Array 1 1719003-1714553 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP012545.1 Campylobacter sp. RM6914 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 1719002 30 100.0 37 .............................. GCTTTATGTGCGAGAAGGACGAAAATGAGCGATGAGA 1718935 30 100.0 36 .............................. TCACTACATAGGGCAGATACCCGCTGCCGTCTTCGC 1718869 30 100.0 34 .............................. AAAGACAAAAGCGGCAAGCTCTTGCCTAGATTTG 1718805 30 100.0 37 .............................. TCACGCTAGCGAGGGCGTAAGCGCAAGCGGGCTAAAA 1718738 30 100.0 36 .............................. GCACCCAAGCAGCCGCCTGCCAGAGGCTAAAACTCG 1718672 30 100.0 35 .............................. CAAGACAAACGGAGCAAACGTACCGCGTATTCTTT 1718607 30 100.0 35 .............................. AAGGACTGATGCTGTCTATTGACGGCTATCAAGGA 1718542 30 100.0 34 .............................. TATGGTTTTAAGCAATTTTAACGGACAATATGAC 1718478 30 100.0 34 .............................. TCCTTTAAATTTTAAGCTACGCCTAGCTGTTCTT 1718414 30 100.0 36 .............................. GCTCTGGTACTCCGCAGCTGGCAGAGCCAACGATGG 1718348 30 100.0 36 .............................. AGAGTGAAATTTTATTGTCAAATGCGATTTTCTCGA 1718282 30 100.0 35 .............................. ACCTAAACCCCAGCCCATACAGCGGAGCTATCTCT 1718217 30 100.0 34 .............................. TATTTTGATAAACGCTTTTATACTTCCTTGTTGA 1718153 30 100.0 37 .............................. GAAGCGGTAGAGGGCGACTTTGAAAGCAAGGCGCAAC 1718086 30 100.0 35 .............................. TGTCTTTTTTGACTTTTCACATGAACTGGGGGATA 1718021 30 100.0 40 .............................. AAGTCAGATACAATATCAGGAGCTATTTTGAATTCTCGGC 1717951 30 100.0 35 .............................. CCTCATTTTCTTGACCCAGCTTTGTGGGAGCAATA 1717886 30 100.0 37 .............................. AAATTTCAAGTCCCTTGTGCGTCAAAACCGCACTCAC 1717819 30 100.0 35 .............................. TCGCTAAACTTGATCTCACAAAAGGCGTCGGCTAT 1717754 30 100.0 35 .............................. TTGTTTTTTCAACACTAAAAGAAATCTGCAAATCT 1717689 30 100.0 34 .............................. CTCTCATCCACAAAATAAATTTCAGGGCTGATCG 1717625 30 100.0 34 .............................. GTAAAAACGCTAAGAATAATCTGAGTTTGCACCG 1717561 30 100.0 41 .............................. TTTAAGCGAAGTTGAAAAAGCGATCCGCAAAAACTATTTAG 1717490 30 100.0 34 .............................. CTTTATGAGATACAGCGCAGTGGAGAGCCTTTGG 1717426 30 100.0 36 .............................. AAGATACGCTAAACGGCGATGAGCTAAGCGGCATAA 1717360 30 100.0 35 .............................. TTGCGTCCAGTTCTTCTTTCGAGCCTGCATTAGCG 1717295 30 100.0 38 .............................. TAAGATCGGGATTAATTTGCTTTTCGGCGCAAATCGAT 1717227 30 100.0 36 .............................. CTCAAGTATTACAGTGAGAGTTGGGTTAAGCATCTG 1717161 30 100.0 38 .............................. TGCATCTAAGGCAAACACAACTGCACATGGTGGTAACT 1717093 30 100.0 39 .............................. TGGAGCTTAAAAAATGCGTTGCGCCGCATTTTGGAGTAG 1717024 30 100.0 39 .............................. GGAACATAAATGATCGCACAAACTTCAAGAGAGGCATAC 1716955 30 100.0 37 .............................. TCCGGTTTGTCAAATATGTAACCGCAAGTGGAGCGTG 1716888 30 100.0 34 .............................. TTATGCTGTTTGATTTGAGATTTGTAGCCGTTTA 1716824 30 100.0 37 .............................. TTTTGTGGATGAGAACAATAAAAGGGTGAGCGAGAAC 1716757 30 100.0 36 .............................. TCGGCGGTAATGCTATGTTTTTCTTACCCAGTGATG 1716691 30 100.0 37 .............................. TATTTTATTTTTTTTCGTTTGCAGCCGCGACCCAGTC 1716624 30 100.0 35 .............................. GCTTAGCGGTTCGCCGTTTTTCTCTCGCGGATAGT 1716559 30 100.0 37 .............................. ATGAAAACCACCTAAAATCAAAACCTACGGCAATAAG 1716492 30 100.0 37 .............................. TTACCCCTAGCATTCGCACTAGGCGATCGGGCTCTGT 1716425 30 100.0 36 .............................. TACCATCAATGACGAATACGACATCGGACTTGAAAG 1716359 30 100.0 36 .............................. TTTGATTTTGTAATGAGGCGGAGCAAACCGCCTAGA 1716293 30 100.0 36 .............................. TTCGTGCAGAGCGTGGCACTTCATCAAATATAAGGA 1716227 30 100.0 36 .............................. TAGAAAATTCCAGCAAAGAGAGAGAATTGGTAGTAG 1716161 30 100.0 36 .............................. AAAGCCATGTGTAAACCTCGTATTCGTTTTCGCTGC 1716095 30 100.0 35 .............................. GACCCTATCTTGTGGGACCAATACCTAGCCTACAA 1716030 30 100.0 35 .............................. GCTCGTTTATCTCGCGCTCAATGGCTTTGCTTTGC 1715965 30 100.0 35 .............................. AATAGTGGCGGTGAGCATACAACTCGTATATCACA 1715900 30 100.0 36 .............................. TACAAATAAACCCGATGAAAACGCAGTGCCGCCACG 1715834 30 100.0 36 .............................. GAAATGTTAGGCGATCCACAAAATCAAAACGGCAAT 1715768 30 100.0 36 .............................. TCACGCCTAGATCAAGCCCTGCTAGCTGCTCGCCGA 1715702 30 100.0 36 .............................. AAATATGGTTGCCGCAAAAATGGGAAGAGCTAAAAA 1715636 30 100.0 36 .............................. TGTTTCAATAAGAACATCTGCGCTAACCGGTAGTTG 1715570 30 100.0 37 .............................. GTTTAGAAATTCATCGCTTACGTCATCGTCGTAGGCG 1715503 30 100.0 35 .............................. GCTAAATACGGATCAAGCATTTGCGCGATATACGC 1715438 30 100.0 36 .............................. ACTCACTCGCTTCAAGATGTCCCAAATCCTCAAAGT 1715372 30 100.0 36 .............................. GAGCTCCAACCCATACTCCCCAGCCTTTGGCTTCGC 1715306 30 100.0 36 .............................. CGTCCAATAGTTTGCACCAGTAGCAAAACCGAATAA 1715240 30 100.0 35 .............................. AATCATTTGGTGAAAAATATGTTTTAGATGATTTG 1715175 30 100.0 36 .............................. GAAATGTTAGGCGATCCACAAAATCAAAACGGCAAT 1715109 30 100.0 34 .............................. TCCTATGCTTTCAAGGGATATTCGCCTTGACGGA 1715045 30 100.0 34 .............................. GCTACGACACAAGTAGCTCAACACTTAAAATTTC 1714981 30 100.0 36 .............................. TATTCGCCAACCATTGTTTCTTCAGATATGCTTTTT 1714915 30 100.0 37 .............................. TCGCGCGGCGTTGTGAAAAACAGGACAAAAACCGAGG 1714848 30 100.0 36 .............................. GATATTCATCTTTGTATTTTTGTTTGCTAAGGCTGC 1714782 30 100.0 37 .............................. TAGACTATAAAAGAGTGATGAGTGTTTACAACGTAGG 1714715 30 100.0 36 .............................. GTTGGCATACCTGGAACTGGTAAAACATTTTTCCCT 1714649 30 96.7 37 .............................T TGCAATGGTGGGCGGATTGGTTGGATAGCCTACTAGG 1714582 30 86.7 0 ...............A....T.......TT | ========== ====== ====== ====== ============================== ========================================= ================== 68 30 99.8 36 GTTAAAATTTAAGCCGTTGGCTTTTGAAAC # Left flank : TGAGATTTATAAGACCGAGCTAGATCCAAGGATCGGCTTTTTACACGAGCCAAACTACCGTGCGCTTAGCTTGCATCTTGATATTGCTGAGATTTTTAAGCCGATTTTGGGCGATACGCTGATCTTTACAATGCTAAATCGTCGTGAGATCACGGCAAAGGACTTTGAGACGAACGCCGGACGGATCAAATTTAGCAACGAAGCCGTGCAAAAGATCGAGATAAAGATAATCGGCAAGCTCACCGAGCAAGTAGAAATAGCGGGGCAAAAGCTCACGTGGAGGCAGGTGATCCGCCGAGAAGCCAATAGGCTTAAAAAGTGTATTTGTGAGGACGCGCCTTATGAGGGGTTTGTATGGAGATAAAGCTTGTTTTAAGCTTTATGATGACCCGATATTTTGGGCACTTGGCTGTTTGATGTGAGTAAAATTTAGCCTTTTATAAGGTAAATAGATATAGACTTTATCTTGCAAACAGCCCTAAAATGTGTGTTTTGGTGCT # Right flank : GAAATGAATGAAGACAGGCAAGGCTGGAATTTATTTTAAACGTAAAGGAGAAAGAAAATGCAAGATGTAAAACAACTCAAAGTTATGCTTGATAGATACGAAGCCTTAATTTGCCTTATTGTGTAAGATGAGCATAAAAAAGTTATTAATAGTTAGTTGTGCCCGCTCTTTTGTATCTTAATAAAGTTGCATGACTGTTATGGTGGCTCTAGTGGGTGATAATGTGGCATAAAGACAAAGAATGACAAATAAATCCCGGAGAGCTGTAGCTAAAACATGAGCTGCACACAAAAACGCATGACAGTTGAGACAATTACTTAAATGCTTATCTTTTAAGTTATGGTAATTTAACCAAAATGTTAGCTAAATATATAAAATGGTGTGTTTTTTGTTGCAAGGAAGTAATTATAGTATTATGCTGTTTGTTGTATTGAAGTAAGTGGCCGGGAGATAGGAACATCGAAACACTATAAAATCGGTATTCCAAGCCATTTTGAACT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAAATTTAAGCCGTTGGCTTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.40,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //