Array 1 108048-110526 **** Predicted by CRISPRDetect 2.4 *** >NZ_LBCT01000007.1 Streptococcus gordonii strain FSS3 Contig7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 108048 36 100.0 30 .................................... TGAAATCAAGTATGACTTGGTATTTGGCGA 108114 36 100.0 30 .................................... AGCTCAAAATTGTATAGTCCACAGTTCGGG 108180 36 100.0 30 .................................... CGGAGCTATGAGCATCTTAGTGGTGCTAGT 108246 36 100.0 30 .................................... CTAATCAGATATTTGATTATGCAATATCTA 108312 36 100.0 30 .................................... CAAGCAGATAAAAAGGAGAAATAAAATATA 108378 36 100.0 30 .................................... AGTTTCAACAATTAGTGTTTCATTTAGTTT 108444 36 100.0 31 .................................... ATCCCGCCATAAACAAAAGGTTATTACTGAC 108511 36 100.0 30 .................................... ATATTCAAATAGCAGCTCACCAAATGTTAC 108577 36 100.0 30 .................................... TTTGGAAATGTTGAAGAAGGTGAAATAGGT 108643 36 100.0 30 .................................... ATCATAGCCTTTCTTATCATCTGTCCGGTG 108709 36 100.0 30 .................................... GATCTCTATCACGACAGTTAAGGATATAAG 108775 36 100.0 30 .................................... CTTATGCCAGAGGAAATGTTACAAAATTAT 108841 36 100.0 30 .................................... ACGATTTCGCCCATCTCATAACAGAGTCCC 108907 36 100.0 30 .................................... TTTGAAAGGAGGTCAGGTATTGCCTAGGGA 108973 36 100.0 30 .................................... TCAGCGCTGATGATCGGCTCATGTGTGCCT 109039 36 100.0 30 .................................... TAGCACAGAAGGAATCGAGGTGCCATTCCA 109105 36 100.0 30 .................................... CAATTTGGTTATGAAGTCGAGAAAGAGAAG 109171 36 100.0 30 .................................... TGTTAAAACTCTTGATGACTTGAAAGAGTA 109237 36 100.0 30 .................................... AGCTTGCAATTTCTGTATTCGATTCCTTAT 109303 36 100.0 30 .................................... TTTGGATGAGTTGGCTATTTAAGATCATTC 109369 36 100.0 30 .................................... TCTGCGATGGTCACTTTTGGCTCTACCATT 109435 36 100.0 30 .................................... TCTTTTATCCGCTCTATATCCGCTAGCATT 109501 36 100.0 30 .................................... TGATGTACAGATTGATGATTCTTACCGCAG 109567 36 100.0 30 .................................... ACATCCTTCCTTTAAAAGTCAAGAGCGTAA 109633 36 100.0 30 .................................... AACATAGCCTGATACCATGCAGTTAACGAA 109699 36 100.0 30 .................................... TGTTGACCCAGAAGATGAATACTCTGATAT 109765 36 100.0 30 .................................... CTATCAGGAATACGGGACCCGTTATCAATC 109831 36 100.0 30 .................................... AGGAATCTGGGAAGGTATTAAATCCGCTGT 109897 36 100.0 30 .................................... TGATGACATGCCCGAATTTTTGAAGAAAAG 109963 36 100.0 30 .................................... TGTATACCTCAGATACTGCTTGCGGGAGCG 110029 36 100.0 30 .................................... TATCCTTACTTTAACGGCTCTTATGAGCCT 110095 36 100.0 30 .................................... TTTGAACTACATGGCCAATGGCTTCCAGAA 110161 36 97.2 30 ................................T... CGGGCATTACACGGTTACGGCTGGGGCTTA 110227 36 100.0 30 .................................... AGATGAAGCTGTCAGAGTTTGCAGATATTT 110293 36 100.0 30 .................................... AGCAACTTTAGCAATAGTGTCATACTCGTT 110359 36 100.0 30 .................................... AATCAATCTCAACGCACGAAGTATTACGTC 110425 36 100.0 30 .................................... TAGGATTGCTATCAATCAATTCCATGGATA 110491 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 38 36 99.9 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : ATCAACTCAATGACAAGCCCGAAGTCAAATCCATGATTGAAAAGCTGGTAGTTACGATTACAGAATTACTGGCATTTGAGTGTTTGGAAAACGAATTGGACTTGGAATACGACGAAATCACCATTCTAGAGTTGATCGATGCGCTAGGAGTCAAAGTTGAAACTCTGAGTGATACACCTTTTGAAAAGATGCTAGAAATTGTCCAAGTTTTTAAATATCTTTCCAAAAAGAAACTCCTTGTTTTCATCAATGCGACCGCCTATCTATCAAAGGATGAGTTAATAAATCTGATAGAGTATATCCAACTCAATCAACTAAGGGTTTTATTTATCGAACCTCGAAAAGTCTATGATTTTCCGCAGTATGTGTTGGATCAGGACTATTTCTTGAATCCTGAAAATATGGTATAATAAGGGTGACAATTGGGATCTGACGAGCTGAAGTCCGGCTGGGACGAATGGCGCGATTACGAAATTTCGTGAGAAAAATTTTTCTACGAG # Right flank : CAATATTAAGATTTAATTCAATTCAACCATACTAGCTCAAGGTTGGTGAGGGAGTTTGCGTTATTTGCAAAAAATTTAAAAAGGTTTGTTAAAATTGTTGACAACCACGGAGAACCCCAATACGATATAATCAGAAAGGAAGAAGATATGAAAATATGAGAGATTGCCGAACTAATGATAGCAACTGGAACCCTATTGACAGGGATTGCAAGTGTTATCGTGGCAATAAAAAAAGAGCCAAAAGAACGCAAGCCACACAAAGCTAAACGGTTCAAATAAGGCTCTGGTAGGTTGGGGCGAAAGCCCCTTAGACCTACCTTGATTATATCATCTCGGACAAAAAAATGAAATATTTACCAATTTTTACAATCGTATTTTTTGCTTTCTTGCTAATTTTAAAAGATAGACGGAAGTAAGGATAGAGTTCAAATGAGAAAGCAGATAGAAAAGTTATTAAACAGCGATATAAGCACAAGCGCAATCGCTAAGGGAGCAGGCGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //