Array 1 139269-138941 **** Predicted by CRISPRDetect 2.4 *** >NZ_LOCO01000010.1 Marinobacter excellens LAMA 842 Contig10, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 139268 28 100.0 32 ............................ TGCTGGGGGATACCGGAACCGGGAAAAGTCAG 139208 28 100.0 32 ............................ AGGCGCGTGCGGCGGTCGGGCGTGGCGCCGTC 139148 28 100.0 32 ............................ TGAACGCGGCCCAGTCTTTCCGGCTCATACCT 139088 28 100.0 32 ............................ ATCGGCCGCACGGCTATTCGCGGCATCTACGC 139028 28 100.0 32 ............................ AGGAATAGGGGAGTACCACGGGGACCCCGCAA 138968 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 6 28 100.0 32 CTTCACTGCCGTACAGGCAGCTCAGAAA # Left flank : CCCGGATAACATGATGACCGTAGCCGCCGTAGACCGCCTGATACACCACGCGACAATTATCGAATTAGAGGGGGAAAGCTACCGACGACAGCAACAGCTTAAGCAGGCTGGAAAGAGTAAAAAGTAAGACCACTCAACCGGCCATCATAGTTGTCGCGGACCGGACAAGATAGTTGACGCCAGACAA # Right flank : CCCAGCGCCCCGCTGAAACCGGAAAGCCTGCACTTCACTGCCGTACTAAGCTCATCGTTCGTTGCTCGGGAAAGGCTTGAGCGCTGTGGTGCATGAGGAGTTGCCGCCATTGTGCTCAGTTTCCGATTGCGTAGATGCTTCCTTCAGGCCGAGCGGTGCTGATACACTCTAGTTTGCATATATACGGAACACATGCGATCTGAATAAAGCTGGCATAAGGGCAGGATTGCCCGTCAAGGAGCCCCGGGATTATTGGGGTATCAAGGAAGAGGCAAGGAGCAAAGCCATGAGCGGCAAGAAAGTTGTGCTGTTGGGGGATCTAGGTACCGACCATGAGGGTTTCCCGCCCACCCCGGTAATCAACGGTTCCCCGGATGTATTCATCGACGGCAAGCCCGTCGCTCGGGTAGGTGACCAACTTGCCCCGCACTCCAAACCCAAGCATTCCCCTCATCCGCGTACTATCGCTTCCGGTTCAAGCACGGTTTTCATTAACGGGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGTACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTTCACTGCCGTACAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [40.0-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.24 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 61296-65044 **** Predicted by CRISPRDetect 2.4 *** >NZ_LOCO01000025.1 Marinobacter excellens LAMA 842 Contig25, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 61296 28 100.0 32 ............................ AGCAGAGCGTAGACATCGGCGGTGTCCCGCAT 61356 28 100.0 32 ............................ AACAGCGCACAGGCCGCTTTGCGTGAGGAGAC 61416 28 100.0 32 ............................ ACTGATCGCTGTAGCCGTCCCATCTGGCGCTC 61476 28 100.0 32 ............................ ATCACCCTTGATGGGCTGGTCGGGAGGCGGGG 61536 28 100.0 32 ............................ GAGGGATCGTTGGTGCGAACAAACTCGGCAAA 61596 28 100.0 32 ............................ TCCCAAACCCGGCAAGAAGTCAGGGAGATGAA 61656 28 100.0 32 ............................ AATGACAAGCGTCTGACTCTCGGTAGCCTGAA 61716 28 100.0 32 ............................ TTGAGCCGGACGTTATAGCCCTGCGCTTGCAG 61776 28 100.0 32 ............................ ATCGAGCAGGGCTACCCGCTGCGACTGGAAGC 61836 28 100.0 32 ............................ GGATGGCGTTAACGTCGCCAGACTGGAACGCT 61896 28 100.0 32 ............................ GTCTCGATGGCCTCTTCCGAGCGCAGCATATC 61956 28 100.0 32 ............................ GTTGCGGGCGTTAACGCTCTCAACTTGATGGA 62016 28 100.0 33 ............................ CTGACACAGCCCGGAAAGGCCTCGACAGCACAA 62077 28 100.0 32 ............................ AAGGAGAAGAAGCGCGAGCGCGTGCTGGTCTA 62137 28 100.0 32 ............................ CGCTTCTTCTCGGGTCGCTGACGTGCTGGCCT 62197 28 100.0 32 ............................ TTGGGCGAGCCATTGAGATGGTTGATGGCAGC 62257 28 100.0 32 ............................ AGTTCAGCAATGCGCTTGTTCAGGTAAGCGTT 62317 28 100.0 32 ............................ ATGCGCGGGATTGCCAGCCTGCGGCGACAAGG 62377 28 100.0 32 ............................ TATGATGCTAAAGCGAAATACCCTTAATCCCG 62437 28 100.0 32 ............................ ATAAGGGTCGGGTTTTGATGAACTCCCCCGGT 62497 28 100.0 32 ............................ ATGCCCATGCGTCAGCCACGGCGCTTACCCTC 62557 28 100.0 32 ............................ TCCCGCTGTTGCTGACATCCTGCGCGCGGGAT 62617 28 100.0 32 ............................ ATGGCTGATGTTCTGGACGTGCTCGGAGCGAT 62677 28 100.0 32 ............................ AAGGCTGACGATTCTGAGAAAAAACCACCCTA 62737 28 100.0 32 ............................ TCATCCAGTGGCGTGTTGCTGTCCCAGGCATC 62797 28 100.0 32 ............................ TGGTTTGTCGCTTGCCAACTTGAGATGCCACC 62857 28 100.0 32 ............................ GAGAGACATTAGCGCTCTGCAACCTCACAGAA 62917 28 100.0 32 ............................ CTCACCGATATGTTCAATAATTTCACCGAGAG 62977 28 100.0 32 ............................ AATGCCAAGATGTCATCGGAGAGCCATTGGAA 63037 28 100.0 32 ............................ AGCTCTTCGCCAACATCTATATGGATGCCTTT 63097 28 100.0 32 ............................ AAAGCCGTACCCCCAGCTGGCGCTTGAGGATC 63157 28 100.0 32 ............................ TTGCGAAATGCAGCAAGGTCGAAATTGCTCAC 63217 28 100.0 32 ............................ TACCCGTTGCAATTCCTGCTGGATGCGCTCAA 63277 28 100.0 32 ............................ AGAAACGGGATTCCGGTTGGCCTCAAAGCGTC 63337 28 100.0 32 ............................ TTCCCGCCCATCCAGAGCAAAGAGCAGTGCGA 63397 28 100.0 32 ............................ ATATCCGCTATCATCGCCCACCAGCTCATGGC 63457 28 100.0 32 ............................ ACTGCACCCGCCCATGCTCGTCTACCGCTGCA 63517 28 100.0 32 ............................ AAGTGCGACAGGTATTCGCGTTCGTATTCTTC 63577 28 100.0 32 ............................ TCCGCAAGCAGGCCGAGGCGGTGGAAGAGGCT 63637 28 100.0 32 ............................ ACTGGTCGGGCACCTGATTGCCGTCATCGTCA 63697 28 100.0 32 ............................ AGACAGGCTTGAAGCTTTGCAGTCTGTACCAG 63757 28 100.0 32 ............................ TTTAACTCGGATATTCTCTTTTACGTACTGAG 63817 28 100.0 32 ............................ GTAAAACGGCACTGCTTTGAATCCAGCGCTGC 63877 28 100.0 32 ............................ TGCTTGCGGAGGACGAAAGGTTCTGAGGACTG 63937 28 100.0 32 ............................ GTAAACCGGCACTGACCAGCATCCACCGCTGC 63997 28 100.0 32 ............................ TCACATCGTAATCCAGTGACCGCCAGTCCCTT 64057 28 100.0 32 ............................ TGCTGAAAGAGATTGAGGAGGCGAGATGAGGG 64117 28 100.0 32 ............................ TACCCAAAATCCAGCTACGAGAAACAGCGCCA 64177 28 100.0 32 ............................ TTCTGATACTCGACGGCGCTCAGGCGGCTGTC 64237 28 100.0 32 ............................ TGAATGCGCATGCAATAGCGCCGGGATAAGGC 64297 28 100.0 32 ............................ ATTGCCGGGATAGCTCGCACCGTGGAAAGCCA 64357 28 100.0 32 ............................ CCCAGCTTGTCCGCCACAGAATCCAGCGAGAT 64417 28 100.0 32 ............................ TTTACCGATTCGCACAGCTGGCGCGAATCACG 64477 28 100.0 32 ............................ AGAAATAGAGACTGTCCACGTGAGGCTGTCTC 64537 28 100.0 32 ............................ CAAAAGCGAGAGTTATAGGGCTTACAGCTACC 64597 28 100.0 32 ............................ TCAAGCCGGGCCGCCATTGCATCGAACTTGCT 64657 28 100.0 32 ............................ AATTCATCGGACGGCTTGGCCAAGATCCAAGT 64717 28 100.0 32 ............................ AATTGCAGAATCCAAAGTCCGCCAGCTGGGCG 64777 28 100.0 32 ............................ TTCTCGGGCGTTGCTGAGGATGTTGGTGTCGA 64837 28 100.0 32 ............................ ATCGAGATAGCGAATCAGTAGCGTGTCTCGCT 64897 28 100.0 32 ............................ CCAGCGCTCCCCAATGTCTACCAGGCGCCAGC 64957 28 100.0 32 ............................ GATTCCGTAGGCCCGGTTTGCATAATCCAGGC 65017 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 63 28 100.0 32 CTTCACTGCCGTACAGGCAGCTCAGAAA # Left flank : CAACATTGGATCGGTTGATGAGTAGCCCCTGGCTCACCGGAATGGGAGACCATGTGTGTGTGGGTAGTCCCGGCCTGGTTCCGGACGGCGTAACGCACAGGGTCGTCAGAAGGGTTCAGGGCAAAACCAATGCTGAACGCTTGAGGCGCCGGCATGCGAAACGACATAATGTTTCGCTGGAAGAAGCACGAAGTATTATTCCGGACAGTGCCGAATGCAAACTGAAGTACCCCTTTGTAATGCTTCGGAGCCAGAGTACAGCGCGGAAGTTTCCCTTGTTCATCGAGCATTTGCCAGAGCAGTCTGGCCCGGCGGAAGGGGAATTCAACTCTTACGGCCTGAGTAAAACGGCAACCATTCCTTGGTTCTGACCCTTTTTTAGGGCTGGAATTAAGAAGTATATAAATCAATGAGATAGCGGGCTACCAGAAAAAATGGGTTTTGCCCGCTATTTTTCTATTGCTCTTTAAAAACTAGAAACTTACGGTGTATTATCGCTA # Right flank : GAAAAACCAAGAGTTTCTGCATTGGATGGAATCTTCTGTTCGGCGACAATTAGGATGACCGGTTAGCGACAATTATCTTGGCCGGTTGGGTGTAACAATTGGCCCCTTGTTTTCCATGGTGGAGCAATGGGTGCCAGGCCAACACATAACCAAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGTACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTTCACTGCCGTACAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [66.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //