Array 1 16145-15256 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAHPXI010000014.1 Bacteroides thetaiotaomicron strain DFI.3.60B CJDDAHIF_14, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                                	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	===============================================	==============================	==================
     16144	    45	  87.2	    30	...A.-...CA....T..-............................	CTTGCCGAAGTCGGAGATACCGTCCAAGCA	A [16135]
     16068	    47	  97.9	    30	.........................G.....................	TATAAAATTCAGCGTGCCAAACAGCACGAT	
     15991	    47	 100.0	    30	...............................................	ATGACCGATGCACTGGAGAAGGTTTGCAGC	
     15914	    47	 100.0	    29	...............................................	ATATAACTTCAAAAATCTAATTTACTTAC 	
     15838	    47	 100.0	    30	...............................................	TGTTACATCCGCTATTATCAGTAATATATA	
     15761	    47	 100.0	    30	...............................................	TTCAATTTACTGATACTACTAATCTCACTA	
     15684	    47	 100.0	    29	...............................................	AAAATAGTAATAGGACTTCTAAAAGAAAT 	
     15608	    47	 100.0	    30	...............................................	TTTTAACTAAAGAATATAATGCAGCAATTA	
     15531	    47	 100.0	    29	...............................................	AAAATATTATTTTTCTATTTATTTGTCTC 	
     15455	    47	 100.0	    30	...............................................	AAATCATATAAATATAATAAAATATATTAA	
     15378	    47	 100.0	    29	...............................................	CTCATTCTAACTACTCTTATTCATAAATA 	
     15302	    47	 100.0	     0	...............................................	|                             	
==========	======	======	======	===============================================	==============================	==================
        12	    47	  98.8	    30	GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAAC	                              	       

# Left flank :   GTTCACAAGTTACATAGGTGGGGATTCCATAGTTGGCGATCTCCTGCATAGCAGCCGCACGTTCTTGAGGTACCAGAGTATTCCGCATTATATCCGGATAAAAACGGTTCGTCTCAATGGTCGTACAAAGAACGGATTTCTTCATAACCGGATGCTCCAGATATTTCAGAAAACGGGCGGGATTCTTTGACTGGAAGAGATACTTGTTATCAAAACCGTCACAATAGTCCAGTATCTGCTCAATCCATTCTGACGGGACATTAGCCGCCCATTCATCCGTACTGCTGCCTACAAAGATAAAGTTGCCTTCACCCAGATTCACTTTCAGTTCCTTCAGCTCCAGACGCAAGGGAGGCAGGAGAAGTTTACGTCTCATAAAACAATATGAACAAGAGTGTTCACATTCGCCTTTCATCGGGTTATATGTATGTGAAACGAAGGCATACATGTTCCCGGTACTTTTATTCAGTGCCATATATCATTATGCTTTTCACATCCAT
# Right flank :  ATATTTTATATAACAAAATGATTTCCAACAAGTTAAAAAGAAAATTAGAAAAGAAAAAAAGTCTGTTTCCAGCACAAAATCTCGCATTAATGCGAGATTTTGTTTTTTAAAATAACTCTAATTGTTGTCCAGGCGTATTAACATTCTGCATTTTCTTTCCATAAAAAAGTTCTATATTACCAAACTGTTTATCGGTAATACACATGATTCCGACATGTCCAAACTCCGGGAGGAAAGATTTAACTCTTTTTATATGTACTGTAGCATTTTCACTACTAGCACAGTGACGCACATAAATGGAAAATTGAAACATAGTAAAACCATCCTTTTGCAGATTCTTTCTAAAGTCCGCATAAGCCTTCTTTTCTTTCTTCGTCTCAGTCGGCAAATCAAAAAAAACAAGTACCCACATAATACGATATTCACTAAAGCGATCCATTATCGTTCAGGATAAGCTATTCGACGAATTTCTCCATTGAAACATTTGTAAAGTGAGGAAG

# Questionable array : NO	 Score: 6.20
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:68.09%AT]
# 	Reference repeat match prediction:         R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-3.40,-2.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-8] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [85.0-63.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [1.05,4.5   Confidence: MEDIUM] 

# Array family : II-C [Matched known repeat from this family],   
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