Array 1 1610148-1609760 **** Predicted by CRISPRDetect 2.4 *** >NZ_NRGZ01000001.1 Pseudoalteromonas sp. JB197 SAMN07141177.101, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1610147 28 100.0 32 ............................ AGGCGTGCGTGATAGTGAAGGGCAATAGCAAT 1610087 28 89.3 32 ..........TA.T.............. TAACCTTTGCCAAGCTGAACAACTCCAATCTA 1610027 28 100.0 32 ............................ ATTGAGGGGAAGAGATTAGATATGCGCTCAGT 1609967 28 100.0 32 ............................ GTTAGAGACTGTTACACTATTTCCTGCCCCAT 1609907 28 100.0 32 ............................ GTTATTGAATCAAACCCACTTAAAACAGGTGT 1609847 28 100.0 32 ............................ ATGTAAATGACTCCTTAGTTTGATATATCAAA 1609787 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 7 28 98.5 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GTACCCACGGGGCTGAACCGCTTTAACAAGTCATAGCTTGGCATGTAATAACGTGTTCCCCGTACCCACGGGGCTGAACCGCTGCAAACGCTGCAAGATTAAGATCATCTATTGGTGTTCCCCGTACCCACGGGGCTGAACCGTCCATGCAACGATTCATCCATCGCGTCCAATTCGTGTTCCCCGTACCCACGGGGCTGAAGGGTGGACGATTATGACGCAGGATGAAGCTAAGTCGTGTTCCCCGTACCCACGGGGCTGAACCGCGGTTTACCGCCAGCTAAAAACAAGTTGTTAAGGTGTTCCCCGTACCCACGGGGCTGAACCGTGTTTTGGACGGTTTTGTTGGTGGCATAATTGGTGTTCCCCGTACCCACGGGGCTGAACCGTGTATATATATCATCACCACGAATTACACTAAGTGTTCCCCGTACCCACGGGGCTGAACCGCATATGCATGCTTAGAAAGACAATATCTTGTTGGTAAAACTCAACTACCG # Right flank : GCTCTCAAATATTTCGGCAAACGTTTGCGATAGTTCAAGGTTTGAGGAGCAAGGTTTATATTCAATGGAAAAAGTAAGTACAGGATGGCTTGCTCACTCGGCGTTTAGAAAATAAGCCGAAGGGATAGAAGAATACAGGAGCCGTATACGAGGCCCGTACGTACGGTTCTGTGAGAGGGATGAGGCAAAAGCCTCACCCTACTCGATGTGCCTGTAATAAAGTTTAGCCTGTTAGCTTATCGCTTGTGCGACTCGATTATTTTTATGCCGATGTTTTAACGTATACATGCTCGGCTAAGGTTAAACTGGTTGGGTAAGTGGGAGTCGTTTTGCTGCTGGGCAATTATTATTTAGGGCATACCCATAGAAATGGCTGAGGGACGTTTGAAGTTTAATGTACTAGCATAAAGCAGAGCTTAATGGCTATGTAGCCATCAAGCTCTACTAACAGCTTGTTATTCAACCGTGGCTGTTAAACCACGACGTTTAAGTAAGGCTGA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.24 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 1612060-1610198 **** Predicted by CRISPRDetect 2.4 *** >NZ_NRGZ01000001.1 Pseudoalteromonas sp. JB197 SAMN07141177.101, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1612059 29 100.0 32 ............................. GTACATCTAGATATCTTCAGATGTGATTTATT 1611998 29 100.0 32 ............................. GTGAGGAGATTTACGGTCTCACCCTTATCTGT 1611937 29 100.0 32 ............................. TGGGACCAGATGTACCTGCATTGCTGATAGTG 1611876 29 100.0 32 ............................. CCCATCAAAACGATGGGCTTTTTATTGCATTA 1611815 29 100.0 32 ............................. ACTCTGTAACTGGTGTTATGATTCCTACTTAC 1611754 29 100.0 32 ............................. TGCTTTGATTGTGAAACCAAGTGACTTCATAC 1611693 29 100.0 32 ............................. GCTGCTGGTGCCGGTTATTGGAATAAAATTAG 1611632 29 100.0 32 ............................. GGAGCTTCAGGCTCTAGGCGGCTCTTTTGATA 1611571 29 100.0 32 ............................. TATGTTTTAGGTGAAATAACATGCCGTGAGGA 1611510 29 100.0 32 ............................. CTGCATGAGTGCTATAGCCAAGTCGTACAAAG 1611449 29 100.0 32 ............................. CAGCGAGACAAGCTTGACGTGCTAGAAACCGA 1611388 29 100.0 32 ............................. CCACCCTAAATGTTTAGCGTATATGCTTAAGC 1611327 29 100.0 32 ............................. CTATAAAAAAATGGAAGTGGACGGTGAGCAAA 1611266 29 100.0 32 ............................. CCTATTTTTTCGCCGCTCTCGGTAAATGCTGG 1611205 29 100.0 32 ............................. ATGATCTAAATATGCTTGGATTACCTCATACC 1611144 29 100.0 32 ............................. TTAACCGCCAATGCGAAAGCAGAGGTGATAGG 1611083 29 100.0 32 ............................. CCTTGCCTTGCTTGCAGTTGCTGCAGTCTCTG 1611022 29 100.0 32 ............................. TTTTTTTATTGATATTTTTTTGCTTTTCAACA 1610961 29 100.0 32 ............................. ACTCACACCGGTGCGCTCTATTGCATCATTAA 1610900 29 100.0 32 ............................. CGTTAAAAAATCACGGGTAAAAGGTTAACGTA 1610839 29 100.0 32 ............................. CGATAATGACTAACCATGAAAAGGCTTTGGAT 1610778 29 100.0 32 ............................. TTATGAGTAAATTAAATGATGTTTTTAACGGT 1610717 29 100.0 32 ............................. ATCAAAACACTCGCAGTGTAGAGCAAATGACA 1610656 29 100.0 32 ............................. CTTTAACAAGTCATAGCTTGGCATGTAATAAC 1610595 29 100.0 33 ............................. CTGCAAACGCTGCAAGATTAAGATCATCTATTG 1610533 29 100.0 33 ............................. TCCATGCAACGATTCATCCATCGCGTCCAATTC 1610471 29 93.1 32 ..........................GG. TGGACGATTATGACGCAGGATGAAGCTAAGTC 1610410 29 100.0 33 ............................. CGGTTTACCGCCAGCTAAAAACAAGTTGTTAAG 1610348 29 100.0 32 ............................. TGTTTTGGACGGTTTTGTTGGTGGCATAATTG 1610287 29 100.0 32 ............................. TGTATATATATCATCACCACGAATTACACTAA 1610226 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 31 29 99.8 32 GTGTTCCCCGTACCCACGGGGCTGAACCG # Left flank : ACTAAATGCAGGAGAGATCACTCCACCTAAGCCTTATGATGATGTGCAGCCGCCGGCATTACCAGAGCCAGAATCTATTGGTGATTCAGGTCACCGTTCAAGTTAGGAATAGATTATGAGCATGTGTGTTGTAGTAACCGAAGCCGTACCGCCAAGATTAAGAGGGCGGTTAGCTGTTTGGCTATTAGAAATTCGAGCTGGTGTTTATGTCGGCGATGTTGGCAGAAAAATACGAGAGATGATTTGGCATCAAGTCCAAGAGTTAGCAGAGCAAGGAAATGTTGTAATGGCGTGGAGTACAAATACGGAATCGGGTTTTGACTTTATTACTTATGGTAAAAATGCACGAATGCCAATTGATTTAGAAGGTTTAAGATTAGTTAAGTTCACTCCAATTACGCAAGAAATACCGACTGATAAATAACTGTTTTGCTCTTTAAAAATCTGGTAGATTTTACTTAGCTATTTTTATTTAATTAAAACAAGCATATACTCTTAGA # Right flank : CATATGCATGCTTAGAAAGACAATATCTTGTTGGTAAAACTCAACTACCGGTTCACTGCCGCACAGGCAGCTTAGAAAAGGCGTGCGTGATAGTGAAGGGCAATAGCAATGTTCACTGCCTAATAGGCAGCTTAGAAATAACCTTTGCCAAGCTGAACAACTCCAATCTAGTTCACTGCCGCACAGGCAGCTTAGAAAATTGAGGGGAAGAGATTAGATATGCGCTCAGTGTTCACTGCCGCACAGGCAGCTTAGAAAGTTAGAGACTGTTACACTATTTCCTGCCCCATGTTCACTGCCGCACAGGCAGCTTAGAAAGTTATTGAATCAAACCCACTTAAAACAGGTGTGTTCACTGCCGCACAGGCAGCTTAGAAAATGTAAATGACTCCTTAGTTTGATATATCAAAGTTCACTGCCGCACAGGCAGCTTAGAAAGCTCTCAAATATTTCGGCAAACGTTTGCGATAGTTCAAGGTTTGAGGAGCAAGGTTTATATT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGTACCCACGGGGCTGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGTGCCCACGGGGATGAACCG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.30,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 1773361-1773153 **** Predicted by CRISPRDetect 2.4 *** >NZ_NRGZ01000001.1 Pseudoalteromonas sp. JB197 SAMN07141177.101, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 1773360 29 100.0 31 ............................. TCATAGCGACCTGAACGCCTTATGTTATACA 1773300 29 100.0 31 ............................. TGAGTACGTAAAAGAGCTGACTGCTCGACTT 1773240 29 100.0 31 ............................. ATAAAAAACGATACATAGCGCTAATATATAT 1773180 28 89.7 0 T.......................-..G. | ========== ====== ====== ====== ============================= =============================== ================== 4 29 97.4 31 AGTGAACTGCCGAGTAGGCAGCTGGAAAT # Left flank : ATTTTGAGATGATGACTCATGATAAGTTATTTGGCTTATCAAAAATACTCGAAGTACCAGTAAACCAAAGCGAAGTCATGTTTGTTCGCAACCAATCAGTAGCCAAAGCATTTGTTGGTGAAAAGCAAAGACGATTGAAACGCGCTAAAAAGCGAGCTGAAGCTAGAGGGGAGGTTTACAACCCTGAATATAAATTTGAGGCAAAGGACATAGGCCATTTTCATTCAATACCTGTATCAAGCAAAGGCAACGGGGAAAGTTTTATACTTCATATACAAAAAATTGAAAATACTAATGCGGTAGGAAATCAATTTAATAATTATGGCTTTGCTACAAATCAAACATTCCAAGGCACGGTTCCCTCTTTGAATACCCTTTTTTAATAGTTTTAAAACACTCTTTTAATTTTCAATGAGTTATCTGATTGATTGAAAATAAGGGTAAATAATTTAAATTCATTTAACAGTTTGGTATTTGTAGAAATTTAAACTATTTTTAAT # Right flank : TAGGCCGGGAAGTGAATAACCACAAATTGTGACTTTTTACTGCCGAAAAGGCAGAGGTTAAATAGAAAGTCCCCAGCAAACGCTGGGGTCTTTTTAAGCGTTATAACCGTATTTAAGGCTATTAACAACGTTCTTAATTAGCCTTCTTCCTGCAATAGTATTTACAAACATCAAAGGTGCTTTAGAGCTAAATTGTAAGGAGTACGTATTTAGCCATTTATTCCATCGTTCAATATTTTCAAAGTAATCAATACAAGCTGATGCTAGATGAGCTAACTCAAAGGTATTTTCACTCAAAGTTGCATTTAAGCGTGTGTACTCTTTTTTATGACGTTTCAAAGTTCTAATATTTGTACCAATTGCTTTAGCAAAGGATTGAATATCCCAACCTAACTGAAGCCTAAACTTCTCAACACTCTTTATATCTAAACCACGCTGAATTAATTCAATTTCATCTAAAGGGTTTGAGCTTAAATTAACTTTTCCATTGCTGAGTATAT # Questionable array : NO Score: 2.73 # Score Detail : 1:0, 2:0, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTGAACTGCCGAGTAGGCAGCTGGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.10,-8.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA //