Array 1 1974098-1973912 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP036023.1 Bacillus mycoides strain BPN52/2 chromosome, complete genome		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                           	Insertion/Deletion
==========	======	======	======	====================================	==========================================	==================
   1974097	    36	 100.0	    42	....................................	AATGGACGTTTGTTACGAAATGCACTCGTGTGCGCGTTCAAA	
   1974019	    36	  72.2	    36	.A..G..G............GT.....G.AGA...G	AATGCGTTTTAGTTACAAAACGTACTCGCAGAAAAC      	
   1973947	    36	  77.8	     0	.......G..............C.TA.GCT..G...	|                                         	
==========	======	======	======	====================================	==========================================	==================
         3	    36	  83.3	    40	ATTGTACTTTCGTTACAAAATGTACTCATGTTAAAA	                                          	       

# Left flank :   GTCATACTTCTTTTTTCCATAAGTTAATTTTGCTGGCACTGGACTATCTGACCAAATGTCCTTTTTCAATTCCACTAAGTACATTGGATGAACAAAAAAATCATATGAAGGCAGCATGTTTTCTCATCCCTTCTCAGTTCTCTTCATTCAATGTATGCGCCTTGTCTTGTCCATACATCCGCTATCATCTATTTATATAAAATTACACTCTTGTCCTGTTCAGAAAGAAGTCGAATCTCATATCATGTTAAGGAAAAAGAATACCTTTTCAATTTAACACTCGATAAGGAGGATTTCTATGAAACGTGATATTAGAAAAGCTGTTGAAGAAATCAAAAGTGCTGGTATGGAGGATTTCTTACACCAAGATCCAAGTACTTTTGAGTGCGATGATGATAAATTCTCTCATCATAAATGTACAACAGGGTGTAAATGTACAACAGGGCGTAAATGTACAACAGGGCGTAAATGTCCAAGAACAAGATGTACTCGCGTAAAAC
# Right flank :  AGAAATTTTTCTGGACAAAACGAAGTTTCTGTAAAAAATGCGAATTCTTCCCTCACGGACACGGTAGCTCTTGCGATGATGATTGTGATCATGGTAAAGACTGTCACGATGACGGGCACAAATGGAATGATTGCAGAGACGGACATAAGTTCCCATCTTGCAAAAACAAGAAATTCGATCACTTCTGGTATAAAAAACGTAATTGCTAGTTTTTTATATCCACCAAAAAAGGTCGCTTTGCGACCTTTTTTACGTTTACTGAAAATGACTTATATCTGCAAATTGTTTTACTTTACCACGGTTTTCATCAAATTCAATCACACTAAGACTCGCGCTATGCATAAATGGCTCTTCCCATACATGTTCAATTTCAAAACCTGCAAAATGCCCTACGAGTAATTTCGCTGCTGCAGCATGAGTAACTATTAAAATATTTTCTCCTTTATGCTTTTCCAAAAGAAAGTGTATCCCTTCAATTACTCTTTTATGAACGGCCGCAA

# Questionable array : NO	 Score: 3.33
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.16, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     ATTGTACTTTCGTTACAAAATGTACTCATGTTAAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:66.67%AT]
# 	Reference repeat match prediction:         R [matched GCTATACGTTCCTTACAAAATCGGCTAAAATTAAAT with 94% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [68.3-56.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.68,4.5   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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