Array 1 199167-198605 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAGSZ010000002.1 Acinetobacter baumannii strain SP2128 2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 199166 28 71.4 26 T.A..C....AAC......G..G..... TTAATAGTTATTATTAATTTTTATGT G [199152] 199111 28 82.1 32 A.CTA.......T............... ATAATCTTATAGGTGTCACGGCCATTAGGTTT 199051 28 82.1 32 ...GC.....AT.C.............. TAGCCCTTCGGCTTGATGATTATTGAGTCTTT 198991 28 96.4 32 ...................G........ TATCGTGTATTTGATTCTAAAAAGAAAGTGAA 198931 28 92.9 32 ............CC.............. AAACTCACGAATAAACTGTTCTGGTTTCATTG 198871 28 100.0 32 ............................ ATTCGATAGACTGATTCTATAAGCTTATTTGC 198811 28 96.4 32 ...G........................ TTTCACCGAATGGCGATGGATTCAAGCCACAG 198751 28 89.3 32 ...G....C..T................ ACATTCAAAGAGGCTCATCGAATCCAATCGAA 198691 28 78.6 32 T..TA.......TC..T........... TTATCTTGAACCAGTGAAGCCGCGTTTTTACT 198631 27 82.1 0 ...TC.......T.........C.-... | ========== ====== ====== ====== ============================ ================================ ================== 10 28 87.1 31 GTTATTCATCGCATAGATGATTTAGAAA # Left flank : CATGCATTACAGCAGTAATAACATCCGTTGATTCGAGCATTAGGCCATCTTCTTCTTGCTGCTAAAACTGCGCTAAAGCAATTCAAATGCTCACCTAAATCTACTCTGTTTTGAGGATATGGCATGAATGAGCAACCTGTTGTTAGGTTGTGAACTTCATAATCGCCATTTGCTTGAACATTTTGATTGATAATGAATTTAGACATAGATTTTATTCCTCACAAATCATAATGATTGAAAGTAGACCTACGCTTTGCTGTATAGCAGTATGAGACAAAAGTTTAAAATGTTGTGCTATCATTTGGATAGTCCTTCTTTAAGTTATAGAGCTTTGGAAACGGACAAAAGCAGATATGAAGTTTTCGACGGCTAAGTATCTGCTTTTTTATGTTCATTTAGTATTCAAAATATATAGTTTTAATATGTAAGTCAAATAAAATATATATATAACTATTAAGGGATATACTTTACTGATTTCAATTAAGAGTTATACTAAATGC # Right flank : TTTAAGACGACGTATTTTGTCGTTAAAAGGTTGTATTAAGCTGATAAAAACTTTCTCTTTTTAAAACAAAAGATTATATTTTTATGATATTTAAACTTTAACAATAAATTATGCATGTCATTCTCATCTCGGCTTGTGAAAAAAGAGCTTTAAAGAAAACTCGAGCGATTTTGGATAGCTATGCTATTCGTACAGGATATTCGTCTTGGCAAGCACCAATGACAATGGACGGCTTAAAAGAAATTCGTAGTGCATTAAAAAAAGTAGCCACCCGACAAACTGCGGTGGCCGCTTACATTAATTTTGGTGTGCGAAGAATGAAGCTTGCATGGGTTGTAGGAGCAAAACATAAATTTGCCCATGACGGTGCATATCCAGTTGCATCGACCAAGAAACAGCAAAAGTTATTGATGCTAGATGAATGGGTCAAAGCAAGTAGCTTGTTGGCGGGTGCAGCAGGGGACATGCATGATATTGGTAAGGCATCCCAACATTTTCAG # Questionable array : NO Score: 3.30 # Score Detail : 1:0, 2:3, 3:0, 4:0.35, 5:-1.5, 6:0.25, 7:-0.02, 8:1, 9:0.22, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.57%AT] # Reference repeat match prediction: R [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [8-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.5 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 204667-204814 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAGSZ010000002.1 Acinetobacter baumannii strain SP2128 2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 204667 28 100.0 32 ............................ ACATCAGCCCGCTGTGTAAATCAAAGGATGTT 204727 28 100.0 32 ............................ TCAACCTGAACACAGACATACATGTTCTGTTG 204787 28 85.7 0 ...GC...................AT.. | ========== ====== ====== ====== ============================ ================================ ================== 3 28 95.2 32 GTTCTTCATCGCATAGATGATTTAGAAA # Left flank : ACGTTGGGCTAAAACGTTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAATTTATTCGTGATGAAGGAAAAAACTCTCACGATACTATTGCGGATATAGCCAACAGCTACCTCGATCATGGAAATTATATTGCCTACGGCTATGCGGCAGTTGCTTTAAATGGGATGGGAATTAGCTTTGCTTTACCTATTTTACACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCGGACCTAGTTAAAGATGCTTTTGTAATGCCAATCGCTTTTACATGTGCAGCAAAAGGATTAAATCAAAAAGAATTTCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATATATTTAATCTAAGTACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : ATTTGAATCTTAAAAAGAGAAAACCCCAAAACTTTCGTTTCAGGGCTTTTCACGAATCTTGGTGGAGATGGCGGGAGTTGAACCCGCGTCCGCCAGCACTACGCTCGAGAATACTACATGCTTAGATATCGTCTATTGTTTTAACACCAAGTGACCCGACGAACAGGGTACAAGGTGCGATCCTCTAAGTTTGGTATAAAGCCCCGAGGCTTGACTCTATACGGACTTGTGTGCGTGCGCTTCAGTCGGGTTCCCAGACCACAAGTATTCTAGGAAGCGGACAAGCGGCCCTTAGGCAGCTAGAGCGTAAGTTTCGTCGTTTGCGACTATTTAAATGCAAATTTTATTTACGAGAGAAAATGCGCTCTCGGCATGCATCTATGAGTTTCATCACCGGCGTCGAAGCCAATAACATCCCCATGAATGTCTGCACATCATAGCATAACTAAAATAAAATGCTGTGCATTTTATCAACAGTCTGCCACTGATGAACATACTTA # Questionable array : NO Score: 5.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.57%AT] # Reference repeat match prediction: F [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //