Array 1 1-749 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLIS01000239.1 Acinetobacter baumannii strain ABOB03 contig-3000079, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 1 29 100.0 31 ............................. TACTATTATAATGATCTAAACCCATTACAAC 61 29 96.6 31 ............................T GCAGCTACTCGACATGTTGGTAGGGCAGATG 121 29 96.6 31 ............................C AGTCGGCTGGTGCTAATTGAATAAAATCGTT 181 29 100.0 31 ............................. GATTGAGGCGATTTTTATCGCGGACATTGCC 241 29 96.6 31 ............................C AGTCCCCGCTTTGAAGCATTCCCATCAGTAC 301 29 96.6 31 ............................T CACAGCTATCGTCTGGCTGCCGTCGCGTAGA 361 29 93.1 31 A...........................T TATTATTAAACGGGAAAAGTATATTCTTGCT 421 29 100.0 31 ............................. TACTATTATAATGATCTAAACCCATTACAAC 481 29 100.0 31 ............................. TCATCAATAAGTTGGCCTTGATTTAAATAGT 541 29 100.0 31 ............................. GATACAAACGAGTTCGCATCTCGACCAGAAG 601 29 100.0 31 ............................. TTATCCAGATAAAACCATATCTACAAAGTGG 661 29 96.6 31 ............................T CAACCTGAACACAGACATACATGTTCTATTG 721 29 82.8 0 ...GC...................AT..T | ========== ====== ====== ====== ============================= =============================== ================== 13 29 96.8 31 GTTCTTCATCGCATAGATGATTTAGAAAA # Left flank : | # Right flank : TTTGAATCTTAAAAAGAGAAAACCCCGAAACTTTCGTTTCAGGGCTTTTCACGAATCTTGGTGGAGATGGCGGGAGTTGAACCCGCGTCCGCCAGCACTACGCTCGAGAATACTACATGCTTAGATATCGTCTATTGTTTTAACACCAAGTGACCCGACGAACAGGGTACAAGGTGCGATCCTCTAAGTTTGGTATAAAGCCCCGAGGCTTGACTCTATACGGACTTGTGTGCGTGCGCTTCAGTCGGGTTCCCAGACCACAAGTATTCTAGGAAGCGGACAAGCGGCCCTTAGGCAGCTAGAGCGTAAGTTTCGTCGTTTGCGACTATTTAAATGCAAATTTTATTTACGAGAGAAAATGCGCTCTCGGCATGCATCTATGAGTTTCATCACCGGCGTCGAAGCCAATAACATCCCCATGAATGTCTGCACATCATAGCATAACTAAAATAAAATGCTGTGCATTTTATCAACAGTCTGCCACTGATGAACATACTTAC # Questionable array : NO Score: 5.87 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.77, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1-2308 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLIS01000385.1 Acinetobacter baumannii strain ABOB03 contig-6000074, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 1 29 89.7 31 ....G.......CC............... GAAAACCAATATGCTGCCTAATTGCCATAAG 61 29 86.2 31 ....A.......CC..............G ATCTGCGTCCATTTGTACTTGCTGCGGGTGC 121 29 96.6 31 ............................A TATACAGCACCGCTTAGTGCGACGCGGTCAT 181 29 96.6 31 ............................G CCCACAGGTTGAGCATCAACGGCCATCGAGA 241 29 96.6 31 ............................A TCATAGAGCTCACTTTGTCGTTGAGCCTGCA 301 29 96.6 31 ............................A GAAGGCCCGTAATTTAACTGTAAGCCGTGGT 361 29 100.0 31 ............................. CTTCCTGAGTTTTAATCCCATTTGCCTTACA 421 29 93.1 31 ......T.....................C ATCTTCGCCAATTGCTTTTGGAGAGTTGCTA 481 29 100.0 31 ............................. TCAGGGAATTATCGTGAAACTTTCATTGACT 541 29 100.0 31 ............................. GCACCAGCTGCTGGCTGGTTGAAATCTGCAA 601 29 96.6 31 ............................A GAAGGTGCAGAGTTTTGGGACTTTGGGTGGT 661 29 100.0 31 ............................. GTTTCAAAAGCTACACCATCAAAACCATTGC 721 29 100.0 31 ............................. ATTTAAGTAATAAGTTTAATAACGACCTAGT 781 29 96.6 31 ............................A ACACGTTCTCTATATCGCTGTTTGCGGTCAT 841 29 100.0 31 ............................. TCAGTTGGATATGCCTTTGATACCAAGAAAC 901 29 96.6 31 ............................G CCTGCAGACACGGATTTACGCAGCTGATCGA 961 29 96.6 31 .........................C... AACCAAACTATGTCATCGATCGGAGATTTCA 1021 29 100.0 31 ............................. TAAAATAAATGCCTGTGGTTTTTTCTTAACT 1081 29 96.6 31 ............................A GTTTCCGAAGTTGAATTACACTCGCCAAGTT 1141 29 100.0 31 ............................. AACACAGTGATTTGATTACCTTGAGCAACCC 1201 29 96.6 31 ............................A TCTTGATGCCGAGGTCTTTAGCTTCTTGAGA 1261 29 100.0 31 ............................. CATCCACCTTTGATGAAACGGATCCACGCAA 1321 29 100.0 31 ............................. CTTGTGTGACGGCCTCCACTCCAGATCCCGC 1381 29 100.0 31 ............................. TAAGCTTCAAAAATAGCCATTGATTATAAAA 1441 29 100.0 31 ............................. GACAACTTTCCACGGCAATCAGGGCTTTCCA 1501 29 100.0 31 ............................. AAAGATGCACGTGGCCTAATGCAAGTTATTC 1561 29 100.0 31 ............................. TTAAAATTAGGTGCTGAGTTACCACGGCTCA 1621 29 100.0 31 ............................. AAACCAAGAACTTGAAGATTTTGATGCTTAT 1681 29 100.0 31 ............................. AAAAATAGTGTGTTAATTATTTATGATGAAA 1741 29 96.6 31 ............................C GTATACATGCACATCAATACGATATCCCGAT 1801 29 96.6 31 ............................A TACTATTATAATGATCTAAACCCATTACAAC 1861 29 100.0 31 ............................. GCAGCTACTCGACATGTTGGTAGGGCAGATG 1921 29 96.6 31 ............................C AGTCGGCTGGTGCTAATTGAATAAAATCGTT 1981 29 96.6 31 ............................A GATTGAGGCGATTTTTATCGCGGACATTGCC 2041 29 96.6 31 ............................C AGTCCCCGCTTTGAAGCATTCCCATCAGTAC 2101 29 100.0 31 ............................. CACAGCTATCGTCTGGCTGCCGTCGCGTAGA 2161 29 96.6 31 A............................ TATTATTAAACGGGAAAAGTATATTCTTGCT 2221 29 96.6 31 ............................A TACTATTATAATGATCTAAACCCATTACAAC 2281 28 96.6 0 ............................- | ========== ====== ====== ====== ============================= =============================== ================== 39 29 97.6 31 GTTCTTCATCGCATAGATGATTTAGAAAT # Left flank : | # Right flank : | # Questionable array : NO Score: 5.81 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.67, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1-2423 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLIS01000389.1 Acinetobacter baumannii strain ABOB03 contig-62, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1 28 100.0 32 ............................ ATAGTGGAAATACACGTAAGTTATTGATTTAT 61 28 100.0 32 ............................ TGTTGTTAGGGCTATTTCTGCTTTATCCGATA 121 28 100.0 32 ............................ AACTCATACAGCGGGTCCAAGAGCCTATGGTA 181 28 100.0 32 ............................ AAGACCAGTTTTGAAGGATATTAACTTTTTAT 241 28 100.0 32 ............................ TCGTGCTTGGGTATCACATATTGATGTGACTT 301 28 100.0 32 ............................ CACTAATCTCTTTGATTTAATTAAGTTTCAAC 361 28 100.0 32 ............................ ATCCGCATCATCAAAAATCGCAAGTGGGTTTG 421 28 100.0 32 ............................ AATAACGACGGTTGCGCTGTTGCACGTTCAGC 481 28 100.0 32 ............................ TTGATGAGAAACTGTTATTGTGTATGTCTCAC 541 28 100.0 32 ............................ ACGACAGGTAAATTGGTTGCCATGTGTATTGA 601 28 100.0 32 ............................ AATTGTAGAAAGCGTATCACTTATTTGCTTAT 661 28 100.0 32 ............................ ACGGATTACCTACAGGTTTACCAGTTGCATAA 721 28 100.0 32 ............................ TCTTGAAGGTGAGCCAACAAAAATCCATTTTT 781 28 100.0 32 ............................ GTTTAAATCCATAAATGAATTTTGCGGTTTTT 841 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 901 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 961 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 1021 28 100.0 32 ............................ AATGTACTTTAATTTCCACTCGACACCAGTTC 1081 28 100.0 32 ............................ CATGACCGAAACAGCCAAAAAGGTTTTATGTA 1141 28 100.0 32 ............................ TAAAGGATAGTTAGCTGTAGGCCCTGCGGTTT 1201 28 100.0 32 ............................ TTATAGTTATGTGTGTGATATCGTTAAGCTGC 1261 28 100.0 32 ............................ TAGCACAATCCAAACCTCAATAAAAAGTAAGA 1321 28 100.0 32 ............................ GAGCCAATAAGATCGCGAAGTATGCGGAAATC 1381 28 100.0 32 ............................ ACAGAGAAAACCCCACATGTTCGAGGGACTGC 1441 28 100.0 32 ............................ ATAATTCCGCCATCCTCGGCTGAGATATGGGT 1501 28 100.0 32 ............................ TGCCGGAGCGGTCTTGTCATTGGCGAACCCGC 1561 28 100.0 32 ............................ TATGCGATTTGATAATTAAATTGCGATACTGG 1621 28 100.0 32 ............................ GAAATAAAAAACACCTGATGAAAACAGTTCAC 1681 28 100.0 32 ............................ ATAATCACGAATATCACCAGTAAACCAGTGAT 1741 28 100.0 32 ............................ TTATTGGTCCTGGTCAGTGGAATGGTGATTCT 1801 28 100.0 32 ............................ TGGGTAAAAGCCGATGGATTAATCATCTTTTG 1861 28 100.0 32 ............................ ATTAACAAGAGTGGAATTTATTGAACTATTAA 1921 28 100.0 32 ............................ TCTGGGTTCTTTTCGCGTGTATGGGATACTTG 1981 28 100.0 32 ............................ TGTAAAGTCATTCGTAATAACCGTTATACGGC 2041 28 100.0 32 ............................ AAAACCAATCAAATAACGGTTATGTGGCCACA 2101 28 100.0 32 ............................ CATAGCGACATATAGTTTTGCCCGGATCTGAT 2161 28 96.4 32 ..................A......... TGTTTCGCGTTGAGGTCCGGGTAATCGCCTAT 2221 28 78.6 27 ....C.....CTCC..........T... GTCTTGTATCCTGATTTCAAAGATTCA 2276 28 92.9 32 ....C....T.................. ATATCACGCGCCATTGCAAGTTTTCTACCGAT 2336 28 89.3 33 ...A........CC.............. TGATCTTTAAGATTAAGCATCCGTTCTGTTTTT 2397 27 85.7 0 ...TG.......C...........-... | ========== ====== ====== ====== ============================ ================================= ================== 41 28 98.6 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : | # Right flank : AGAGTTTCTTTCAAAATTTAAGACGACGTATTTTGTCGTTAAAAGGTTGTATTAAGCTGATAAAAACTTTCTCTTTTTAAAACAAAAGATTATATTTTTATGATATTTAAACTTTAACAATAAACTATGCATGTCATTTTCATCTCGGCTTGTGAAAAAAGAGCTTTAAAGAAAACTCGAGCAATTTTGGATAGCTATGCTATTCGTACAGGACATTCGTCTTGGCAAGCACCAATGACAATGGACGGCTTAAAAGAAATTCGTAGTGCATTAAAAAAAGTAGCTACCCGACAAACTGCGGTGGCCGCTTACATTAATTTTGGTGTACGCAGAATGAAGCTTGCATGGGTTGTGGGAGCAAAACATAAATTTGCACACGATGGTGCATACCCAGTTGCATCGACTAAGAAACAGCAAAAGTTACTCATGCTTGATGAGTGGGTCAAAGTAAGTAGCTTGTTGGCAGGTGCAGCAGGAGACATGCATGATATTGGTAAGGC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 3811-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLIS01000098.1 Acinetobacter baumannii strain ABOB03 contig-2000003, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 3810 28 100.0 32 ............................ TTCTTCTCTCTGATTACAAGCTCCCTGGGGCA 3750 28 100.0 32 ............................ ATAAGGACGATGCAAGTGATAGTGCTCACCGA 3690 28 100.0 32 ............................ ATGCAGATAAAACAGTAAAACTCTATGAAAGC 3630 28 100.0 32 ............................ ACTGGTTAATTTTAATAATGCGGATGGATATT 3570 28 100.0 32 ............................ TCTTAATCTCTTCAATGTTCATCTTCAACCCT 3510 28 100.0 32 ............................ AAAACGTTGAACATTAGTAAGTGTTAGAACAC 3450 28 100.0 32 ............................ TTACGATGGCCAACAGAAATATTAGACATATA 3390 28 100.0 32 ............................ GATAAAGGTTGTATGCGCTCTAAAGCGTTAGT 3330 28 100.0 32 ............................ AATCCAAACAGCAAAACCGATGATACCTGCAA 3270 28 100.0 32 ............................ AGTGGGCTTATATCTCTTCTATAAAAAACGGA 3210 28 100.0 32 ............................ AATGCTGCTGTTGACGTGGCTGGTCCAGTTGC 3150 28 100.0 32 ............................ GGAGTCAGGCACACTATTAGATAGCAGTGTGC 3090 28 100.0 32 ............................ ATGATGAACCTGTCTTACCTTCAGATCCTTCT 3030 28 100.0 32 ............................ AAGCATTTCAGTTGCACCAAGATGAATACTTT 2970 28 100.0 32 ............................ TCAAGTGCAGATGCAGCCTAATTATTCTTCTT 2910 28 100.0 32 ............................ AAGAACGTTTGGCAGCAAAAGGAACATTACCA 2850 28 100.0 32 ............................ TTATTGTGAGCACCTTGATTGCTGTGCGCTGC 2790 28 100.0 32 ............................ TACAGCGGGAAACTTGAAAGTCATTGCGAAAT 2730 28 100.0 32 ............................ TGATTGCCCCCTGAGGAAACTGTATAAAGTCC 2670 28 100.0 32 ............................ AAACACCAACTAAGCCATTCCCTATTCAAAAA 2610 28 100.0 32 ............................ ATGAACTTTTAATGGATGCATGCGCCGCCCAC 2550 28 100.0 32 ............................ ACGAACAACGATAATTTGGAATACACGCTCAT 2490 28 100.0 32 ............................ TCAGGAGAAAGATCGTTCAAAAGCTCAAAACC 2430 28 100.0 32 ............................ TGAAAGTTTTGATATCCACTCTGCTGTTTCAA 2370 28 100.0 32 ............................ AGATGGTAAGAAAATTATTGAGTCTGGAGACA 2310 28 100.0 32 ............................ CGACAGTCCAGTTGATCAGATCTTGATTAGAC 2250 28 100.0 32 ............................ AATGACATGGTTCAACAATTAAATTCATCTCA 2190 28 100.0 32 ............................ GTTCTTTTCTGCAATATGTGCCATTAGGTATT 2130 28 100.0 32 ............................ ATTTTAGATGAAACAAAAGATAGCAGGATTAT 2070 28 100.0 32 ............................ AGACCAAGCGGATTGACCGTATTGATAAATAA 2010 28 100.0 32 ............................ TTCTGCAATACAAATCACTGGATCAGCCAGGT 1950 28 100.0 32 ............................ TGAGTCTTTGATTTCCCAAATATTACTTGAAA 1890 28 100.0 34 ............................ CCTGAAAAATTTCACTGTGTCCATTTCGTTATTA 1828 28 100.0 32 ............................ TATGTCTTTAAATTCTGAAAAAACACTTGTTC 1768 28 100.0 32 ............................ GAAAAAATTGAAAACTTTTTAGAAGTAAATGA 1708 28 100.0 32 ............................ GCCACACATGCCTAAAAACGCAAGTGCGCTCG 1648 28 100.0 32 ............................ ATTATCAGATAAGCCTTTTATGAATGATCGTT 1588 28 100.0 32 ............................ ATTAGCTATTAGCTTTTTGGCAACAACAACAG 1528 28 100.0 32 ............................ AGTTCATGAAAACAGCTTTAAAAAGAAAGCAC 1468 28 100.0 32 ............................ TCCGAAGGTAGTGAAGCTGTGTGTGAATTTAC 1408 28 100.0 32 ............................ TTGCAAGCTCGTCTAGCTAAAGTAGACCCTAA 1348 28 100.0 32 ............................ TGGTACGACAACTACGAAAAGCTGAGCAAAGT 1288 28 100.0 32 ............................ TCAACTTAAATGGATGCTCCCCGCGGTGAATT 1228 28 100.0 32 ............................ TTGATTGCTAGACGGATTTTTAGGCAGATCAT 1168 28 100.0 32 ............................ GAGTTTAATGCGCTATATGGCGACGAGGATTT 1108 28 100.0 32 ............................ CATGCAATCGCGTTGATTACCGCAGCTTCGAA 1048 28 100.0 32 ............................ ATGAGCCGCAACCATACGGTCTATGACTTCCA 988 28 100.0 32 ............................ ATAGCGCCCTGCTCTATGTTGTCACTTCCGAA 928 28 100.0 32 ............................ TCCAAGTGAATCGGCTCCTAATGCAAATGACC 868 28 100.0 32 ............................ TGAAAACCAATATGCTGCCTAATTGCCATAAG 808 28 96.4 32 ....A....................... GATCTGCGTCCATTTGTACTTGCTGCGGGTGC 748 28 89.3 32 ....T.......AT.............. ATATACAGCACCGCTTAGTGCGACGCGGTCAT 688 28 89.3 32 ....T.......AT.............. GCCCACAGGTTGAGCATCAACGGCCATCGAGA 628 28 89.3 32 ....T.......AT.............. ATCATAGAGCTCACTTTGTCGTTGAGCCTGCA 568 28 89.3 32 ....T.......AT.............. AGAAGGCCCGTAATTTAACTGTAAGCCGTGGT 508 28 89.3 32 ....T.......AT.............. TCTTCCTGAGTTTTAATCCCATTTGCCTTACA 448 28 85.7 32 ....T.T.....AT.............. CATCTTCGCCAATTGCTTTTGGAGAGTTGCTA 388 28 89.3 32 ....T.......AT.............. TTCAGGGAATTATCGTGAAACTTTCATTGACT 328 28 89.3 32 ....T.......AT.............. TGCACCAGCTGCTGGCTGGTTGAAATCTGCAA 268 28 89.3 32 ....T.......AT.............. AGAAGGTGCAGAGTTTTGGGACTTTGGGTGGT 208 28 89.3 32 ....T.......AT.............. TGTTTCAAAAGCTACACCATCAAAACCATTGC 148 28 89.3 32 ....T.......AT.............. TATTTAAGTAATAAGTTTAATAACGACCTAGT 88 28 89.3 32 ....T.......AT.............. AACACGTTCTCTATATCGCTGTTTGCGGTCAT 28 28 89.3 0 ....T.......AT.............. | ========== ====== ====== ====== ============================ ================================== ================== 64 28 97.7 32 GTTCGTCATCGCCCAGATGATTTAGAAA # Left flank : ACGTTGGGCCAAAACGCTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAGTTTATTCGTGATGAAGGCAAAAACTCTCATGACTCTATTGCGGATATAGCCAACAGCTACCTTGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGGATGGGAATTAGCTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCTGATCTAGTTAAAGATGCTTTTGTAATGCCACTCGCTTTTACATGTGCAGCAAGAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACTTTTAACCCAAGTACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : A # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCCCAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCGTCATCGCCCAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //