Array 1 114967-117434 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABPVT010000007.1 Campylobacter concisus isolate 2013-42088, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 114967 30 100.0 37 .............................. ATTCTTGTGCCTTTTCAAGGTATTTTTGTTCTTGCAG 115034 30 100.0 39 .............................. GACTTTGCAAGCGACGCATGTCCTTACTGGATTATTTTT 115103 30 100.0 36 .............................. GCTTTGCTCTGATGAAGTTTGAAACGCTATCGGCTA 115169 30 100.0 38 .............................. ATAAGGTTTAAGCTATCATTTGATAACATTCTTTTGCC 115237 30 100.0 37 .............................. GGGTTGTTTTGGGTTGCTTGGGAGTGGCTCAAAGGTT 115304 30 100.0 36 .............................. GCTTTGCTCTGATGAAGTTTGAAACGCTATCGGCTA 115370 30 100.0 36 .............................. GGAAACTTAAGGCTGAGTATCCTAAAAAATACGAAG 115436 30 100.0 33 .............................. AAATAAAAGACAATATCTGTTCCTCTGTCATAA 115499 30 100.0 37 .............................. AGCCTTTTTAGCTTTTTTGCTATCTCTCTTTTTTGCA 115566 30 100.0 36 .............................. CCGAAACGCTCAAAGACCTTGAAAAAGATGGCTTAA 115632 30 100.0 38 .............................. AGCGAGCTAATCAACGCAAACGACGCAAATAATACAAT 115700 30 100.0 38 .............................. TTCAAAACCTAGTATTGACGAAGCTCAAGTAAAAACGG 115768 30 100.0 39 .............................. AAATGCAAGTAAGCACAAAAGAGCTAAGTAATGCTTTAG 115837 30 100.0 35 .............................. GGTCTGCTGTGGCTGAGTTGTTAGGCACTTCGACG 115902 30 100.0 35 .............................. TAGATGATAATACAGGGCTTATAAGACCTGAATAT 115967 30 100.0 35 .............................. GTAAGCCATAACCATACTTCCACACCCTAGCTCTC 116032 30 100.0 34 .............................. AGCGAGTGTAGCTGGCTTGATGGGCTAAGCCAAA 116096 30 100.0 35 .............................. TGTTGCAAGGCTGTGCTTCAAAAACGGCTTCTAAT 116161 30 100.0 36 .............................. ATTAGCGTTTTCATTTTTGTAGCTCCTTATATCTCT 116227 30 100.0 33 .............................. AAATCAGTAATAATATATGGCAAGTCAGCTATA 116290 30 100.0 36 .............................. AAGCCAATATATGTAAATACGCCGTCGTCATAAACA 116356 30 100.0 37 .............................. CAGACTAGGACACGAAAATGACGAATGATGAAAGAAT 116423 30 100.0 36 .............................. TTCGTCGCAGCGCTGATCGAGATTTGGCGGTGCAGC 116489 30 100.0 37 .............................. ACGAGAAAAATGTTATTCCTTTTTCTGACATACAAGC 116556 30 100.0 36 .............................. ATGCCTTTTTGTATCTTTTCATTGCCAACTTTTGGT 116622 30 100.0 35 .............................. GTTTCCCAACTGGGGATGAAGCGAGCGATAAGGCT 116687 30 100.0 37 .............................. ACTCAGTATGCCGAAAAATATTTTGGTGAGTATTTGT 116754 30 100.0 34 .............................. TCGAAGCTTGCAGGTAATTTTTTGAAAAATGAAA 116818 30 100.0 38 .............................. AGCTTCTAAGTGATGCTATTGCTAGTGCTGGCTCTGGT 116886 30 100.0 34 .............................. TCCGCAAACTCACCAACTTTGTCATACCATGTCT 116950 30 100.0 36 .............................. CTTGCCAAAAAACGTGAGATCAATAAAACACGTTTC 117016 30 100.0 35 .............................. TCAGCTGCATTGTTATTTAGTCAGTAAAGCACACC 117081 30 100.0 36 .............................. TAGTCCTATCTAATCTTGGGCTAAGACCTGCTGAGT 117147 30 100.0 33 .............................. CAACGCGCTGGCGAGATAAGTGAGCTAAACCGC 117210 30 100.0 34 .............................. GAATTTCAAGCGATAAGAAAAATGAGAAATGGAA 117274 30 100.0 36 .............................. AAATCTCTTTTGCTTTTTTAATATCATCGCTTTGGC 117340 30 100.0 35 .............................. CTTCATCCGCTGTCATTGTCTATCCTTTTTTAGGG 117405 30 93.3 0 .........................T...T | ========== ====== ====== ====== ============================== ======================================= ================== 38 30 99.8 36 ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Left flank : GAGCTAGATCCGCGCATCGGCTTTTTGCACGAGCCAAACTACCGCGCACTAAGCCTACACCTCGATCTTGCGGAGATTTTTAAGCCGATCTTGGGCGATACGCTGATTTTTAATATGCTAAATAAAAAAGAGATCACCGCAAAGGACTTCCAAACGGACGCTGGCAGGATAAAATTTAGCAACGACGCCGTGCAAAAGATCGAGCTAAAGATGATCTCGCGTCTTTGCGAGACGCTCACGGTGGGCGGTAGGGAGCTAACGTGGAGGCAGGTGATCCGCCGCGAAGCAAACAAGCTTAAAAAGTGCATCTGCGAGGACGCGCCTTATGAAGGATTTAAGTGGGAGTGAAATCGCATTTTAATAAAGCGTTTTTTAAGATTTTAAAAAGCTTGAAATTTAGGGCTTGGCGTATTTATACATGGCTAAAATTTAGTCAAATTTAAGGCGAAAAAATATAGACTTCTTGCATCAAAAGGCCTATAAATCAGCTTTTTGGTGCT # Right flank : TCTTAAAAAAAGATATCCTTAATCAAAAAGCTTAAAATTAAACTTTAAATTTAGTTTGATATATTAAATTATTAACATGAGTATTGATATTTTAAAATATTTCTAAAGAAGTTGGACCCAAATATGGGTCCGAATAAGGTAGTTATAGACCTTCAAAAGGGTTTGAAACTACGTCTTTGCGATCAATTATATAAGGTATGATGGCTGCGTGACGAGCTCTCTTGATTGCTTTTTCTACCATCTCTTGATATCTTTTTGATGTGCCAGTTAGGCGTCTTGGCATGATTTTAAATCTCTCTGACAAACAATACTTCAAAAGTGAAGTATCCTTGTAATCTATAAAATCAATTTTTGCTTCTGTAAATTTGCAATATTTGCGTGAATATTTTCTTTTTTCTGCCATTTCTTTATCCTTTAAAATTAAAACGGTATTTCGTTATCGCCTTCAAAATTGTCAGCGTCAACATTTATATCAGGGATTTTTTCTTCATAATACTCTT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTAGAATTTACTCCGTTGGAGTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.60,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //