Array 1 133020-141850 **** Predicted by CRISPRDetect 2.4 *** >NZ_VUNH01000010.1 Pyramidobacter porci strain SM-530-WT-4B seq10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 133020 29 100.0 32 ............................. GCAGTGAGGCGGAATTGACTGTTGTTTTCTTC 133081 29 100.0 32 ............................. GCGCTGAACATTGTGAAGCCGCGTCTCTCCGA 133142 29 100.0 32 ............................. CGGGCCGAGATGTGGTGGAGGATGAGGGAATG 133203 29 100.0 32 ............................. AGGTTAGCTTTGATCTGTGAGTTGATCGCTGT 133264 29 100.0 33 ............................. CACAGTGTAATGTTGTCAATAGTTTGCGTGTTG 133326 29 100.0 33 ............................. GAAGCCGCTTGCTGCCGCTGTCCGGCCGCGTCC 133388 29 100.0 32 ............................. CTACAGCAGATAGTGGTGGAGACGTCACAGAA 133449 29 100.0 34 ............................. AACGACCGTCAATATCGTTAAAGGCAAATGCCTC 133512 29 100.0 33 ............................. GAAATGACGGCGCGCGAGGTTATCGAGCGGCAC 133574 29 100.0 32 ............................. AGTGGTGGGGCGGTCTGTGGGTGAAGATCAAA 133635 29 100.0 32 ............................. TTCAGCGCCGTGACGACGCCCTGGCTGTTCAG 133696 29 100.0 33 ............................. CACACAATCAGCGCATCTTTTACAGTCATGGGG 133758 29 100.0 33 ............................. TATTCATCTCGCAGCTCAGTCCACGAGACCCAC 133820 29 100.0 33 ............................. CGGAGATAGCCGTCAAGGTCCTTCTTGGCGATC 133882 29 100.0 32 ............................. TGAATTGGGAAACATAATCTTGCCCAGATCGG 133943 29 100.0 33 ............................. CGAGCCGGGCTAGAGATGCAGGCGCAGCAATAC 134005 29 100.0 32 ............................. AGGATTTAGCTGCGTTCGACCGCGAGGAAACC 134066 29 100.0 34 ............................. AGTGGAACGGCGAAACCGATGAAAAACAGAGGTG 134129 29 100.0 32 ............................. CTATGTGCCCGGCCCCGCTTTTTTCCGCTTTG 134190 29 100.0 33 ............................. ATCCTCATGGGAGAATCCCGCCTTACCTCCTGC 134252 29 100.0 32 ............................. AGAGGGCATACGGTGATACGCCTTAATCATCA 134313 29 100.0 33 ............................. CTCAAGCCAGCATATAAGGTAAAGGATAAATCA 134375 29 100.0 33 ............................. GATAATACGCAAACTATCGGCGCTATTACGTTG 134437 29 100.0 33 ............................. CCAGTGCGTTAGACTCGCGTTGGATTTGCGATA 134499 29 100.0 34 ............................. ATTACAATCGTCGCGCAGAACTTCCGCGACCACC 134562 29 100.0 33 ............................. CGTAATGGCGTTAATACTTTGCGTATTATCGTA 134624 29 100.0 31 ............................. CTAACTTACTAAGGGCCTCAGACAGTGCCGC 134684 29 100.0 32 ............................. TCCGTGATATCCACCGTGAGCACGGGTTCTTC 134745 29 100.0 32 ............................. CCCCTGTTCACCCTGCGGGCCTTGGATACCTC 134806 29 100.0 32 ............................. CGACGCCGCGCCGCCTCCTCTGACGTTCGAGC 134867 29 100.0 33 ............................. GGTGCCGTGTCGTCGAAGACCCAGTGGGGTATC 134929 29 100.0 33 ............................. TACTTGAGGCCGACGCCGCAGCGCAGGAAGAGC 134991 29 100.0 33 ............................. CCCGCGCCAGTTGTTGTGACGTCTAGTGGAGAA 135053 29 100.0 32 ............................. GTGACAGTCACAGCGATCAACTCGCAAATCAA 135114 29 100.0 32 ............................. TCACGACCGTAGCGCTCGAATATGCGGGTGCT 135175 29 100.0 33 ............................. GCTGACGAGAGGCCCGAAGCCTACGATGAGACG 135237 29 96.6 32 ............................T TCATGCCGCCTTTGTAGATCTTGTCGCTGCCG 135298 29 100.0 32 ............................. TGAGGTGATCAGGAGGGGCTCTATCCCCTCCT 135359 29 100.0 34 ............................. AATTGATACTAGCAGCACTCGCACCGGCGAGATC 135422 29 100.0 32 ............................. ACGTCGACTCCAAATCTGCTTGTCCGGAAAAT 135483 29 96.6 33 ............................T ATCTCGCGTTGATGAGACTTTCTATGCTCTTCC 135545 29 100.0 33 ............................. CGTTTTCCTGATGATAGGATTCGTTATTATCAT 135607 29 100.0 32 ............................. GTGATGGTCCTGATAGCGATAATTTGTTTAAG 135668 29 100.0 34 ............................. GCCCAAGTCGCCGACGAGTTTTACACATACAGCC 135731 29 100.0 32 ............................. ATCACCGTCTTGCCGCTGCCCGTCGGCAGGGA 135792 29 100.0 33 ............................. ACGCGCTGCCAGCCGTAACGTGTTAAAACCATA 135854 29 100.0 33 ............................. TAGAACGGGCAGTAAGTGTAGTGCGCCATTATT 135916 29 100.0 33 ............................. AATCCGGCGACGTCTCTGCAGTGGGCTGGAGAG 135978 29 100.0 33 ............................. ATCGACAGACAAACCGGAAAGAGTAGTAGTATT 136040 29 96.6 34 ............................A GAGACATGATTATTTCACATCGTGTCTGCCGTGG 136103 29 100.0 33 ............................. GCAAGCTGACGGAAATCTCGATGGACGGGCTGA 136165 29 100.0 32 ............................. AGACGGTCAGCTTCCAGATCTTGAGCGACATC 136226 29 100.0 32 ............................. CGGACGTCGTCGCTTACGAAATCCGCGAAGGA 136287 29 100.0 31 ............................. GTCGGGCAGTTTTTGCGCGGCAAAATGCCGC 136347 29 100.0 33 ............................. TTTATAGGCACCGCCGAGGCGGCGGCGATCCTC 136409 29 100.0 33 ............................. AATCATCGCCCCCGACGGATGGGTTTAAATGCC 136471 29 100.0 33 ............................. CCGCGATCATGACGCCGACGTATGCCAGCGCCC 136533 29 100.0 33 ............................. GTTCTTTGCGCTCGATGCGGTTATGGACAGACC 136595 29 100.0 33 ............................. GTCAACCCGTGGATCCGCGACCATCTCGACGCC 136657 29 100.0 34 ............................. TGCTCGTGGCCGACGTAGGGGATGCATTGTGCCC 136720 29 100.0 33 ............................. GACGGCTGGCTGCGTCTCAATGTCGGCCGAAAG 136782 29 100.0 32 ............................. GGACGGCCTATCTGCTCGACCTGCTCAGCACC 136843 29 100.0 31 ............................. CAGGCCGCTCCGGCGTAGGGGCAGGCGTTGC 136903 29 100.0 33 ............................. ATTCTCGAATTTTTCAGCAAGATGCCATATATC 136965 29 100.0 33 ............................. TAACCTCGCCTATAGTACTAAAACCATAGGGCC 137027 29 100.0 32 ............................. TGTGCTAGGCCGATGCCGGTGTATAGCGTCCC 137088 29 100.0 32 ............................. CCTGGCTGTTTTTCTGCGCAGGCGTAGAGCAC 137149 29 100.0 32 ............................. CCATTTGCCGTTCCGCAGATGCCTGAGCTGCC 137210 29 100.0 32 ............................. TGAGGTAGCCAAAACAGGATTCAAACCAGCCT 137271 29 100.0 32 ............................. AATGGCGATGTCCACGTTCGGATCCGGATGAC 137332 29 96.6 33 ............................C AAGGGGCCGATGAAGAAGATAAAAGCGGATCTG 137394 29 100.0 33 ............................. CATAACGCGAAAGTCGGCGGCAGCCCGCGGAGC 137456 29 100.0 33 ............................. CACTCGTCCCCAGCGATGCTCAACCGTGAACGC 137518 29 100.0 32 ............................. TAGATGTCGTGGTTCGCGCCGGAGCGCTTGAA 137579 29 100.0 33 ............................. TCGCATTCGTCGATGCGTTGACCGTCTTTGCCC 137641 29 100.0 33 ............................. AGCGACCGCGTGCGGAACGTCGAGGCGGTGTGC 137703 29 100.0 33 ............................. AGCGACCGCGTGCGGAACGTCGAGGCGGTGTGC 137765 29 100.0 32 ............................. ACGGAGGCCTTCTCTGCCGGCCATGCGCAAGC 137826 29 100.0 32 ............................. AGAAATGTGGCTTATCGAGGACAACGAAGAGA 137887 29 100.0 32 ............................. AGACCAGGGACAAATAGCTTTCGAATTCGGCC 137948 29 100.0 32 ............................. AGGACGAGGCCGCCGGCGGGCGCCGCGGCGCG 138009 29 100.0 32 ............................. GCTATCGCTGACCTTGTAGAGGATAAACTCAA 138070 29 100.0 33 ............................. AAAATCTGACGCTCGTGAAAAAAATGATTCCCC 138132 29 100.0 31 ............................. CGGAGCGCCGGCGCGACGGATCTCGACGGCC 138192 29 100.0 33 ............................. CGCGGGCTGTCGTCGCCGGATTTGGCGGACGCG 138254 29 100.0 33 ............................. GACGGCTGGCTGCGTCTCAATGTCGGCCGAAAG 138316 29 100.0 33 ............................. CGGCGATGAGGATAAGGACGGCAAAATCGAGGA 138378 29 100.0 32 ............................. CTGCAGCAAATTGCGGTCGAGACGTCGCAGAG 138439 29 100.0 32 ............................. GCAAAAGTCACCACCACAGCGCACGAATATGA 138500 29 96.6 32 ............................T ATCCGGCGAACGCGGTTATCGGCTTGCGGGAC 138561 29 100.0 33 ............................. CATTGGCAAAGCTGTCCATTTCTTTGACGCCCC 138623 29 100.0 33 ............................. CATACGATCCTTTGGAATTATAGGAGGAAACGC 138685 29 100.0 33 ............................. TACTCGAGGACGACGCCGCTTCACGGGAAGAGC 138747 29 100.0 33 ............................. TCGAAGCGGAATGGATTATTTATAAACTCCAGC 138809 29 100.0 33 ............................. CCAGCTTTCCGGAGATCATCCACTTGCCACTGA 138871 29 100.0 32 ............................. CAAGTTGGCCTTGATCTGTGAGTTGATTGAGG 138932 29 100.0 31 ............................. CAGGTATGGTCCAGGCGCTTGGGTAATATGC 138992 29 100.0 33 ............................. AGCATGGCCGTCGGGTTCTCGCTGCCCGGTTCG 139054 29 100.0 33 ............................. CCATACACGGCACGGCCATACTGTTGCTCAGCG 139116 29 100.0 32 ............................. CAGGTTGGCTTTGATCTGCGAATTAATTGAGG 139177 29 100.0 32 ............................. AAACTCCCGGCGCGAGATGCGCCATTGTGGAG 139238 29 100.0 33 ............................. GCTGACGATGGGCCTAAAACCGACGATGAGACA 139300 29 100.0 33 ............................. CAGGTCGAGCAGCACATCTCTGTATCCGTCGTC 139362 29 100.0 32 ............................. CGCTACAACTTGTGGCGCTAGTGGGACGATAT 139423 29 100.0 32 ............................. TTGCTCGAACGGGTAGTGCTCAACAACCTCTT 139484 29 100.0 33 ............................. GCCGTAGTGTCAAAGCGCTTGCTTGTGATTGTC 139546 29 100.0 33 ............................. TTCATTTTTACCCCTCCCTCCCTATACGTAAAG 139608 29 96.6 32 ............................A ATTGATCGACATCCGCTATCCGAACGCGATGG 139669 29 100.0 33 ............................. TGCACGACTTACTTGTTTGGCAACGGCGCGATC 139731 29 100.0 33 ............................. ACTGGAAAGATTGTCAGCGATATGGTCGAGGAG 139793 29 100.0 33 ............................. CATGAAATATCTGATCGTCTGGGGACTGTTCGC 139855 29 100.0 32 ............................. CTCTTTGATCTCGCCAGTTTCTTTGATTCTGA 139916 29 100.0 33 ............................. GACTCTCGACGAGGAGTTGTGATGTGTTGGATC 139978 29 100.0 32 ............................. TCATCCGCAGGAAAAACACCAACATAACAATC 140039 29 100.0 34 ............................. CGCGTCTCGAGCACGGGGACCTGGTCGATATCCC 140102 29 100.0 32 ............................. TTTGAGAATCTTCCCACCTTGTCGGCGGAATT 140163 29 100.0 33 ............................. AGCGTTGGGCTGAGTATCGTTATTATCCGTCCC 140225 29 100.0 34 ............................. TCTGCGAGGCGCTGAGGATCAGCCGGCCGACAGC 140288 29 100.0 32 ............................. CAATTACGCTCGTGAAGCGACGCCTCATGAAC 140349 29 100.0 34 ............................. CGAACGGACGAGCCGTCGGGCTCTTTTTCGGGGC 140412 29 100.0 32 ............................. CCTTCGCCCCGCACGCACTTTTCCGCCAGGAA 140473 29 100.0 33 ............................. GACTCTCGACGAGGAGTTGTGATGTGTTGGATC 140535 29 100.0 32 ............................. TCATCCGCAGGAAAAACACCAACATAACAATC 140596 29 100.0 33 ............................. GTCGTGCGGCGGATGCACGAGCTCGATATGACA 140658 29 100.0 32 ............................. TTTGAGAATCTTCCCACCTTGTCGGCGGAATT 140719 29 100.0 34 ............................. ATTTTTACAAAGGTCGGCAGCCGGAGTATACTAC 140782 29 100.0 33 ............................. TCTTTTTTGTTTGCTTTGGTAAAGGAGCCCGAG 140844 29 100.0 31 ............................. GTGACGCGGGCGGCAGAAGATCATGAAAGCG 140904 29 100.0 33 ............................. TTCTACGACCTGCGCAAACAGGCGACGGTGGCG 140966 29 100.0 33 ............................. CAATGTCTGCGCGCCACCTACGCTCCGGCGCGG 141028 29 100.0 31 ............................. AGGATGTTTCAGCAGAACCCGATCAGACCTC 141088 29 100.0 32 ............................. CGCGCGCCGTCGCGATGGGGCTGGCGGTCGCC 141149 29 100.0 32 ............................. CGACCTGATGAAAACCGTCGCCGCCGAGACTG 141210 29 100.0 33 ............................. AACATCAAAATGATCGGAATCGCACTGGATCCC 141272 29 100.0 33 ............................. CAGCCGGCCGCACCTGCGCAGCCGCCGGCGAAG 141334 29 100.0 33 ............................. TTCGCCGGAAGCGAAAAAACTCAGCCTGGCGTT 141396 29 100.0 33 ............................. ACGGCGCCGTACAGAGGGCACTGCAGTGCCAGA 141458 29 100.0 32 ............................. AGGTACTCTAGTATGGCTGACCCCAAAGTCAC 141519 29 100.0 32 ............................. GCGTCAGGGCGGCTTATAACTTCGCGCAGTAC 141580 29 100.0 33 ............................. GGCGGCTCCGACGACAGCGCGCAGTGCGAGCCC 141642 29 100.0 33 ............................. ACGCTGAATCTCGAGAGGAGCTCTTCGCACAAC 141704 29 100.0 32 ............................. CCAGTCCGTACCGCCAGATTGGAGCACGCCCC 141765 29 96.6 26 ............................C ACGGCGTTCTGGGCGGTGTCGGAGTT Deletion [141820] 141820 29 75.9 0 GG.......C......C..A.A......C | CA [141830] ========== ====== ====== ====== ============================= ================================== ================== 144 29 99.7 33 ATTTACCCCACGCACGTGGGGTTGAACCG # Left flank : CGCTCCCGCTCGACAGACAGGTTCGCATTGCCTGCCGCAGTTATTTCAGCACAGCTCAAGTCCTCAAGCGTCTTCCCATCGATATCGACTGGATATTTCAGGTCGAATGTCCTTCCGAAGAAACCATCGCCGCCAATATCGGCGACCTCTGGAATGGTTCGGAAGATGAAATTGTCGTCGGCGGCAAAAATTATGCGGGGATTTTACAATGACTCTCATTACGATGGAAAACGTTCCTGAAAGTCTGCGCGGGGAATGCACCCGTTTTCTACTTGAAGTCAAAGCCGGCGTTTTTCTTGGAACCGTCAGCGCCGCCGTACGTAATCTTCTTTGGGAAAAAGTGAAAGAAAACGCTAGAAGCGGCGCTGCTATTCTCGCTTATTCCTATCCTAATGAGCAGGGGTTCGTTCTGGAAATGCATGGCGATCCCAGACGTAAAGTTGTAGACATAGACGGTCTTAGTTTGATACAAACTCGACAATAACCGGCTTTGTCGAAGT # Right flank : CATCCCTGCGTTGTGTAACTCGTATTCCCCCTGCTGGGTACAAGCTTGCCAATGATGACGGTAAACTGAATGTTGCACCGGAATTTATCATATCAGGGGCATTCACGGTTCTCGGCAAGGTGGTTGGGTTCGTAGTAAAAAAATAATCTAAGGAGGCATTGTAATGCCAGATAATCGCGCACTCAAATGGTCAAAGCGATTTTTCATTTTCGCGTTGTGTCTCTGTGGTAGTCTCGTCGCTCTAGTTCAGATTGCGACAAAGAATGTAAAATTCGACGTCAGTGTAGTCACAGAAAATAACATGCCTGCCGTCTCCATAAAAACGAACCTCCCCGAAGGGCTTGAAATATCAATTTCTTTGGCGAAAGGGAATGCGGAAAACGGCGAAGCTGGCACAATCGTTGTGAATGCATAACGGGCAACAGTTAAAAGCGGTAGCATTTCATATGCGCCTTTCACTCATAACGGGAAGCCCTTCCCCGGCGGCGCGTATGTCGCAT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTACCCCACGCACGTGGGGTTGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.80,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA //