Array 1 102294-103834 **** Predicted by CRISPRDetect 2.4 *** >NZ_LMMV01000003.1 Pseudorhodoferax sp. Leaf267 contig_11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 102294 37 100.0 34 ..................................... AATGAGCAGGCGGCCGCGGCGCGCAACAGTGGAG 102365 37 100.0 33 ..................................... TAGGCTGCCGGTCCCATCACCCGCTGCTCTCGT 102435 37 100.0 35 ..................................... AATGAGGCCAGCGAAGCGCACGCACGGCTGGTTGC 102507 37 97.3 35 ........T............................ GGTCTTCGACCGTCTCGTCGGGCACAGCCTCGCCC 102579 37 100.0 37 ..................................... GGACCACGTGGGGAAAGAGGCCTACACCCTGTTCTTG 102653 37 100.0 33 ..................................... TTGGCGTTGAGCGCGAACCCAAGTATTTCGACA 102723 37 100.0 34 ..................................... GCCATTGCGCTGCTTGTCGCAGATCAGGAATGCA 102794 36 94.6 36 ..................A...........-...... CTGGATGCGAACACGGCTCATGGCTTGTCTCCTTGG 102866 37 100.0 35 ..................................... CGCATAGCCGGCACCGGCCACGACCTTGGCAGCAA 102938 37 100.0 33 ..................................... CATGCACATCGATAGCCGGCGAGCGTTATTACG 103008 37 100.0 35 ..................................... ATCTTCGAAGCCGAAACGCACCTCGATGCTCTTGT 103080 37 100.0 36 ..................................... TTTCCGCAGGCCAAGGCGCTCAACTACTCGATCGAC 103153 37 100.0 35 ..................................... CACCAAATCGTGGGCTTGTCGCGGCCCGCGCTGTC 103225 37 100.0 36 ..................................... AAGTCCAAGATGGGCGAGAAGTGGGACTACCTGGCC 103298 37 100.0 34 ..................................... AAGCAGTGGGGCGAGCACAGCCTGCATGAGGTGC 103369 37 97.3 34 ..........C.......................... AAGGTCGGCGACGCAGTCCGCTTCCTGCAGGACA 103440 37 100.0 34 ..................................... GCACGACGCCCGCTATCTCGCCGTCCTTGGCGGT 103511 37 100.0 35 ..................................... TAGCTACATGGTCCGGTCTGGGCCATGTGACGAGC 103583 37 100.0 36 ..................................... GCTACAACTACTCGCTCCATGGGCGGCAGGAAACTT 103656 37 100.0 34 ..................................... CACGAGACCGGCGTGCCTGTTCGTATGGGCGAGA 103727 37 94.6 34 ..................A....A............. AGAGCCGCTGCGCCGTCTAGGGCAAGCACTGGCA 103798 37 89.2 0 ........G.....T.......C.............G | ========== ====== ====== ====== ===================================== ===================================== ================== 22 37 98.8 35 GCGTCGCCCGTCAGCGATGACGGGCGTGGATTGAAAC # Left flank : GCCGCATGCTGATCATCGTGTGCTACGACGTGAGCACGGAGACCAAGGCCGGCCGCCGCCGGTTGCGCCGCGTGGCCAAGGTGTGCGAGAGCACCGGTCAGCGCGTGCAGAAGTCCGTATTTGAATGCCAGGTGACGCTTGCCGAATTCGAGGAGCTTGAGCGGCGCTTGCTGGCCGAGGTGAATCTGGAGGAAGACTGCCTGCGTCTCTACCGCCTGCCAGATTCACGTGGCGCGGAAGTGCGCGAGTACGGCCGCTTCAAGGCGGTCGACTTCGAAGGGCCGCTGGTGCTTTGACGCCTGGCCTCGCAGCTAACATTGCTGCGCGAACCCCAAGTGACGGCTCGTTCGCCAGAGAGGTTCGCGCTTCCCGCAAGCTGTTGTTTCCCTATGGTTTTTCTGTGTCACATGTGGCGCGGGCGCTTTGTACTTGCAGCGGTGCAGAGGGTTCGCGCGAAATGGCCGGATTCTGCTGGCAGGGGAATGACTTGCGCGCGAGGA # Right flank : GCGACAGGAGCACGTCGAGTCCGATCTGCGCGTGCGTCAGCGCACATCTCGGCTACCACTTCCTCTCTGAAGAAGTGAATCTTTACCGTCCCGCGGGTGAGCCGCAGGCGTGGGCCGGTGCCAGCCAAAAAGTGCTGCAGACCCACTGGCGGCTCATGGCGCCGCAGGGTACGCCACTACAGGAGGGGGTGGAGCTTCCGATGGTGAACTGGTTTGCTGGGCTAACGAGTACCGCCGACCGGATCGCTTCCAACCCAGACTGGTTCGCGCCAGGTGAGCGACATGACCATCTGCGGTCCCACTACACAGACGCACTGCGTCTGGCAGGCGGGCTCTAGCATCACATTAGTTGGAGCCGAGCGCACACCTTGCCGGCATCTCCAGCCGATACCGATGCGCAGAGCCGCCAGCCACGGGCGGCCCCCGGTGGTGGTGTCAGGCCTCGTTGAGCAGTGCCTTGATCGCCTGCGCCTCCTCGGCCGCATCGCGGGTGCTCCACA # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGTCGCCCGTCAGCGATGACGGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GCATCGCCCGTCAGTAATGGCGGGCGTGGATTGAAAC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-16.10,-14.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.15,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //