAGGGGCGTGGATAGAAAC # Left flank : CCCCCGTTCTTGTGGAAATAGCCATGCTCATGCTCATTACCTACGACGTGAACACCGAAGACCGCGAAGGCAAAACCCGCCTGCGCCGGGTAGCCAAGCTCTGCCTGGACTACGGCCAGCGCGTGCAGCTTTCGGTATTCGAGTGCGAGGTGGACCCCGGCCAATGGGAAACCCTGCGCCATAAGCTTGTGTCCACCATCGCCCCGGAAAAGGACAGCCTGCGCTTCTACCGCCTTGGCCGCGACGGCAAGCGCCGGGTTGAACACGTGGGGATCAAGGAACCCGTGGACCTTGAAGGCCCCCTTGTGGTGTAGCGGCCATTGCCGCGCGAACCTGGGGCGTACGGATATTTCCCGGCAGGTTCGCGCGGGATAAAGCCTTAATGTGGAAGCAGGATACAACGCCACGCCTTCTGAAAGGCACGGACACTGTTCAAATGGCGCGAGGTTCGCGGATGCCATCCCCGTGATCCCCGCCCCGCATACGTTTTCAGGATGGCG # Right flank : CATGGCTACAAAATTGAACGCGTCGACTTCCAGGGTCGCCCCTCACCCGGGGTATAGAAACAAGAAGATAGCCGCCCGTAGACACGGGACGGCGACCGCGAGGCCCAACCACTATACGCGGCACAGCCTCTCACCGACAGCGACCCGCCGCCAGCGGGCGGAAGGCTTGGGATGGTCCGGCTGCACATCGATCCATAGGGCTGCGTGGCCTCCCGCAGCGTTGTGGGCGAGGAATCGGTGAACCTGTTCGCGGACACGGCCATGTGCACCGTGAAACGCAGGCGCCTTCCCCCCTGCGGGCGCGGCGGGCGCGACGTGGCCTGCGAGGTGGAGGCGCCGGAGGTGTTCAAGCTGCTTCGTTAAAGGGCAGGCGAACGCGCGCACGCCGGAGCCGGGAGTACCGCCCCCGTTGCCAGTGGCGCGCTTTCCGGTATGGTGGAACAAATCCCGCTTCAGGAGGCCGCCATGCCGCATGCCCGCCGCGTACCCCACGCAGAGCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCTCACGCAGGGGCGTGGATAGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCCCCTCGCGCAGGGGCGTGGATCGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.80,-7.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [45.0-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.24 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 91085-88610 **** Predicted by CRISPRDetect 2.4 *** >NZ_RZTW01000006.1 Desulfovibrio sp. DS-1 Scaffold6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 91084 32 100.0 34 ................................ AACAGTGAGACGCGCCGCGTCACATGGCGCGATA 91018 32 100.0 34 ................................ ACCCTGCACGCCGCCGATGCCGCCCGCCAGGTCC 90952 32 100.0 33 ................................ ATTTGCACTCTTTCCTAGCAACTCGCGCCCGTT 90887 32 100.0 33 ................................ TCCCGGTGCCTCGGCCTCTGCTTCCTCGTCTCC 90822 32 100.0 33 ................................ TTTGCGGTGAGTTGCACAGCCAGTTCCGCCCGT 90757 32 100.0 34 ................................ TCCCAGGGCAGCATGGGGCGGGGCGGCGCTTCGC 90691 32 100.0 34 ................................ TCCCAGTGACGCTCCGTGAAACCGCTGCGGCCAA 90625 32 100.0 34 ................................ GCGCGCGGTAATGACGATGTCGCAGACGGCCAAC 90559 32 100.0 33 ................................ CTTGCCGTAGCGGTTGATGCCGATGTCATACAG 90494 32 100.0 34 ................................ GTGCTTGTGCCGCGCCTTCGCAACAGCTTGCCTG 90428 32 100.0 34 ................................ AACCATCCGGACAGGAACTTGCGGTAGTCCACCA 90362 32 100.0 36 ................................ TGACCCAAGGGGGGCGCAAGCCCCCCCCCAAAGAGG 90294 32 100.0 35 ................................ CGTCCGCGCACGGTGTGGGACTTGCCAACCAAGCC 90227 32 100.0 33 ................................ TCATTCGGTGGGGGTTGCATCCTCCACCGGCAC 90162 32 100.0 34 ................................ TGGGACTGCGAGGTGCTGGCCCTGGCCGGAGCCC 90096 32 100.0 34 ................................ CCGTCTTGGCAATGCCTGGGACAACCTTTTGCGT 90030 32 100.0 35 ................................ CCTCGGGCCACGCTCTTCATGGGGCTGGCGCTCTC 89963 32 100.0 34 ................................ CATCGGTTGCGCCCCCTGTTGCGATAGTAGTGCA 89897 32 100.0 33 ................................ ACATTGTTGAGTCCGTCAATGTGAAGGCGGGTT 89832 32 100.0 33 ................................ CCGCCGTCTGCAATGGTCTCCATCGTGCTGCAA 89767 32 100.0 34 ................................ CACCAGCACCCCCGCTGGAAGGAAGTGATTGCGC 89701 32 100.0 35 ................................ AGGTACGCGGCAAACGCGGAAAGCTGCCCCTGCAT 89634 32 100.0 34 ................................ GAATCGCGGCGCGGGTCCGCACGATACTGCGGCC 89568 32 100.0 34 ................................ CATTCGAGCGTCTGCTGCACAGGGGTTGCGCCAA 89502 32 100.0 34 ................................ TATTTCTTGCGGTAGGGATTGGCGTTGGGATCAG 89436 32 100.0 36 ................................ TGGCCGAGGGATGGTGGCTGAAAGAGCCTGGCGAGG 89368 32 100.0 33 ................................ CCCGGCAATCACGCCCGCAAGGGCGGTGTCATA 89303 32 100.0 36 ................................ CTCCTCGATGTCAGCCGCCCGCTGAAGCCGCTGATC 89235 32 100.0 32 ................................ ATCGCGTCCGCAGCCCCGCAGGGCCTCGTCAC 89171 32 100.0 32 ................................ ACGGGCAGGCCGGAAAGGTCCACGGTCATGGC 89107 32 100.0 35 ................................ CATACCAGCCGGGGCAACATCGAAACCGCCGTTGC 89040 32 100.0 34 ................................ TGTTTCGAGTGGGCTGGATACAAGAGGGAGGGGC 88974 32 100.0 34 ................................ CAGCGCATCTTGCGGAACGCCGTCGGGGTAGCGC 88908 32 100.0 35 ................................ AAGCTCCCTGTGCCGCAGAACTCCAGGGTGCGCTA 88841 32 100.0 34 ................................ CACCAGGGACAGATTGGCGGAGTCGTCGAACGAA 88775 32 100.0 35 ................................ CGGTTCGACCCTGCCGACGGCCATACGCTGCGCCT 88708 32 100.0 35 ................................ AGCCCCAGAAATCGCCGGTAGGGGGTGTCCGCCTA 88641 32 81.2 0 .....C.T.C..G.T.......A......... | ========== ====== ====== ====== ================================ ==================================== ================== 38 32 99.5 34 GTCGCACCCTTCACGGGTGCGTGGGTTGAAAC # Left flank : CAATCGCTCATGCCGTGGAAATCCTGTGGATGTTGCGGATATGCCGGGGTTGCCGGGCAGGCCGGTCATGACCGGGTGTACCGGTTACGACCAGACGAGCCGGGTACAACCGGATGGGCCGGACATTGCCAGACATTGCCCGACATTGCCCGACATTGCCTGACATTGCCTGACGGGCTGCGCTGGCGCGGCGTCCTTCTCTTCCCCCGAAATGCGGGGCGGGTCAACCTGTACCCGCGAGCACACGAAAGACAGAGCCGTAGTGGCAGCACCGGTCACCGGGCGAGGCGCACGCCAGCCCCTAGCCGCATTGCACGCGACAACCGCGAACCTCATATGCACCGAAAAATCCCAGCGGGTCCGCGGTTGCTCAACAGCCTGCAATCACACACGTCCCCCCGCAGGGCAACACACTTTGCCCCTTTGCGCATGGACAGTCCGACCGATTCGCGGAATAGTGGTCGTCGATAAAAGCCCTCCGGAATGTCACGCTGGGGGGC # Right flank : AAAATCGGGGTGTCCGCCCGTCAGACCGGCAAGCCCCCCTCACGCCTCTCGGCACATTCCATGGCATCACACGCACGAAGGGGGCCTTGCGGCCCCCTTGTGCATGCCGAAGCGTACTCCGGCGCGATATCCTTATCAAAAGTGGCAGCCCGGCAGGTGGCGTGTCCGCCCCATGCCCGCCCCGCGTCTACCGTCTAGTCCGTCACTTCCAGGCACGCCCGGCTGCACCCGCCGCCCGCGCAGGGGATGGGGTAGTCGCCGTTGAAGCAGGCCAGGCAGTAGTTTTCGGGGTGGGACACGGAACGCAGCAGCCCGTCGATGGACAGGTAGTGCAGCGAATCCAGCCCGATGAAGCGCTCGATCTCGGCAATGGAATGGTTGGCCGCGATCAGTTCGCCCTTGGACGAAAAGTCGATGCCATAGAAGCACGGGTGCTTGATGGGCGGGCAGCTGACGCGGAAGTGCACTTCCTTGGCGCCCAGTTCGCGCAGTTTCTTCAC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTTCACGGGTGCGTGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-6.30,-6.30] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //