Array 1 67415-65496 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAOXR010000005.1 Lactobacillus acidophilus strain BCRC 17481 Scaffold5_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== =================================== ================== 67414 27 100.0 34 ........................... TAAGAGAAAACGGTGGTTTCCTCTTATTTTTATG 67353 27 100.0 34 ........................... TCATTGAGACACACATTGCGACGACTAAACTCTG 67292 27 100.0 34 ........................... TTTTAATGAAAGGTGCTAGTTTTGTGACACTTTG 67231 27 100.0 34 ........................... TGATTTTCCAGATTCGGCTACTATTTTGGCAGAG 67170 27 100.0 34 ........................... CTTAGGCTATTCCGCACACAATATGTGGCGTGGG 67109 27 96.3 34 ..............A............ TGACTGCAATGCAAGCAAGAGCGGACATAGCAAG 67048 27 100.0 34 ........................... CGTCATAAATTAGCTTTCTGCCCTTTTGCGTCCG 66987 27 100.0 34 ........................... TGCTGCTACGAGCGCTTTTGGTCACATTAAAGAG 66926 27 100.0 34 ........................... TCATTGATGCACCGGTACTTAACTCAAATCAAAG 66865 27 100.0 34 ........................... TGACTACGATATTTTCTTTTAATTATATCTTGGG 66804 27 100.0 34 ........................... CAATATCATCAGCATTTTTCACACCAGAAAATAA 66743 27 100.0 34 ........................... CGATTTGCGTGGCAAATGAATGGTTGATCTTGAA 66682 27 100.0 34 ........................... TATTCTTTTTCACTATCAAAATCAAATATTTCTA 66621 27 100.0 34 ........................... CACAAAAAAGCCACCTAGAAGATAAAATTCTTCA 66560 27 100.0 35 ........................... CCTTAACTAGTGCAAATTTAATATTTGGATAGCTA 66498 27 100.0 34 ........................... TGTTTACAACATCATGGTTAGAGCAAAACTTGTA 66437 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 66376 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 66315 27 100.0 34 ........................... CTTTGGCCATCTTCGGTCTTAAACTTAGCTAAAA 66254 27 100.0 34 ........................... CGGGTAAACAAGTCAGAGTTACTCGCAGCAAATA 66193 27 100.0 34 ........................... TTAGGCGAAACCCCGAGAGCAATTTCAAGCACGA 66132 27 100.0 34 ........................... TAAAACGTTGAAGCTTATTGTCCGCTTTAACGTA 66071 27 100.0 34 ........................... TGTTTACAACATCATGGTTAGAGCAAAACTTGTA 66010 27 100.0 34 ........................... TGGGTACCGAGGGTGGCAATATCTTCCTTATTTA 65949 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 65888 27 100.0 34 ........................... CGGAATGTATGATAAAAATTGGCTATTTGCCTAA 65827 27 100.0 34 ........................... TATTGATGCAACACCTAGCGCAAGTCAACCTGGA 65766 27 100.0 34 ........................... CAGGGTGGTTTTAAGTACGAGATTGACTACGATA 65705 27 100.0 34 ........................... TGGCGAGAAGCTTATGAAGATCCTAGGAAAAGGA 65644 27 100.0 34 ........................... TATATGCGACTTATTTCTTACGATGAGATTCCAA 65583 27 92.6 34 ...........A.A............. TCGATGGTAACTCTGTAGCTTTTAGAGCCTTTTA 65522 27 74.1 0 ....T..T.T.A.A........A.C.. | ========== ====== ====== ====== =========================== =================================== ================== 32 27 98.8 34 TTTTCTCCACGTATGTGGAGGTGATCC # Left flank : CGTGGTTGTCTGCAGCAAAGGCTATCCAACGCACCCAGCACCTAATGTTAAGATCGGCAAGCTGCCTGAAGGTGCTAATACCTATATCGATTACGCCAATGTTAAAGGTGATTTGGAAAACTTGACGGGTGATGGTGGCCGCTTGTTCATGGTGATTTCGGAAGCTGACAATTTAGTTCAGGCACAAGACAATGTTTATTCTTATTTAAGTAAGCTTGATCTGCTGGATTGCTTCTACCGGCATGATATTGGTAATCGTGCTTTGGGAGATTTTAATATTATATAATGTCTTAACTTAATGACATTGATAAGGCTACCCATATTTTGTTTATTTGTAATCCTGTGAATATAATAGCAATTTAAAATTATTATATGAGCTAGATATATGTAGAAGAATATTTGATATAATTGTGTCGATGATTTGGTTGGGGAAATGCAAACTAAAGAAATTTTGCTTTTTAGTAAATTTAAAATAGCTTAACGATGGGATTCCTTTAGTG # Right flank : TGAAGCACAATATTTTTAAAATAATTGGGCAAGATTTTCTCCAAAAAAGTGGAGCTACATTAACGCAGTGAAGGAAAGATCACAAGAAAAAGTCCCTAATCAGGGCTTTTTTCTTTTCCAAAAACAACATGCTGAAATAGTGTACCGTAAACTGGTAAAATAGATAAGTAAACATAGATCAATTAATAAATAAGGGGGAATAAAATGGCAGATAAAAAATTACTTCTAATAGATGGAAATTCAGTTGCTTTTCGTGCCTTTTATGCTTTGTATCGGCAACTTGATCGCTTTACTAGTCCAGATGGGTTGCACACTAATGCGATTTTTACCTTTAAAAACATGTTGGATGCCATTCTTAAACAAGTAGATCCAACTAATATCTTAGTTGCTTTTGATGCGGGCAAAGTTACTTTCAGAACTGCCATGTATAAAGACTACAAGGGCGGCAGACAGAAGACACCTAGTGAATTGCTTGAACAAATGCCTGTTATTCGTGAAAT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTTCTCCACGTATGTGGAGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.85%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.10,-6.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [9-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //