Array 1 16195-20772 **** Predicted by CRISPRDetect 2.4 *** >NZ_RQKF01000031.1 Clostridium butyricum strain JKT37 NODE_31_length_43624_cov_138.079340, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 16195 30 100.0 34 .............................. AATAGAAGTTGATGGTTATAAAGTTGGTGGATTT 16259 30 100.0 36 .............................. TTCTTTATAGATGGATAAACAACGCTATTTCCTTCA 16325 30 100.0 36 .............................. CCTAGCTTAAACACACAGGATTATTTAATACAGTAG 16391 30 100.0 35 .............................. AGTAAATGGAGAAATCGAATTGAGTTGCAACATGG 16456 30 100.0 36 .............................. AGTACTAAAACTATAGTGCAACAAGAAGAAAATAAA 16522 30 100.0 36 .............................. TTGTAAAATATCTTTTGTTGAATCTTCACTCATATG 16588 30 100.0 36 .............................. TGCATCACTTATTCCTTGTTTAATTCCAGCAACTAT 16654 30 100.0 36 .............................. GATGATGTTATTATTGGTGGGTATGGTTCACTTTAT 16720 30 100.0 36 .............................. ACTTTTAATAAGCTATATGTTAGAGCTAATGCTTCT 16786 30 100.0 36 .............................. ATTGTTGGTGGTGATATTGTTGAATTAGATTTTATT 16852 30 100.0 36 .............................. CGAGAACACTCGTTCGCAATATTTTATAATATGTTT 16918 30 100.0 36 .............................. ATAGCTCTAGTTATACTTGGTGTAATTCTTAAAAAT 16984 30 100.0 36 .............................. AAAACCCTATAATATAAGTAAACACTCAGGTTCTTT 17050 30 100.0 39 .............................. TTTGTTAGATATCCTTTACTAGCAACATAAGCACCTGAG 17119 30 100.0 36 .............................. AGAATATATCGTTTATAGAATATTCCTGAATACATT 17185 30 100.0 35 .............................. GGATGTTGATGGATTATGGTATTACTTAGATATAG 17250 30 100.0 36 .............................. ACAGCAGATATAAAGGTTATAGCATTATTTAGCATG 17316 30 100.0 36 .............................. GTTGATATAAAAGGTAAGCTTTATAGTGATTTTAAA 17382 30 100.0 36 .............................. TAATAAGCTTTTTATCTTTAACATTAAAAGCTCCTA 17448 30 100.0 36 .............................. TGAATTCATCTATGCTTTCGTGTGAATACGCACTTA 17514 30 100.0 35 .............................. TTAAATAAAGCTAGTAAACTTATTATAGATAACAA 17579 30 100.0 36 .............................. TTGGATAAAGGTAAAGTTGGTAATGAGATACTATTG 17645 30 100.0 36 .............................. TGTTAATACTTGAATCTGTTTATCTGAAAAAGGTTG 17711 30 100.0 35 .............................. TAGAAATGGGGTATGATGGAGAAACAGAAGAAACA 17776 30 100.0 36 .............................. TTCTCTTATTACCTTTTCACCTTTTGATTCAGTCTT 17842 30 100.0 36 .............................. AGAAACAATTATGTTAAATAAAGATGAGGATTTAAA 17908 30 100.0 35 .............................. TTTTTAGAATTTGGTAATGGCTTGGTTAGTTTAAA 17973 30 100.0 36 .............................. GCTTGTAATGTTAAGCTTGCTAAATTTGCGCTTAAT 18039 30 100.0 36 .............................. GTAAACTGGTTTAATAAGGCTGGTGAGAAAGAAGAT 18105 30 100.0 36 .............................. AATTCTGATTACTGGATAAATACATTAGCATTAAGT 18171 30 100.0 36 .............................. TTATTTCTTATCCTCCAATACTTTCATAATTCCCTC 18237 30 100.0 36 .............................. TTGTTAAAAGAATATGCTTGGGATTTTGATAATGAG 18303 30 100.0 37 .............................. GTAGATAAATCATCTGTAGACTTTGTAGCATACTTTG 18370 30 100.0 35 .............................. TCAGGAACTATTAACTTATACAAGGATTTTATTAA 18435 30 100.0 36 .............................. AAGATTTCAGATGTTTGGGGCAGAAGCTATAATTGA 18501 30 100.0 36 .............................. TTAAAAGAAGTAAAAAGCATCATTAGAGATGATAAT 18567 30 100.0 36 .............................. GCACAAGTCCTATTTTCTTAAAGACTTCCATAGCAA 18633 30 100.0 38 .............................. TTAGAACAGGCAATATTTGCTATGAGTAAATTGAAATG 18701 30 100.0 36 .............................. TGAATATGGTAAATGCTTTAGCAAATAATCCTGCTC 18767 30 100.0 36 .............................. GCATTTATTATTACATTACTATTATTTAAAAATAGT 18833 30 100.0 38 .............................. AGTGATTGGAGTTTTGGAAGGAGCTGATTTAGATAGAG 18901 30 100.0 36 .............................. ATGAACAGAAAAGAGAATTAGATTCATTTGTATTAA 18967 30 100.0 36 .............................. TTAGTTCCAAACTGTCCTTTTCTTGCAACTCTCCAT 19033 30 100.0 35 .............................. TATTCATTTGCGACTCCTTTAACAATTACATCTAT 19098 30 100.0 36 .............................. GGAGGAATATTTATAAGGGACATGTTGTTAAGACCT 19164 30 100.0 36 .............................. TTTAATAATAATGTTAAAAATTTAGAATGGAATACA 19230 30 100.0 36 .............................. AAGGAAGGAAACATAGTACGAATTTACAACAAAGGT 19296 30 100.0 36 .............................. TTAGTAAAAACTTCTATCATTACTTTATTTTCAATC 19362 30 100.0 35 .............................. TTTTTTATAACTAATGAATCAAGAAGTACTCCTTC 19427 30 100.0 35 .............................. AGTAATTTAACATGAACATATCCATCTGCTGATGC 19492 30 100.0 35 .............................. ATATAAGTTAAATCTCCTTTGCATCTCCTACACCT 19557 30 100.0 37 .............................. CTCTTAGGAATTAATACAGTAGCAAGGTCTGTTAAAG 19624 30 100.0 35 .............................. GTAAGAATGAATGAATATGGTAATGGAGAAATGGC 19689 30 100.0 36 .............................. TTAAGATATAAAGCACAGTTTGGAAGAGATTATTTT 19755 30 100.0 36 .............................. TAAGCTTCTGTCCATATTCCTTCTGGAATTGTACCC 19821 30 100.0 35 .............................. ACTTATATTTTTGTTTTCTCTTGCTAACATAACTC 19886 30 100.0 36 .............................. ATAGAAAATGGAATTATAGATGTTCTAATAATCCCG 19952 30 100.0 36 .............................. TTACTATACTTATATTATAATACGTTTAATCGTAAA 20018 30 100.0 35 .............................. TCAGTTCCACTATCATACGGACAGTTTATTATAGG 20083 30 100.0 37 .............................. TATGGAAGACAAGGACAAAATGTATTCTAAAAAGCTG 20150 30 100.0 36 .............................. AAATCATAAAATGCTTATCAAGCATGTTGTTAAATT 20216 30 100.0 36 .............................. GTTGTAGATCCTAACACTGGAGCACAAAAGATCAGT 20282 30 100.0 37 .............................. TTAATAATTACACTTTTTTCATTGTTATTTAAAACAG 20349 29 96.7 36 ...........-.................. CCATCTTGTTCTATGTCATTCCAAGTATAATCAAAT 20414 30 100.0 35 .............................. ACTCGACAAGTACGATATTGCTGTGATGAATTTAA 20479 30 100.0 36 .............................. TAGTTAATATCATTATACATTATAACTTGCCCGTCA 20545 30 100.0 36 .............................. TGAATTCATCTATGCTTTCGTGTGAATACGCACTTA 20611 30 100.0 36 .............................. GATAAATTCAATCTTGTATATAACAGTGAAGAAGAT 20677 30 100.0 36 .............................. TCATTTTCATATCCATTTACACTTGATCTAGATACA 20743 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 70 30 100.0 36 GTAGAAGTAGCTCCATATTGGAATGTAAAT # Left flank : GAATATGATCCATTTAAGATTTGGTGGTAGTGGGGTGAGAGTATGTATGTGATATTAGTTTATGATATTAAAACTGATGAAGAAGGTCAAAGAGTCTTAAACAAAACATTTAAGACATGTAAAAAATATTTATCGCATATCCAAAATTCTGTATTTGAAGGTGAGTTATCAGAATCTCAAATAATTAAGTTAAAGTATACCTTAAAGGATATAATAAGAGATGATATTGATTCTGTGATTTTATTTAAGAGCAGAAATCAAAAGTGGTTGAGTAAGGAAATGTGGGGAAATAAAGAAGATAAGACAAGTAATTTTATTTGATTGTCTACCTAACATAATGTTAAAATATAGGGGGATAGACAAAATTAGATTTACACAGTATTTGCAGACAATATTTTTAAATATTGATAGAGATTTATTTATGTATTTTGTTTGAATATTATAGGTAGACTGAAAGGGCTTATAGACACTAGTGTTTTTCAATGTTTGTAAGAAACCAG # Right flank : TTAGTAAATTATAGAATAGCATCGTATATGATGTTAAATGTATATTGTATATTCAAAATAAATAAAGGGCCAACATTAAAGAAATGACTAAATTATAGTCAAGGTCTTTAATGTTGGCCCTTTTTGATCTATTATATTGTTATAAAAATAATTAAGAAAGGAAAAAGCAGCAATGCTACCCGTTGAAAAGTTCCATTACTGCTTAACATAAAATAATATTTATGATAAGAAAATGATAACTCATTTAAAGATAAAAATCAAATCTATAACACAAAAAACTTATAATGAATTTATTGAAAATATGGATATCCACGCTCTTACTTGTTCCTGCGGAATGTCCGGACAGCTCATAAAACATGCTTATTATAACAGACATATAAAAACTCCAGATGGCATAATACTGCTAAAAATTCTTAGAGTAAAATGCAAATGCTGCAATAGAACTCACGCAATATTTCCAGAATGTATTGTACCTTATTCTCAAGTTCTACTAAATGACC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGAAGTAGCTCCATATTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.40,-2.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 2 23859-26791 **** Predicted by CRISPRDetect 2.4 *** >NZ_RQKF01000031.1 Clostridium butyricum strain JKT37 NODE_31_length_43624_cov_138.079340, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 23859 30 100.0 36 .............................. CTATTAAAAATATCTGATATTTTTTCAGCAGCATTC 23925 30 100.0 36 .............................. TATAATCTCTTATATTTTCTTTGAACTCATTTAAAC 23991 30 100.0 36 .............................. AATTAGTAGTCAAGGCGATATAAGAAATAGCAATGG 24057 30 100.0 36 .............................. TATAAAATAGCCTTATCAATAGCAAGTCCTATAGCT 24123 30 100.0 37 .............................. AGTGGAAGTGGTAAAAGCACTTCAATGAGAAATTTTG 24190 30 100.0 35 .............................. ACAGCATTAAACGATTATGAACTTTCTATACACAC 24255 30 100.0 35 .............................. GGTTAAGCCAAATTGAAGTTTGCTTTATTGCTTCA 24320 30 100.0 35 .............................. AAAAGAAAGATAGCTCTTCAATAACAACATATATT 24385 30 100.0 37 .............................. CATTGAGGACAAACATAATCATTTTCTCCTTCGTGCG 24452 30 100.0 36 .............................. AATGATTATGGAAGTAGCTTAAAAGATTTGATTGGA 24518 30 100.0 35 .............................. GAAGAAGAATGGAACGGACCTGGTACTGTTAGAGT 24583 30 100.0 35 .............................. AAGAGCTCAACGTGTTAATTAAAGAGTATCATGAA 24648 30 100.0 36 .............................. GAATATATAGAAGAAGGTGCAAGTTGCTATGACAAG 24714 30 100.0 37 .............................. GTCAGATTTAACTTTGGATTCAGAAGGTATTGGATAT 24781 30 100.0 36 .............................. GTAAACCTCTAATTTCTATTGGCATATCCAAAACCT 24847 30 100.0 35 .............................. CAATAATTCATTGCATTACCTGTTTCAATCATTTT 24912 30 100.0 36 .............................. GATATTAATACACTTATAAAAATAGCTGATATTTTC 24978 30 100.0 36 .............................. TAGTAAAAGCAGAAAGAAAAAATACTTGTAATTTAG 25044 30 100.0 35 .............................. CAACTTGAACAGTATAAAGGTCAGTTGTATCATTT 25109 30 100.0 36 .............................. TATAAATAGTTTGTTAGGCCCTATTGCAATTTCATT 25175 30 100.0 35 .............................. TTGTAATACATTCTATAGGCGTTTTAGGCTCAATA 25240 30 100.0 35 .............................. CAAAAGCATTAGCTAGATTTAAATTGTTAACATTA 25305 30 100.0 36 .............................. AGTATAATGGTTGGAGTTCCTAAGATGAAATATAAA 25371 30 100.0 37 .............................. CAATAAGCTAATATACCAAGTAACGAAGGTAAATATT 25438 30 100.0 35 .............................. TTTATTTGTTGCTTAAATAATTTAAATCTTACTGT 25503 30 100.0 35 .............................. TTATTAGACCAAATTAAAGGTTCTGATGCATTTAA 25568 30 100.0 36 .............................. TTGGAATTACTATTCTTCCTAAGCTATCGACTTTTC 25634 30 100.0 38 .............................. TTGTTTCGAGGTGGACCATATGCAGGATATGAAAGTGG 25702 30 100.0 37 .............................. GGTATATTGACCTCTTCCACCTTTATACACCTCATTT 25769 30 100.0 35 .............................. ATAGGAAATCTTACATCTCAAATGTTTGCTAATAT 25834 30 100.0 36 .............................. GAAGAATTTGACAAGACACATGGTTCAGGAAAACTT 25900 30 100.0 37 .............................. GTAGTATTAAGACCATCAACTTTTGATGTAGCTGTTA 25967 30 100.0 36 .............................. ATAGACTATGTATATCCAGAACTATGCGAAAGAATT 26033 30 100.0 36 .............................. TTAAGAAATGCAGATAATAGGATAAGTTCAAATTTT 26099 30 100.0 35 .............................. CAAGGAACAAAAGTAAGGCATGTCGTTGATTTCTC 26164 30 100.0 36 .............................. GATAATGCTATTGGAGCACATTGCCAGGGATCTAAT 26230 30 100.0 37 .............................. TTAAGTCTAAAAGATATATCTGAATATTTTAAAGTTT 26297 30 100.0 36 .............................. TAATAACCCCCTAATTTTATGTTTTCCGAATAAGTC 26363 30 100.0 36 .............................. AGTATAATCAAACTCATCAATTAAATCCCATTTAGT 26429 30 100.0 36 .............................. TAATCAATCATAGATACACCTTCTACCCCATAGCTA 26495 30 100.0 39 .............................. ACAGAACGTCCTATCTTAGATATATCAGTTATTATTTGT 26564 30 100.0 36 .............................. TTGTCTATTATATTAAAATTATTTACCAATGCTTTT 26630 30 100.0 36 .............................. ATTATTACAAATTGTAAACATAAATAATAAAAAAAG 26696 30 96.7 36 ........................T..... ATATGAGGTGGGTAAAACATTTAAACATAATGGAAA 26762 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 45 30 99.9 36 GTAGAAGTAGCTCCATATTGGAATGTAAAT # Left flank : CTAATGAACCATTAAGGCAACGTGTGACAATGAATTATAATATAGATAATCTTAGTAAGTCTGAGTCAAAAGAATATATAATTTCTAAACTTAACGGTGCCAAATGTACTAGTAACGTTTTTGATGAAACAGCATTTGAAGCAATTGCTAACGCGTCGAATGGAATTCCTAGAATTATTAATAAAATTTGTAATTCCAGCCTCATAATAGGTAATACCAAAAATGAAAATACAATTAATAGTGATATAATAATGCTTGCTGTTAATGAAACTGAACTTGGATAAAAATAAAATCTACAGATATCAATGTTGGTATTTGTAGATTTTATTTACATATTTTTCAAATGCATTCCTTCATAAACCGTGCCGATGTAACATCATTTACATTAAATACTTTGAAGTATATCCTTATTTTTAGCATTAAATAAAGTTATGATATTAACATCAAATAATGTGCTATTCAATAGTAAATGTTATACAAAGTATGGATTAAAAAGAACA # Right flank : TTGTATCTCTGGATCATATTGGCTTTTGGCATTCCTAGAATTATTAATAAAATTTTTAATTCCAGCCTCATAATAGGTAATACCAAAAATGAAAATACAATTAATAGTGATATAATAATGCTTGCTGTTAATGAAACTGAACTTGGATAAAAATAAAATCTACAGATATCAATGTTGGTATCTGTAGATTTTATTTACGTATTTTTCAAAGACACTCCTTCATAAACCTTACCGATGTAACATCATTTACATTAAATATTTCATCACGCTCACGTAGTTTCTATTAATGGACATTGTTATAGATTAAAAGATCATTTTAATTTTGAGGAGAACTAAACTCTTAAATGATCAAAAACTTACAGCATTAACTTGACATTTATATGGAGGTAAAGGAAATGGATATAATAATGGAAGATTAACAGTAACATCAGATGTATTTAGATGAGATGGCAGAAAAAGGATTTTAATAGAAAATTAACGACGATCAGGAACTAGATTGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGAAGTAGCTCCATATTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.40,-2.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //