Array 1 17-715 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QDAT01000014.1 Listeria monocytogenes strain ICDC_LM1605 LM1605Scaffold13_1, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
        17	    36	 100.0	    30	....................................	CATCGAATTGATACTTTTCGAGTGAAGCAA	
        83	    36	 100.0	    30	....................................	GTGGGAAACGTTAAATATTATAAAACAGAT	
       149	    36	 100.0	    30	....................................	GCATCGTACCCCAGTTCATGAAGCGCGGTA	
       215	    36	 100.0	    30	....................................	ACAAAACTCTCTAATTCAATTGCTCCATCA	
       281	    36	 100.0	    30	....................................	TTTATAAAGAATACTTGCGGGGCATAAATG	
       347	    36	 100.0	    30	....................................	GTCTAAACTTGGAATATAACTTAGGTCTTG	
       413	    36	 100.0	    30	....................................	ACTGATGAAAGTATTTCTCCAATGACAAGT	
       479	    36	 100.0	    30	....................................	TTAAATACGATGGAATTAATCTATCGATGC	
       545	    36	 100.0	    30	....................................	TCAAAGAGTTTATACCTGTTTTGATTGAGT	
       611	    36	 100.0	    30	....................................	TAATATTCTTCCCCCCCATCGCTAACAGGG	
       677	    36	  86.1	     0	.............A.....C.....T.A.......G	|                             	A,A,C [702,708,711]
==========	======	======	======	====================================	==============================	==================
        11	    36	  98.7	    30	GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC	                              	       

# Left flank :   GTAATAAATGGGTGACG
# Right flank :  GATAAAATGCATCGCAATTACCAAACCATGGTTAAATTTAAAAAGGAGTTAGGCTATCTATATGACACAGTATCACTATCTTGCTTCGAAGTCACTCTTAGAAAATGATGGGGAAAAGTTCCCTCGTCTTTATATTAGACTTCTTAAATTTGAATTTTGATATGAATGTTGACCAAGACACTAATGAATTGTTTTTCTATTCAATTGATTTGAACTCAGCTTGTAAATCTAAGTAAAGGGAACCTGCCGCTGAAAGGTAATGGGCAAAAAAATTGTTACGAGACTAAAAGTTTAAAAATCTTGTATGATTATATTCTAAATACGAGTAAAGATAATGACACGCTTGAACTATATACTGCTTGGAAAAGCGAGGAAGATTTCCTGCTATTGAATAAAACAGAACTGCTGATCTAGAATTTAACTATCGAAAATCTAATTTTAAATGATAGAGAACTATTAGTAATTAAAAAAGAAAACCGATATAACTTTTAGCACCATTC

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:69.44%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGAGCTATGTTATTTTGAATGCTACCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-1.30,-0.80] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [16.7-63.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.87,0.27   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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