Array 1 21222-20312 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHHYZ010000003.1 Brevibacillus parabrevis strain 179-C7.2 HS NODE_3_length_753277_cov_236.505532, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================ ================== 21221 36 86.1 44 ......T..CAA.....C.................. TGCTCAACTGCTGTACATCCACTCACACGGCATTCGGCAGCAGG 21141 36 91.7 37 .......T.C.A........................ GATTCGAACTCATTTACCTCATCTTCTATTCCGCTAA 21068 36 97.2 35 .......T............................ GGAACTCGTTCAGTTTGTTCTTTGTACCTTTCTCG 20997 36 97.2 37 .........C.......................... CGAACCATCCGGTAAGTATCAAACAGTTGTAAGCTAT 20924 36 94.4 36 .........C.......C.................. GAAAGAACGTAGAGGTGTATTAGAAAGTGAATTGCG 20852 36 100.0 35 .................................... TTCATCTGTTGAACTGTTCGAATGATGTCATCCCG 20781 36 100.0 37 .................................... TCGAAGAAGAAGAAAAGAAAGGAGCCCGCCACCATGC 20708 36 100.0 39 .................................... ATGTGAAAAATCAAATGTACCATGTTGGAGAAGAAGGTG 20633 36 100.0 36 .................................... GAAAGCATTTATGTAACTTAATATCTGCAATTCCTT 20561 36 100.0 35 .................................... AGTTCGCATTTTCTTTTTATCCTCTTTAGGATCAT 20490 36 100.0 35 .................................... ATAAATTAAGGTGAGAGAGTAGAAGTTGACTCCTT 20419 36 100.0 36 .................................... GTGCGCCACTATTAGAGCCTGACAACAATAAGTCAG 20347 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================================ ================== 13 36 97.4 37 GTGCTAACCTCGAAGCTTTCCACTAAGCTTTCGAAC # Left flank : AAGATCGTAGAAGATCCTGCAAGATAAAAATGGCTTTACCCGAAATCTCATAGTAAAATATGGGCAAGTACATTAGACACGGCTCTCAAGGGTGGTCGGCTCATCTCCCATGTCGGAAGCGAGGGGAGGTGGGAACGTGGCAATTACTCACGAAATGCTTACACTTATGCTCCAGTTCGGCGGCTTTATCGTTGGGCTGTTGAGTCTCGTTGTAACAATCGTTGTTGCCCTGACCAAAAGAAATGACCGCCCTTGAGATTGGCGTCCAAGGCGGTCATTCTGATCGACTATTAAGCTGAGCCGTCCCCTTGAGGGAACGTCTATTGTACTACCGGCAGAGTGCGGGAACACCCTGTCGGTTTTTATTTTGTCCACTTTTGGTTAAACATTAAACACTTCATGTTGAAAGTGTAACCGATCTTGCTTCCATCATAACACGTTTGACATGTCGGCGTAAATAAATAAGCGACCCCACATGTCTTTATAATCTCCTGGTTCAC # Right flank : TCCTGTCTTACCAATCCCTACAACCGCAAGCGTTCCCACACTCTCTTTCGAGCAGCCCATTTTCTCGGTTGTATTCTGCCTGATTTCACGGAGACTCCAGTCGTTCAAACTGACTTGGCGCTTACTCTCCCAACGTATGCGAGCATCCCCGGAGCTTTTTGGGCTGAGAGGATGCTCGCATCGTTGTTTTCGAAAGCTTAGTGGAAAGTCGAGATTATCCGTGGGAGTAGACTTGTGGAGGGTCTACATTTGCACACGCACGGAAATCGGCCTGTCGCCTTTAGCATGCGACCGATACATTCATTTTACATATTTTCCAAATACAGTTCAACTACTACCGCACTGGTAAACTCCTAGCATCAGCCATTTTCTCGCATCGGGGAAAAGCGCGGTCAAAATTTTGATCCCATCTTCCCTGCATCCTTCCGCCAAACCGCCGCATCCCCTTTTCCACTAAGAGGTATTGTACACCATTAGCGTGTCCTTACTTCGCCAAAGCA # Questionable array : NO Score: 3.13 # Score Detail : 1:0, 2:0, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTAACCTCGAAGCTTTCCACTAAGCTTTCGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.70,-6.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA // Array 2 22149-23257 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHHYZ010000003.1 Brevibacillus parabrevis strain 179-C7.2 HS NODE_3_length_753277_cov_236.505532, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================================================================= ================== 22149 36 100.0 36 .................................... CAAATAAGCGATAACGCGACCAAGGGTATGTGAAGA 22221 36 100.0 41 .................................... CCGTACAGATCTTTGCAGACTCGCCCGGAACGATGATGGTG 22298 36 100.0 37 .................................... CATAACGATAATGGCGATACAATTCCACACCAGCTTG 22371 36 100.0 39 .................................... GCGTCGGACGTAGCACTTCCGTTTGCCCATTTCTTTCCC 22446 36 100.0 36 .................................... TCTGCATTTGTTAATTCTATTCTGTGCTCGATCTTG 22518 36 100.0 37 .................................... TATGGAAAAACGAAATAGGGTGATTGCGTGTTTCAAG 22591 36 100.0 36 .................................... AAAACATCATTCAGCACACTACACAGAAGTAGCCCG 22663 36 100.0 36 .................................... AGGATACCGGGCGTTTCGGTGACACTCTTGCTCGCG 22735 36 100.0 40 .................................... AACCCTCAAACTTTCGTGTACTGCTTCCTCTGCCTTTTTC 22811 36 100.0 37 .................................... TCGTTCATCCTCTCTCGTTTGAAACGTGTTTTTCATT 22884 36 100.0 36 .................................... TCCGCAAATACAAAAGAAGGTCGGTAAACAACGTCG 22956 36 100.0 34 .................................... TTGTAGAATAAACACTCACCTCGATCTGGTGTGT 23026 36 100.0 34 .................................... TGGTCGAAGGTCGACGATCCGGCTAACAAACGAC 23096 36 88.9 89 ...........C...A.........A..A....... CACGGGGATGGATGAAGCCAGCACCAAACGGCCAGTCCATTCGAAAATTTTGAAACAAGCACGTGCATATCTAAATACATCTTGCGGCT 23221 36 69.4 0 C......TC.CC...A....A....AC.....T..G | C [23251] ========== ====== ====== ====== ==================================== ========================================================================================= ================== 15 36 97.2 41 GTTCGAAAGCTTAGTGGAAAGCTTCGAGGTTAGCAC # Left flank : ATGTACTTGCCCATATTTTACTATGAGATTTCGGGTAAAGCCATTTTTATCTTGCAGGATCTTCTACGATCTTCCATGATCTTGTAAAATCACGATCCAATCTGTTTCAGACGATTATTTTTCTAACAAACTCCAGGGGTTCATATGGGGGGCGTGACATCATCATAGTTGAACTGTATTTGGAAAATATGTAAAATGAATGTATCGGTCGCATGCTAAAGGCAACAGACCGATTTCCGTGCGTGTGCAAATGTAGACCCTCCACAAGTCTACTCCCACGGATAATCTCGACTTTCCACTAAGCTTTCGAAAACAACGATGCGAGCATCCTCTCAGCCCAAAAAGCTCCGGGGATGCTCGCATACGTTGGGAGAGTAAGCGCAAAGCCAGTTTGGACGACCGGAGTCTCCGTGAAATCAGGCAGAATACAACCGAGAAAATGGGCTGCTCGAAAGAGAGTGCGGGAACGCTTGCGGTTGTAGGGATTGGTAAGACAGGAG # Right flank : GAACAAAAGCCAATTCATCTAGAAACAGTGGAATTGGCTTTTTCCTATTACCCCAAAATATGAAAATGATTTACAATAAATAAAAATCATGCCCAACTCTTTTCAAAATCAAACCGGGAGGCACCAGCCATGGCAATCCGCAGTATAAAACTAAAGCTCAAAACCCGCACAGGCCCGGAAGCCCAAAACCTCCGAAAAGGAATATGGCGAACGCATCGGCTGTTAAACGAAGGCGTCGCTTATTATATGAAAATGCTCTTGCTCTTTCGTCAGGAGAGCACTGGCGGACAGACAAAAAAAGAACTGCAAGAAGAGCTGGTTCGTCATATTCGCGAACAGCAACAAAAAAATCGTGCAGATAAAAATACACAAGCGCTCCCATTGGACAAGGCGCTCGAAGCTCTGCGGCAACTATATGAACTGCTTGTTCCCTCCTCGATTGGGCAAAGTGGCGACGCCCAGATCATTAGCCGAAAATTCCTCAGCCCGCTAGTCGATCC # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGAAAGCTTAGTGGAAAGCTTCGAGGTTAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.70,-6.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 3 29810-29053 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHHYZ010000003.1 Brevibacillus parabrevis strain 179-C7.2 HS NODE_3_length_753277_cov_236.505532, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 29809 36 86.1 35 .....G...TT........T...A............ GCAAAACGGTGAAGCTCAAAAGCTGCGGTAATTGA 29738 36 94.4 37 ...T...C............................ GGGGCTTGCTTTAAAAGCGTGCAAATGACACTCCAGC 29665 36 100.0 37 .................................... AACTCCAGTCGGTGATTACCTATTAACGGGTTTGTTA 29592 36 100.0 36 .................................... CATAATTACCGCAACGCTTTCTGGGTCTTCAATCAA 29520 36 100.0 36 .................................... CGGTCTGGATGGGTGATGGTTGTTTGTCGGTCAGTT 29448 36 100.0 35 .................................... ACAGTAACTCCAGTTGACACAGCTTTTGTTGTTTT 29377 36 100.0 38 .................................... ACGCTTTGCAATCATGGTGGCAGTCATGCGGATGCCTT 29303 36 100.0 34 .................................... TACACTCGTCACGGGTATGATTCCGTCGTTGGTG 29233 36 100.0 37 .................................... TTCCTGTATACCTCAGTAGGGAAGCGCGTTTCTCCCT 29160 36 100.0 36 .................................... ATAAACGAAAAGAAACATTTATCGGCCATTAATGAT 29088 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ====================================== ================== 11 36 98.2 36 GTGCTAATCCCGAAGCTTTCCACTAAGCTTTCGAAC # Left flank : GCCTTTACCGGACGAACAATCCATGGCGAGTTGGGTCTGCCAATGAACGAAAATGTAAAACGCGACATCGACCCGAAAGTAGGCTGGCTGCAAATTTCCAGTGAAGTCATTGGAAAATACGCCAGCGATTATATTTTCATGGCTGTCGATGCCAAAGCCGAGTCATTTGATTACGCGAATGATCCAATCTGGAACACCTTGGATGCCGTCAAACAAAACCATCTGTACGAAATTGACGGTTACCGCTTCTATTTCTCTGATCCGATTTCTGTGATGGGGCAACTAGAGGATATTGCCGATATGATGGAGGAGAGGGAAAGGGCTAGTGTTAAGCGGGGATAGTGTGGTTTTGCAGGTTTCGGAGTTTTGCCGTAGGCTTGAAGAACAGAAAGATGCCCCTAACGTTGAAGTAGGGGCATTGTTTGTTATGCGGGGATTGAATTTTTTACTGAGTTTTCGACAGGCAAAAACAAGTATAACGTCAATGGAACAGTGACGTT # Right flank : TCCTTCCTTGCCGAAACCTACAACAACAAGGCTTGAGCAGGGCTTTTTCGAGCGCCAGGAATTTCAGTATCCCTTTCCCCGTCTATGCACTCATTTCCAATGCACAATCGTTCAAAAAAGCCTACTCTCACAAGGATTTCGAGCATCTCCAGTGATTTTTGAGCTGCGGGGATGCTCGAAAATCAAACGCACATACTCAGTGGAACTTCGTGACTATTCGTGGTAGCCGCCCTGTAATGGAGGACGACAATGCACACGCACGAAATTAAAGCAAATCGACATATGGCCTCTAACCGTCGACTATCATCATTGTACTGTTTTCGCCTTGCCTCAACAACACACATCCACTTTCCTAGTAGATAAATTTAGTTAAGTCTCGCGGGAGGAACTCTCTTCCGACCGTGGCAATTCGCTTATCCAATTGGTCCTTGGTCACCGGGCCGATTTTTACAAACATGACCTGATCTTCTGCATGATGAATCAGCTCAGCCAGACTGACC # Questionable array : NO Score: 3.17 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTAATCCCGAAGCTTTCCACTAAGCTTTCGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.70,-6.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA // Array 1 441447-442818 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHHYZ010000005.1 Brevibacillus parabrevis strain 179-C7.2 HS NODE_5_length_588969_cov_243.194714, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 441447 37 100.0 37 ..................................... CAGAATTGCAGGTTATCAAAATCGATGTTGATTGCTT 441521 37 100.0 38 ..................................... TTATCTAGGTAGCTTGTGGTACTACCTGGGAGAACAGC 441596 37 100.0 37 ..................................... TGGACGGCTCTGATCCGACTGTTCGATATACTGGGCC 441670 37 100.0 38 ..................................... CCCTGTATTTGCCGATAATCACGCGTTCCGTTGCCGTT 441745 37 100.0 36 ..................................... GACTATCGAATTGTGTTTGCCCCTCATCCCACACGC 441818 37 100.0 38 ..................................... CCCGTCGCTGCACAGCCTGCTCCCTCTCGATGCTGGTC 441893 37 100.0 37 ..................................... ATTGCTGCAGGCCATCTAAATCGGTCCAGCCAATCGG 441967 37 100.0 37 ..................................... TGGGTGAACTGCGAAAGCAAAAATGCGTAGGTGTGGC 442041 37 100.0 38 ..................................... ATGGAATCAGGCTTTATTTCGGAAGGGTTGTCTCAAGC 442116 37 100.0 36 ..................................... GGATCATGGCGATGGCACTCGATGAGAACCGGAACC 442189 37 100.0 38 ..................................... TAGTTTGTATGAAGAAGATGTTGGCAAGCCATACATCC 442264 37 97.3 37 .......................C............. AGGGTAAGTCAACCAGGACTCGTTTCCCCTGCTCGCG 442338 37 97.3 37 .......................C............. CGCACATGGATCCGAAAAGCCGGCCACAGCCCCGCGA 442412 37 97.3 39 .......................C............. AGGACACCAGTTTGGCTGTTTTTTTGTACTCCTCCCAAA 442488 37 97.3 35 .......................C............. CGGCGGGCAATAAAAATAGCCCCGGTCGGCTCGGG 442560 37 97.3 37 .......................C............. GCTGCGCAATGCCAATGTTGTCGTAACGGATTTTTGG 442634 37 97.3 38 .......................C............. CGTCTGCAAACTCATCTGTGTTGAGAAAGACATCCAGG 442709 37 94.6 37 .........A........A.................. GTGTGTGATCTCCACAAGACACCCGTTTACTTCTGCA 442783 36 81.1 0 .........A........A...-C.A..A.......A | ========== ====== ====== ====== ===================================== ======================================= ================== 19 37 97.9 37 GTTACATTGGAGACCCGAGAAGTTAGGGGACTGAAAC # Left flank : AGCTGGAGAAACTCGTAGGGAACGCGAGTGCAACTGAGCGAGGGACTTGCTGCACATGAGCCGTTTTCAGTATGGACGGTTGTGTGCAGTTTTTTTGTGGGATTGTAGCGGAATGGAATGAAGTGGTCTGTTCACGCAGGGGGGATTTGTACGGGAGCGGACTTGCCGTATTAAAGGAGAGTGATTTGTTTGGGGAGTTGGATGAAGGAAGTGGCGGTTGAAAGATATTTGCGTTTGTGGATGAAAAGTTGTTTGGGTGCTGGATCGTGTAAAGAAATGGATAGATGGGATGGGGGATAATGTTTTATTATAAGTATGAGGGCGAATGGTTACCCTGTAGCGAGGAAAAAGAAATGAACAAGATGCGTACAGCCGATTTTCGAGGATAGGGCGTGATTTTTGACGAGAAGTGAATCCTCGAAAAAAGAGCGGGTTCTTGTTGGCAGTGAGTATGAGGAAAGCCTTGGCGTTATTGAGGTTAAGCATGGTAGTCAAAGTCG # Right flank : ACCTGGTTCTCCTGCACCGTCCCCATCTTCCTAGTTACATTACAGATCCAAATGGTGCGGCTCCCGCCACGCACATCATGAAAGCCAGAGTAAAGTGTGGGCTATGCTTATCAGAAGTTTCTGAATGGAACAGCAAAGATGAGGAACCTAGTTGTCGATGCATGTGAAAAGGGACTGCTAGTTAGCAGGCTTGTATCAATTTACGTTCACACACCTTGATGATTGCGAAGCAGGACAGCATTTCCAGCGGCGTTGTTGAGAAGTAAGACACTTCAAAAAGATTCCACTTGGTCGATAAAGCAAAGCTCAAGGTTAACGCCCATTCTTTGTCAGAAAGGCACTTCATTTTCCGACTCAACGAAAAAACTGAAACGAACATCCCCCCGTATATTTGTCAAAATGAAATAACGCCCTGATGAAAATAGAAAAAGAGAGCAGTATGAAAGACGATTTCACATTATGTTACGTTCTGAAAGCTTAAACAGTAAATTGGACTACTC # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTACATTGGAGACCCGAGAAGTTAGGGGACTGAAAC # Alternate repeat : GTTACATTGGAGACCCGAGAAGTCAGGGGACTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.10,-3.90] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 443628-444480 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHHYZ010000005.1 Brevibacillus parabrevis strain 179-C7.2 HS NODE_5_length_588969_cov_243.194714, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 443628 37 100.0 37 ..................................... TATACTTCACCTTTGACAATTACGCAGACCACGACAG 443702 37 100.0 36 ..................................... AGGTAAGAAAAGAGCGTTCCGAAGGCGTTACCGAGG 443775 37 100.0 37 ..................................... TTGTGATTGGAGATTACAAGGGAGGGAGGAACGAAGG 443849 37 100.0 37 ..................................... TCATATGAAACCATCGCAAGAGCCGGAAGCATGAGCA 443923 37 100.0 37 ..................................... CGAAATCATCCAATACAATCGACTTGCGCTTGGAAAC 443997 37 100.0 36 ..................................... AACAATTGCGATAATGTCGAATTGATTGTTGATGAC 444070 37 100.0 37 ..................................... TAGAACATTGATGGCTTCAACCATCCATTGATACGCA 444144 37 100.0 37 ..................................... TCCGTCGTTTTGCGAATCTGCATGTCATAGGTGTGCA 444218 37 100.0 38 ..................................... CTGCTCCACCGTGTCGATCGACATTAACAGAAAATTCA 444293 37 100.0 38 ..................................... CCCACATTTCTGACTGGCTGACGTACCCACGGCAAGAA 444368 37 91.9 38 .......T..........A...T.............. TCATCGCCTGGATAACGCTTCATTTTTTCCAGGATCTC 444443 37 89.2 0 ..................A....A....A.T...... | C [444469] ========== ====== ====== ====== ===================================== ====================================== ================== 12 37 98.4 37 GTTACATCGAAGACCCGAGAAGCTAGGGGACTGAAAC # Left flank : GGTTAACGCCCATTCTTTGTCAGAAAGGCACTTCATTTTCCGACTCAACGAAAAAACTGAAACGAACATCCCCCCGTATATTTGTCAAAATGAAATAACGCCCTGATGAAAATAGAAAAAGAGAGCAGTATGAAAGACGATTTCACATTATGTTACGTTCTGAAAGCTTAAACAGTAAATTGGACTACTCTCCATGGGAATTTTGAAGCGTTCGAGTGGCGGTTGAAGTCGTTATTTTATGTTAGTGGATGAAAAAGTCTTTTTGGTGCTAAAGGAATGGATAGATGAGATGTGGGATAATGTTTTACAATAAGTATGAGAGCGAATGCTTACCCTTTAGCGGGGAAAAAATAAATGAACAAGATGCGTACAATGATTTTCGAGGATAGGGCGTGAGTTTTGACAAGAAATGAATCCTCGAAAAAAGAGCGGTTTCTTGCTAGTATTGAGTATGGGGAAAGCCTTGCTGTGACTAGGATTAAGTATGGTAGTCAAAGTCG # Right flank : CTAAGGCTCTTGCATTTTTGTTCGTATTTGGTTATCTCGTTATATTACAAATCCGAAAAAACAGAAGACTGTAACTAAGCTGGCCTTGCCTGCTCGCGATGCTCCGACAACAAAAGATGCTAGAGAAAGTAGATTTGATGGAAAAGATGGAAAAACTTATAAAAGACGCGAAAAAAGCTGCACGAGAGACTTGCTGCACATAAACCGTTTTCAATATGGACGGTTGTGTGCAGTTTTTTTGTGGGGATTGTAACAAAATACAAGCTACATCGTCTTACTAATGAAGCCTTAAACATAAATGGAAAAAAATGTTGAAAATAGAAAAATTAAAGATTAATATGCAAAAAATTTCAAAATATTTTTAGCGAGGGGTATTGTTGAATAGAAAGCTTGTAGCAAGTTTTATTACTTCTTGCGTTGTTCTGGCGACAATCACTACTGCATTCGCAGCTACTCCGATGGGGATAGCACAATCAGAAGCGTCAATCAGTGGAAATCTG # Questionable array : NO Score: 3.18 # Score Detail : 1:0, 2:0, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTACATCGAAGACCCGAGAAGCTAGGGGACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [13,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.10,-3.90] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 12876-11358 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHHYZ010000009.1 Brevibacillus parabrevis strain 179-C7.2 HS NODE_9_length_241520_cov_243.806472, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 12875 37 100.0 36 ..................................... TGCATAAAAATTCACTCCTTATACATTATTGAGTCC 12802 37 100.0 38 ..................................... CTCGCATGGTCCGATAAGAACGTTCCAAGCCAGATTCA 12727 37 100.0 36 ..................................... AAACTGCCGCTTGAATGCTCGCTTGATAGCGTGCTT 12654 37 100.0 37 ..................................... AATCTGGCGGTGGTGGTATCTCGTTTCCGATTTTGTC 12580 37 100.0 37 ..................................... TGCGACCACGGGCCAAATGCCGCGAAATGGTTATCCA 12506 37 100.0 37 ..................................... CCGACGATCTCTCCGCGATCAAATGGATTAGTGACCT 12432 37 100.0 37 ..................................... GGGCAGCCGCTAAAGAAAAAGAAGTCATTTCGCATGA 12358 37 97.3 37 ..............T...................... CCGGTGAGCAATCGCAATTTATACTGCTGCCCATCAA 12284 37 100.0 37 ..................................... AGTCTGGCCTATCATCAGGTTCATCCTCTTCCGAATA 12210 37 100.0 38 ..................................... ACGCAGAAAAGGAGAAGAATTGGCTGATTAGATTTACC 12135 37 100.0 37 ..................................... AATGTTTGCATGACCGAGCAACTCCGATACTATTTTC 12061 37 100.0 38 ..................................... CGTTAGTGGATGGTACGCTCTACGCGGTGTCCTGTGAT 11986 37 100.0 39 ..................................... AGATCTTCGTAATAAGGGTTGATGATCGGGCCGTGAATG 11910 37 100.0 36 ..................................... ACGACACATTTCGGCTGCGTTTGTACGCCTCCCAAA 11837 37 100.0 36 ..................................... GAAAAACCGGAAAAAATGAGTAAGTTTCTCACCAAA 11764 37 100.0 36 ..................................... AGGTTTTTGTGGTCGGCGTGGAACAAGGCTTTTCCA 11691 37 100.0 36 ..................................... ATTACATCCCCGATCACAACTTTCCGGCTAAACACC 11618 37 100.0 38 ..................................... ATTTACAAACTCAGGTGCATCTAGAATCTTCGCGGATG 11543 37 100.0 38 ..................................... ACACAACATACGACAAGGACATAACCACCGTCTTGCCT 11468 37 100.0 37 ..................................... TGGCAAACACTTCTGCGATTGTCAGGTTATCAGTCAC 11394 37 91.9 0 ......................C....A.......G. | ========== ====== ====== ====== ===================================== ======================================= ================== 21 37 99.5 37 GTTACATCGAAGACCCGAAAAGTTAGGGGACTGAAAC # Left flank : CCTATGCTTATTCTTTGGCACAGAGGTACTTCCTCTTCCGCCTAAACGAAATATTTGAAGTGAAGATCACTGTATAATAGGCAAAAGTAAATGCCGTCTGGGTGAAAATAAAAAACGAAAGCAGCATGAAATCGATTTGGGATTCATGTTATGTTCTGAAAGCTTAAACAGTAAGTTGGATTGCTCCCCATGAAGAAATTTGGAGCGTTCAAGTGGCGGTTGAAGTTATTTTATGTAGTGGATGAAAAAGGCTTTTTGGATGCTAGACCGTTTAAAGAAATGTATAGATGAGATGGAGGATAATGTTTTATTATAAACATGAGAGCGAATGGTTACTCTTTAGCGGGGAAAAATAAACAAGATGAGCACAACGTGATTTTCGAGGATCGGACGTGATTTTTGACAGAAAATGAATCCTCGAAAAAAGAGTGGTTTCTTGTTGGCGTTGAGTATGAGGAAAGCCTTGTCACGACTGGGGTTCAGCATGCCAGTCGAAGTCG # Right flank : TTCCAGCAAGCCAGTCATGATGCTTGTCCTTGACGGCGTTACATCGAAAACTCAAATACAAGTAAACTAACCCCAATCCCCCTATGAGGCCCCTCAAGAAAATCTTGTAAAATGCTTCTGCACAATTGCAAATGGCACCCCAACTTGACACAGCCCCCTTCCCAGCTCTCGTTGTATTGCTGAAAATAATCGAATTTCAATCCCCTAACTTTCCAGCTCTGTCATACAAAAGTAATCAGGTAAGGTTACCCCTCGACTGCGAGGTTAGTTTCAGTCCCCTTGCCACCCACCTCCCTCCCCCAAAAATCCCCCCTATATATTCCTTTTCCACCCCACTCATGCTATATTATTAGGAAATAAGTCCCATTTCCCCATCTTTCGACAAAATGCCTCGCAATGTTTCACAAAACACCCAATACTCAAACACCTTTTTACCCAAACCAAACCCAATCTAAAAACCCAAAGACACAAGGCTCTCTTTCAGTAAAAGTGGCAGCGGG # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTACATCGAAGACCCGAAAAGTTAGGGGACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.90,-4.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [55.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 2 14893-13748 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHHYZ010000009.1 Brevibacillus parabrevis strain 179-C7.2 HS NODE_9_length_241520_cov_243.806472, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 14892 37 100.0 35 ..................................... GGAGAGTTTGATGAAAAGGTACAAGTTGAAAGGTT 14820 37 100.0 37 ..................................... AAATACAACATGACCGAAGATGCCTTCACGCTCATTG 14746 37 100.0 39 ..................................... CCGAAAATCTGCGAAGGATTGCAAACGAACCGAAAGCAA 14670 37 100.0 37 ..................................... CAACAAAACGAACGGCATAAACGGCATCATTTCTTGC 14596 37 100.0 35 ..................................... AAAACGGGCCTAGTTCTTGTCCCATATCCATCCCA 14524 37 100.0 36 ..................................... TGGAAAAGTGCTTGCAGTCCGGGCTGAGCCAGCAGA 14451 37 100.0 37 ..................................... TGGCTGTCACGCTGAAGACTTCTATGAGTGGGTCGAA 14377 37 100.0 39 ..................................... AGTGATATCTTTAGGATCCTGGTATGCACCTTCCACCAA 14301 37 100.0 35 ..................................... AGCAAGTACATCGAGCATACGGAGCATCTGGCAAG 14229 37 100.0 36 ..................................... AGCGCGGAACGTGCGATAGCAAAGAGCGTAGGCACC 14156 37 100.0 39 ..................................... CTGGATCTGTTGGCGGCAGCATGTCATTTAGCGTGATCT 14080 37 100.0 37 ..................................... ACCTTTTGCACGAATTAGAAAAGGCCACCATTAAAAA 14006 37 100.0 36 ..................................... TGGATTGGAAGTACATAAAATTAGCGAGTTCTCAAT 13933 37 100.0 37 ..................................... TGCTTCAACCTGTAATCAGCGATGATAGCGTTGATGA 13859 37 100.0 38 ..................................... GTACGGCAGGGATAGCTGCAACTCACCGTTCTTTACCT 13784 37 81.1 0 ...................A.GTA..CA........T | ========== ====== ====== ====== ===================================== ======================================= ================== 16 37 98.8 37 GTTACATTGAGGACCCGAGGAACGAGGGGACTGAAAC # Left flank : ACATGGGACCCAAGGCAACCTTTGAAAGCATCAGTTCTTTTGATGGTACGAGTGCAAAGATGGGACGAGACCGAGTTATGAAAACGGTGTTTATTCCGTATCACCAAAAGCGGGCAAGCAGGGATTTTACTTGGTATACGCGTGAAGAGAGTTAGGTGGTTTGGTTGGAGCAGGGGCAGAAGACAGAAGGCTGCCCCTCCCCTTTTAGGTGAAGAGATTGGTTGTGGTGTTGTTGTCAGGAAAAGATGGAAGGGTCTTATAAAAATGGGGAAAATGATTTATTATTGACATGAGAGTACATTGTTATGCAGAAGAAAGTGAATACTAAGGCTAGGTATTAGGGGTAGCGGAAAAGCAATACAGACGAAAAAAGGGATTTTCGAGGATCGAGCGTGTTTTTTGGCAGAAATGCAATCCTCGAAAAAAGTGAGGAATGCTTAGGGCTGTGAACGCGTGTAAAGCCTTGGTATTACTGAGTTTAGTTGTGCCGATCGAGGTCG # Right flank : GGCTGGCGCTTATCGTCGCGTCCGCACTCTTGTGTGGTTGCATTAAAGACCGAATAGTGCTGTTCCGACATGTAGATCATGAAAGCCACCGTTAAGTTGAGCTATGCTCATTAGAAGTCCTGAATGGAACGGCGGAGGAAAGGAATGCAGGGGAAAAGCCACTGCTTGATAACGGGCTGGCACTGATTGATGTTCACATGTGCTAAAGCAGGGCAGGGCTTCCAGCGTTGATGGAAGGCAGTTCTAAGAGTAAGGCAAGTTGATTTCCAACAGTGGTGTTGAGAAGATAGACACTAAAAAAGGCACGGAATTGATCACCCGTGCTTTCCAAAAGATGCGATTTGATGAATAAAGTAACGCTCAATGCTAACTCCTATGCTTATTCTTTGGCACAGAGGTACTTCCTCTTCCGCCTAAACGAAATATTTGAAGTGAAGATCACTGTATAATAGGCAAAAGTAAATGCCGTCTGGGTGAAAATAAAAAACGAAAGCAGCATG # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTACATTGAGGACCCGAGGAACGAGGGGACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,12] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.90,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA // Array 3 31076-30746 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHHYZ010000009.1 Brevibacillus parabrevis strain 179-C7.2 HS NODE_9_length_241520_cov_243.806472, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 31075 37 100.0 36 ..................................... AATGAATAAAGAGAAGTACGGGGGTGGGATCACCCT 31002 37 100.0 37 ..................................... CACATCATACTGAGATTTGTCGGTACCAATTCCCCCT 30928 37 100.0 36 ..................................... TGAACAATCACCCGGCATCCGCCTCGTGTCGCATCC 30855 37 100.0 36 ..................................... CGTGTTCCTCGATCCGCCGCAGCAGTGGGCAGTATC 30782 37 83.8 0 ................A....A....AAA...A.... | ========== ====== ====== ====== ===================================== ===================================== ================== 5 37 96.8 36 GTTACATTACAGACCCGAAAAGCAAGGGGACTGAAAC # Left flank : CTAAACGGCGTGGAATTTCGGTTTTGGATACAAGCTTCACGTTGTACTTGTCCGAAGGTTTTGTGAGCTGATTTTTTATGTATAAATCATTTCGAAAATTGGAAAGAGGGTAATCCCGCACATCGTGGAGAAGCAATATTAGGGAAATGAAAATGTATCTTGTATCTAAAGGTAATATAGAGAAACTGTAACTGGCTTTGCTCCAGAGTTACTTTGTAACCTAAACTATCATTTACCACTGGTCAGACGACAATTCGACTTAGCGAACCACATAAACCTATAGCTGAAAGTAGAGCAATGTTTTATTATAGACAGGAGAGAGAATGGTTATCCTCTGGCGGGAGAAAATAGACGATATGGGGTACTCAAATATAGACTTTCGAGGATAGGCTGGATTTTTTAACAGGAAATCAATCCTCGAAAAAAGAACGATCTCTTGTTAGTGTTGAGATTAAGACAACCCTTGGTAGAAGTGGATTCGTTTGCGTTAACCGAGGTCG # Right flank : CGATAGACTGATAAGCGTAGCAGCAGCCGAGTGCCAAGTGCCGAGGAGACTGAAGCGCTGCTCGATCATATGTCCAACCAGTTCTTTTTTCCGATTGCATGAAAAACCCGAAACCCTAGAGACCCCAACTCGAAGTCGAGCGTTTGCCTCAAGTACATTCAGTTTTTGCCCGACCTTTACACTGATCAGTGAGGGAATTGTCTGAATTGCACGATAATAAACAGTGGAACCACTCCCTTATCTTTTGATCGCGCCTTTCCCAATACCTGAGCAATCTGTATAAACCGATATGCATGAATCGCTTCTCAAAAAATCAGCATCTCATAACTATCAGCACTCTCCCAACATTAAACTCTCTGCCTTTACTCATGCAGAGAGTTTTTGTTTTTCTCAGATGCCGTTTACTCCATCAATTTTCGGACGAGACTGAATCTATCCTACTAAATGCTAAATGGGAGTGGATGTTTGTGCAGGTAGTAATTGATGAGTACGGATACGCC # Questionable array : NO Score: 2.90 # Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTACATTACAGACCCGAAAAGCAAGGGGACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.20,-4.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA // Array 4 36321-35396 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHHYZ010000009.1 Brevibacillus parabrevis strain 179-C7.2 HS NODE_9_length_241520_cov_243.806472, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 36320 37 100.0 37 ..................................... TTGCCCATCCGGAGTGATCGCGCAGCTCATCCAAGAA 36246 37 100.0 37 ..................................... ATCGGGGGAGTCAATGCCGCGCTTTATTAGTAAAGGA 36172 37 100.0 38 ..................................... GCGCGGAAAAGTTATCGCTGGATATTCAATCGCCTATC 36097 37 100.0 39 ..................................... TACAGCCGCATGCTCTATGAAAAGTGGAAGCGAGAGGAA 36021 37 100.0 37 ..................................... GAAAAATAATGGATTTGATCAGTTAAGGTTAAACGCC 35947 37 100.0 36 ..................................... TTTTTGCGATCTTGACCGCTTCCAAGATGATTTCCC 35874 37 100.0 36 ..................................... TAGTGAATAAAATACCTGTGCTACATGCTCTTAAAC 35801 37 100.0 37 ..................................... ACAATGAATACTCTTGCTCGTCCATGCGGGGCTTCGA 35727 37 100.0 36 ..................................... TGGACGACGAAAATGACTCCGTTGCAGCGGAGTCAT 35654 37 100.0 37 ..................................... AACATGATCACAACTGCTGCAAGCATAATAAGGCTGG 35580 37 100.0 37 ..................................... TCAATTAATTCCAAAGCTTTACGTTTATCAATGTCTC 35506 37 97.3 37 ..................A.................. CAGTTTTTGAAAACGAGGATCACACCAGCAATAGCAG 35432 37 86.5 0 .......C..........A........A.C......A | ========== ====== ====== ====== ===================================== ======================================= ================== 13 37 98.8 37 GTTACATTGAAGACCCGAGAAGTTAGGGGACTGAAAC # Left flank : TGGAGCAGGGCCGGATTTCCACCGCTGTCCGGTGACGTATCAAGGTCATGAGACACTGATTCTCAACCGTGGCATTGAAAAAGGATGTTAACAAGAAAGACACGGAATGGATCTTCCGTGTCTTTTAATAATCAGTTGTATTGCAACGGACCGGATAGCGAGTGGTTCTGAAATGTCCAGCTTTCCAGGTTGCAGGGGGATATTGTTTGTTTTTGCGATTGCAATCTTTAGTTCTCGATTAGATAGCTCTTTTAGTATTGGGCAGTACCAAGAAATGTATAGATCAAATGGGAGGAATGTTTTATTATAGGCATGAGAGTGAATGGCTATCCTTTAGCGGGGAAAAAATAGACAGACAGAGATAGTTAAAGTCAGATTTTCGAGGATAGGCTGTGGTTTTTGACAGAAAATGAATCCTCGAAAAAAGAGTGGTTTCTTGTTGGCACTGAGTATGAAAAAAGCCTTGGTGTGACTGGGGTTTAGCATGTTAGTCAAAGTCG # Right flank : GCTCAGTCAACATGTGTAGTTTTTGAACGACCTTGTTCTTGAGGTAGTAGCAAGCTGCCTCAAAGCTGCCGACAACGAATAACATCCAGTAAACAGCAAGAAGCATCCTCTGCTATTGGAGGATGCTTCATTTTTAGAGCTATTTGATCTCAAAATCGTGTAGCTGTTGTATTTGCCAAGTGCTATGTGCTTTCTCGGATTTTTTGGGTCCAAGTTGATTACTTTTTTCACAACACATCCAGCATGAACAGTGAATTTTACCTTTGGCTAATCGACCGTAATCATCATTTTTTACTTTCCACTCATAATGCTTGATGATACTCAACCTACGATTAATAACTCGCTTACGATGGTGTCGGTAATAAGCTCGATTTCGATTGGATTGGTACGGCTTTAACATATAAAATCACGCTCCCCCGGCAGATGAGCTTAGCCTGTAAAAGCCCCCAGGGAAATGTTTGGGCTGTTACAGGCTAAGCATGGAGGGAGCGGTGAGGCGA # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTACATTGAAGACCCGAGAAGTTAGGGGACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-3.90,-4.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //