Array 1 22093-21397 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABASA010000025.1 Streptococcus ursoris strain DSM 22768 SS1902_25, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 22092 36 100.0 30 .................................... TTGTTTTTCTAGTTTCTCATAGATTTCTAT 22026 36 100.0 30 .................................... TGGACATCTCAGATGATGACTTGCCTTTCT 21960 36 100.0 30 .................................... CATATCCACATATCCGCCAAGAGAACCACC 21894 36 100.0 30 .................................... AGCTGGGATTGTAAGGTTTGCAGCACCTGA 21828 36 100.0 30 .................................... CAAACTAGAAATCGTTTTTACGGATAAATA 21762 36 100.0 30 .................................... TGAATTGTAGTGCTCGACTGAACAACGGGC 21696 36 100.0 30 .................................... TGAATTGTAGTGCTCGACTGAACAACGACC 21630 36 100.0 30 .................................... AGACCCTAATCAGGAAGTTGCCAGCCGACA 21564 36 100.0 30 .................................... TTATAAAGTAGCCGAAGGCTTTTTGTGTGC 21498 36 100.0 30 .................................... TTTTGGTAACGCTGTGAAAGGAATCCTGAA 21432 36 97.2 0 ...................................T | ========== ====== ====== ====== ==================================== ============================== ================== 11 36 99.7 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : GAGGAAAAGGGATACTGGGTTGAATTTCCTGAATTTGGTGGTGGTACACAAGGGGAAGATTTGGAAGAAGCTATGAAGAATGCTCGTCAAATGTTAGAAAGTGTACTGGTATCTTATTTAGATGAGGGAATGAAATTACCTAGTCCAAGTGACATAAGGGAAGTGTCTGTCGATGATGGTTTCGTTACCATGATTCAAGCTGATCCTAGTCCTTATCTTAGAAATAACAAAGCCGTTCGGAAAAATGTGACGGTTCCCGAATGGTTAGTGCGATTGGCAGATCGTGATCAAGTGAATTATTCTGAAGTACTAACAAAGGCTTTGGAAAAGAAATTACAATTATAAATAAAAGTAGGAAGTGCTGGAAATGTTGATTTTTAGCGCTTTTTAAGGTATAATATAAATAATTAAAACTTTAAAAAGGAATCATTTCGAAGCTGAAATCTGGCTGAGATGAATAGCGCGATTACGAAATTTCGGGACGAAAATTGGTCCACGAG # Right flank : CTAATTTTGAAATTGGTTTGTCGATCTTTGATCTTTTAGGTTAAGTCTGCAGTGGGGGAGAACCGTTTGAAAGAGAATTTACGGATTTTCTTTTTTTAGTTTAAGCATTGAAAAAACTGCAGCGGATTCACTGCAGTTTTTATGATGCGGCTTTTAGTCTGTTTCGCGTCCTTTGGCGCAAGTAAATACCAGCCGCATAATGGGTAGTTTATTTGTCAGACAGGATAGGCGTCAGCTAATAACAGTGCCGATAATTTCTATGTCGTCATCTTCTTGCAAAATAATATCGTCATAATGAGGATTGATCGAAATCAGCCTGATCTCATGGTCTTTTTTGTATAGTTTTTTGAGATAAGCTTCATTGTTGACAATGACAACGATAAACTGACCGTGGTAAATTTCCTGTGTTTTCTTTACAAAGATGACTTCACCGTTATAAAACAAAGGTTCCATACTGTTGCCGTTTACCCTGAGAGCAATATCGTGTTTAGGAATAGGTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], // Array 1 92617-92885 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABASA010000010.1 Streptococcus ursoris strain DSM 22768 SS1902_10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ===================================== ================== 92617 24 100.0 37 ........................ TACGAGTTACCCGCTTATGCCAATAAGACAAAGGTTT 92678 24 100.0 37 ........................ TCCTTCGAAATATGAATACTCCGCAATGGAACAGTTT 92739 24 100.0 37 ........................ TAGAGTAGTCCACTATAACAACGAGGCTAGTCAGTTT 92800 24 100.0 37 ........................ TTACACTCAAACTCTGACAACTTGCCAATTGTCGTTT 92861 24 79.2 0 .......G.GT..........GT. | A [92880] ========== ====== ====== ====== ======================== ===================================== ================== 5 24 95.8 37 TACCCGCACACGCGGGGGTGATCC # Left flank : ATAAGAATAAAATCATCGAAATTGGCGCTATTAAGGTTTCTGGATCAGAGTTGAAAGAGTGTCATTACTTAGTACAGTGTGATAATACACTGCCAAAAGAAATTGTGCAGCTGACAGGTATCACAGATGATATGTTACAGCAAGAAGGTGTAGATACTGAGTTAGCGCTTAATGGATTGTTGAATTTCATTGGCAGTCTAGATATTGTAGGATATGGTGTTAATTTTGATTTGACATTTATTAATACTAAATTAACCGAGCTTGGTTATCCTGTCATAACGAATTCAGTGTATGATTTGATGAAGTATGTGAAATCAGAGAAATTATTTTTAGAGAATTATAAATTACAGACGGTGCTGAAATCATACGGGATAGATGAGAAAGTTCCTCACAGAGCTCTTCTTGATGCAAGACTCATTCTAGACTTGCCGACAAAAGTGAATAAATTTTTGATTAGGATCAATCAGAAGTAGCGATTTTATTGGGATCTTTTAGTGTTT # Right flank : CTGGCTATAATGTATTCCTCAATTCAATAAAAAAAGACAACTGATCAAAGTTATCTCTTTACATCTTAAATAAATCTGCATGACTGCCTGTATCAACCAGAGTTAAAGTCAAAATATCATCCTCTAATAGGTAAATTAACAGCCAATCAGGTTTAATATGGCATTCTCTAAAACCCTTAAAACTACCTTTTAGTTCATGATCTCTATACCTATCTTCCAAAGCCTGTCCTAAATGCAGCTTTTCAATAACATCATCTAATAATGATACATCCATTCCCCGCTTTTTCATACGCTTAAAACTCTTTTTAAAAGCAGAGGTAAATTTAACCTGATACATCTACGCTTCCAAAGCTTTCTTCAAATCTGACATATTATCATAAGCTACAACCGCCTCATCATGAGAAATTCGTTTGGCTTCTGCCATGGCCTCTAATGTCTTAGAATTATAATTTGGAAGTTCTACATTAAAGGGAAGACCATTATGTAAAAGACATTGACGT # Questionable array : NO Score: 5.85 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TACCCGCACACGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched TCCCCGCACACGCGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.90,-9.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //