Array 1 2820962-2824039 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHMB010000001.1 Nonomuraea jabiensis strain DSM 45507 Ga0374001_01, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2820962 29 100.0 32 ............................. TACCCCTGTCCATCGAGATCAAGGACCCGTCC 2821023 29 100.0 32 ............................. CACATCCAGGCGGTTGACGCCATGCGCCCCCC 2821084 29 96.6 32 ............................T GGGCCACCCTATCTCGATCAGCACCCGCGAGG 2821145 29 96.6 32 ............................A CGCCCCAACGACGCCCGCTGTGATCGCCGCGC 2821206 29 96.6 32 ............................C GATGTCCGCCAACAGGCGATAGTTGTACTTCC 2821267 29 96.6 32 ............................T TCGCGACCCATGTAAAGGATGTCCTCAAGCTC 2821328 29 100.0 32 ............................. TGCAGTGCCTCGCGATGGGCGTCGTGGAGCAG 2821389 29 96.6 32 ............................C GGGGCGAGCCTGGCCTGCCAGGCGGTCGAGGC 2821450 29 100.0 32 ............................. AACGTCGTGATCGTGGTCTGCACCGTGACGTG 2821511 29 100.0 32 ............................. CGCGGAGGCCGGCCAGGCATTCCTCTGGGGTG 2821572 29 100.0 32 ............................. CAAGGGGATTCCATCATCGTGGCGGACGAAAT 2821633 29 96.6 32 ............................C TTCCATTGCACCCCTTAGGTTTTCGCTGGTCA 2821694 29 100.0 32 ............................. ATGAACACCGACGTGCGTAACGGGCTCAACTT 2821755 29 100.0 32 ............................. CCGCCGACGTCACCCAGGAGTGGGCGTCCATC 2821816 29 96.6 32 ............................C GTAGCGTGACGTGGTTTCGCCCGGGGGGATGC 2821877 29 100.0 32 ............................. CACTACGTGGCGAGCCTGCCGCCTTATACGTG 2821938 29 96.6 32 ............................T CTGGTCTCTCACCAGTTCGCCCCCGCCACCGA 2821999 29 96.6 32 ............................C TGCGGCGAGGCGAACGCCCTCGCCGAGCTGCT 2822060 29 100.0 32 ............................. AGCACATCGCCGCGATGCAGGCCGAGGGGGAC 2822121 29 100.0 32 ............................. AGCACATCGCCGCGATGCAGGCCGAGGGGGAC 2822182 29 96.6 32 ............................T CGGATGGGCCAACGTGATCTTCACCATGTCAC 2822243 29 96.6 32 ............................C CCGGAGGGTTCATCACGACCGACATATTCGAT 2822304 29 96.6 32 ............................C CAGGACCGGCAAGACCGGTACCCGGATCTTGT 2822365 29 100.0 32 ............................. CCGACCAGCGCGCACGGGTTCTCCGCCTGCGA 2822426 29 96.6 32 ............................C TCGGCCTCATAGTCCCTGTGGACGAGCTGAGC 2822487 29 100.0 32 ............................. ACCAACCCCGGCCCGGCCGACCTTGTCGATGC 2822548 29 89.7 32 ....A......C................T CGACTGGACGGACGAACACCTGGCCCTCCGTG 2822609 29 100.0 32 ............................. TGCGGCAGGATGTGCGCGCGGATCATGTAGGT 2822670 29 100.0 32 ............................. GCGGTGCGCCGTTGGAGTGGGCCCAGCTCCCC 2822731 29 96.6 32 ............................C ATCAACGGCACCACGATCTTCACGAACCAGAA 2822792 29 100.0 32 ............................. GTCGCGCTCGGGATGGCGTACGCCACCCTGCT 2822853 29 96.6 32 ............................T GGTCCCGCGCGAGACGGGGAGTTCTTGATCCA 2822914 29 96.6 31 ............................C AACGAGTATGAGGGGGGAAGGTGCAGTCTGG 2822974 29 96.6 32 ............................C TGGTCGCCGAGGGGGATGGAGGCGCGCTTGAT 2823035 29 93.1 32 ......................C.....C CCCTTCCTGGTTAGCCCCTCCGGGTGATGAGG 2823096 29 96.6 32 ....C........................ CTATGGACGCGTTCGTTCAGAACTTCGACCAC 2823157 29 100.0 32 ............................. GTCGGCGGCCGGTGGGTCATCACCCTCGCCGC 2823218 29 96.6 32 ............................T AGGTCATGCCGTGCGCCTCGACCCAAGGTAGA 2823279 29 100.0 32 ............................. CACATGTCGCACATGCTGACCGGGAAGGCGCC 2823340 29 96.6 32 ............................C TCCATGGCCACCTCGCGCGGTGCCGCGGGGAG 2823401 29 100.0 32 ............................. CACACCTTGGCCATCTCGGCGTCGCTTGTGGC 2823462 29 96.6 32 ....................A........ AGCGCCTTCCCGGCCACCGAGCCCGGCCGTAC 2823523 29 93.1 32 ...........A................C CTGAGGTGCCTGATCCCGTGCAGTAGCACGTC 2823584 29 89.7 32 ................TC..A........ GAAGGCAGCCCGGCCGGTGACCGGTTCGCGAA 2823645 29 93.1 33 ....A................A....... ACGCTCAAGGAAGCGGTTCCCGGACCGTCAGCC 2823707 29 93.1 32 ........T............A....... CCGGTGGGGAGCTGGACTTCACGTCCCAAATG 2823768 29 96.6 31 ............................C CCTTGACCTGCTGGTTGACCTTGAATTCGTA G [2823785] 2823829 29 89.7 30 ...............A...........GT GTCACATGCCGCCGTTGACGGGCAGTCGCT A [2823850] 2823889 27 93.1 31 .................--.......... TGGCGGCGCCGGCCTGGCGGAGTCCCGCTCT A [2823892] 2823948 28 82.8 33 ...-A.................GT....C GTGCAGGCCGAGGATATGGGGGGAAGTACTGGC A [2823969] 2824010 29 89.7 0 ....................C..T.A... | C [2824028] ========== ====== ====== ====== ============================= ================================= ================== 51 29 96.7 32 GTCGGCCCCGCGCACGCGGGGGTGTTCCG # Left flank : GAAGCCCGGCAACGCGCCCGGCAGCTCAAAGCCCGCCTCAACGCCCTCGGCGTCACCCCCTCACCCGAAACCCAAACCGTCCTAAAACAACTGAACGGCCCTTCAAACCCGCCATACAGGCTTTAGCTGCTGCGCGCTGGCTACAACCGTCCAGCAACAAGGCGCTGATGCCTGCCCACGTCACCTTGTGAAACTGGCCAGCTTGCGTTGGCCTGCGATCGAGTCTGAAGGCATAGCCCAGCGGAGCTTGGAACCGTACCTGGTTGGGCCACCCTGAACTGCCTCAAAGGCACTCGTGCCCCCAACCAACTCCGTACCCTAGGTACATCGCCACCGACAAACATCGCTGCCAGGCACACCGCGATACCCTTCACCTCCTCGACGAAGTTAGTGGACCCAGCATTTCTGGAGAGGAGCGCAGGAAGGTGAAACAGCACCCCGCTGTTGCACAACCGAAGGAAAACGGCGCCTTCCGCCGATAAACCCGCAGGTGAACAAGT # Right flank : GCCATGCTCGGAATCCGCGCCCGTGTTGTAAATCCCTCTATGGGCGACGTGTGGGTTGGTCGGTGCGCGTACCCGCCACGGCGTCGTCGTGATCCCTGTATGTGGAGGCCATAGCGTGATCTGTGGGGTTAGCATGGGCGCGTTCGGGTGATCCCGCAGGGCCAACCGACCTGCATCGTGAAGCCGGCCTCTTCATCGAAGGTGGTTACGCGATGAAGAGGCCGGGGGACGGCATTGTTGAGCTGACGTTTTATCGGCGGTTGCGGGCGGAGAGAATCAGTCCGTCGAAGTCGACGGGGTACCAGCGGTCTTTCCCGGCCGTGCGGAGAGCCCAGCCTTGTTCGTTGGAGGCGGGTTCGACGAGGATGGCCTGGCCGTCGCCGATGCGGTTGGCGAGGAGGGTCCAGATGCGGTCGCGGATGCGTTTGCTGGGGTTTCCGACGAACATGCCGGCGCTGACTTCGACCATCCAGCGGGTGAGGTGGCCGCGTAGTCCTTCG # Questionable array : NO Score: 5.60 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.50, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCGCACGCGGGGGTGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGTCCCCGCGCACGCGGGGGTGTTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-26] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 2834012-2841438 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHMB010000001.1 Nonomuraea jabiensis strain DSM 45507 Ga0374001_01, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2834012 29 96.6 32 ............................C CAAGATCCCCGGAGCGGAGCTACATCTCCCGG 2834073 29 96.6 32 ............................T TACTTTGGCGAGTTCTTCGGCGCTGGAATGGC 2834134 29 100.0 32 ............................. CTGCATCGGGATATCGCGTTGGCCACCAGGTT 2834195 29 96.6 32 ............................A CATGGGGATGCCCCCGGGCCTGGGTGGGATGA 2834256 29 100.0 32 ............................. CGTGATGCCGGTAGTCCAGCAGATGATCAAAG 2834317 29 100.0 32 ............................. CTCGCGAAGAACGGCAGCGTAGGGACGCGAAG 2834378 29 96.6 32 ............................T GCGGGATCGTGTACGTGCCGTCGTCGGCGACC 2834439 29 100.0 32 ............................. GACAGCATGGCGATGCTGATCCGCATCATGGT 2834500 29 100.0 32 ............................. CCATCGACCTGGCCGCCGTGGCCGGTCTGCAC 2834561 29 100.0 32 ............................. TCGTCAAGGCCGGGCTGCCCGAGGATCAGGCC 2834622 29 100.0 32 ............................. AGGGGCTTTGATGGATCTATCCGAGGAGTAGA 2834683 29 100.0 32 ............................. CCTTTGGCGACATGTTCGCGGGCTGGACGGTC 2834744 29 96.6 32 ............................C GCAACCGCCCCGCCCACAACGCCGCCGACGAC 2834805 29 96.6 32 ............................T CCACAAGGGCCTCATACGCTTGCCGGTCGTAC 2834866 29 96.6 32 ............................C TCCGCCGCGGTCTGCGCGGGGTCATGACCGGC 2834927 29 96.6 32 ............................C CCGCGGGCACCACGGAAGCGGGTCCGAGCGCG 2834988 29 100.0 32 ............................. CCCAGCGAGCGCGTTCTGTTCCCGTCCGTCAC 2835049 29 100.0 32 ............................. CTTTCGCGGCTGATCCGGTCGGGCCGCCACGG 2835110 29 96.6 32 ............................C CGGAGCGTTTGCGGGTTGATCAGTCATCACGC 2835171 29 100.0 32 ............................. GCGGCCGACGAGTCCGTCACCTCGAGCACGAC 2835232 29 96.6 32 ............................A CGCTCTGTCGCCGGCGGGCAGGACCGCGGCCG 2835293 29 96.6 32 ............................C CACCCCGGCTGTCTGGTCGGGCTCGACTCCCT 2835354 29 96.6 32 ............................T CCCCGCCTGGGCCGGCCCAGTGTTCGCCTCGA 2835415 29 96.6 32 ............................C CGCCAGGCAGAGACATCGTCGTACAGACGGAT 2835476 29 100.0 32 ............................. GTGCTCGACGTCGCCAACAGCGGCGGCGGGGA 2835537 29 96.6 32 ............................C ACGATTTGAGGCAGCGACGGACCCGCCGTGAT 2835598 29 100.0 32 ............................. ACCCTGGTCTGGCGCGCGGCCCTCCTCCGCAT 2835659 29 100.0 32 ............................. TCGCCGAACGCGTGGCGGATGAATTCGGCCAG 2835720 29 96.6 32 ............................C CCACCCAGGGGCCCAGTCGTAGAAGGGTTCCG 2835781 29 96.6 32 ............................T GCCCGTGCGACCAGGTCCCCGACTCGGCGCGT 2835842 29 96.6 32 ............................C CCGATCGAGCGCGGCAGCGAGGCCTTCGCCCG G [2835859] 2835904 29 100.0 32 ............................. CGGCGCGACCTGATCGACGCGATCGAGACCGG 2835965 29 96.6 32 ............................C GATCCCCGCCATGGCCGAGGCCTCTGTGACAG 2836026 29 96.6 32 ............................T ACCAGACCGGTCCAGTCCAGGTACGGATTGTC 2836087 29 100.0 32 ............................. GTGTCGATGTCGCCAGACAGCGCGGCCTTGAA 2836148 29 96.6 32 ............................C GACGGTCCAGACGTCAAGGTCATCGTTCGAGC 2836209 29 100.0 32 ............................. TACGCGACCGGAAACCGGCGGACGGCCTTGTG 2836270 29 100.0 32 ............................. CGGCTGGAGTCGGAGGTGAGCACTTCGTCGGC 2836331 29 96.6 32 ............................C GTCGCCACCGGTAACGACGTGGTGGGCGTCCA 2836392 29 100.0 32 ............................. TTTCCTCGCTCGGTGCCGATTAACGAGCGTCC 2836453 29 100.0 32 ............................. ATGCTGGGTGGCACCCGTGGCTGATGACCAGC 2836514 29 100.0 32 ............................. CCCGACGTCAAGACGCCCAAGGACGGCAGCGG 2836575 29 100.0 32 ............................. TCCGGGATCTGTATGACCAGCTCATGCCGGAG 2836636 29 93.1 32 ..........T.................C CGGGCGCGACGCGGCGGCAAAAAGAAGTGATC 2836697 29 96.6 32 ............................T CGCCAGTGTTCCGCCCAATGAGAAGTTCTGAG 2836758 29 100.0 32 ............................. TCCCGCTAGTGCCAATGCTCGAGGCTCGCCTT 2836819 29 96.6 32 ............................C TCCTCAGCACCGGCGAATCCGAGCCGCCGACC 2836880 29 100.0 32 ............................. CGGGCGGCGACTTTCGCCGCGAGCACGGGCAA 2836941 29 100.0 32 ............................. CCCTTGCCGGCCTGCACGCCGGCGTCGAACAG 2837002 29 96.6 32 ............................T TCCGGTCGCTGCCCAGGACAATGACTGCCCCG 2837063 29 100.0 32 ............................. GACACGCGGCGCTACTACCGGCAGGCGGCGGA 2837124 29 96.6 32 ............................A CCCCTTCAGGGTTCATGTAGCCGGGCTTCGCG 2837185 29 96.6 32 ............................T CAGTCTCTCTGCCGCGCGACCGCGGCATTCAT 2837246 29 96.6 32 ............................C CGCGTGGCCATTTTCCACGGGGTGGTACCACC 2837307 29 96.6 32 ............................C TGATCACGCAGCTTATGCAGGTCAAGGACCCG 2837368 29 100.0 32 ............................. AATGACAATAGAGTAGTGGGGTGCCTTCTTAG 2837429 29 100.0 32 ............................. CGCTGGGCGACCACCATGAACGGGCACGTGGC 2837490 29 100.0 32 ............................. CCGGCCAGCGCGCGGCCTGGCCGCTCTTGACC 2837551 29 100.0 32 ............................. GGCATCACGGTCGAGGTGATCCAGCTCGACGC 2837612 29 96.6 33 ......T...................... GAGGACCCGAAGGCCCGCACCGCGTACGACCGC 2837674 29 96.6 32 ............................C ACCGAGCGTCGCGGTCCTCTGCGTTTTGAGGA 2837735 29 96.6 32 ............................C CGTCACGGGGTCGGGGTCAGAGTCGCGACCCG 2837796 29 100.0 32 ............................. CACGCTGGCCCATTTCCAACGGGGACGAGGAT 2837857 29 96.6 30 ............................C CCCGGGGCAAGCCCGTCGTGCTCGTTGGGT 2837916 29 100.0 32 ............................. TTCTCCCGGTTGGCCAAGGCCCAGAGCAGGAG 2837977 29 96.6 32 ............................A GGCCCACTCTTTGCCATGTTTGTCCAGTTCGG 2838038 29 96.6 32 ............................C GCTCGCCACCGCGATAACGACGGGAGGGGCGT 2838099 29 100.0 32 ............................. TCGATGAAGTCGAACAGGACGGTGCCCGTGCC 2838160 29 100.0 31 ............................. CGTTTCGCTGAAAAGTACAGGGGGAAATTCG 2838220 29 96.6 32 ............................A TGGCGTACGACACTTACGGGCTGAGAGTTGCC 2838281 29 96.6 32 ............................T TGCTCGGGTTGTTGATCGCGGTCGTGTCCTGG 2838342 29 96.6 32 ............................C CTCGAGCACACGATCATGCTCAACTGCAGTCC 2838403 29 96.6 32 ............................C GCGATGATCGGCTGATACATCAACGATTCGAG 2838464 29 93.1 32 ............A...............C TATCCCGAGAGTTGGTCCGCGCGATGCTCGCC 2838525 29 100.0 32 ............................. ACCGCCAAGCAGTACGAGCACATTGTGCCAGC 2838586 29 96.6 32 ............................C CTGGCGGGTCACCTCGGCGAGCCGGTTCTGCG 2838647 29 96.6 32 ............................A GCACCCCGTACCACGGGGGCGAGTCCTTGCGC 2838708 29 100.0 32 ............................. AGCTTTTCCCCGGAGGAGGAGGGGCCGGCCTT 2838769 29 100.0 32 ............................. CGCTGACGTCCTGTCCTGCCCGACCCCCTGCG 2838830 29 96.6 32 ............................C GTCAGCGTCCGGCCGTACTGCGTGCTTTGCGA 2838891 29 100.0 32 ............................. GTCGAATCGGCTGTAAAGGGACAGGGAGAGAC 2838952 29 100.0 23 ............................. ATCGGCGACATGGACCGGGCCGC Deletion [2839004] 2839004 29 86.2 33 .CA...........G.............T CCGCATCGTCGCCGTCCCCGAGGGCGGCGTGCA 2839066 29 100.0 32 ............................. TTCTCTGAGTACGCCCACCTGTACGAGTGGGG 2839127 29 100.0 32 ............................. TACGGCATCTCGTACGCCACAGTGCTGCCTGG 2839188 29 100.0 32 ............................. TTTCCTCGCTCGGTGCCGATTAACGAGCGTCC 2839249 29 100.0 32 ............................. GCGTTGAGATTGGCGATGTGCTCGGGAAGGTA 2839310 29 96.6 0 ............................C - Deletion [2839339] 2839339 28 82.8 32 -C.T.TT...................... AGCGTCATTCGCTGGGATTCCGTTGAGGAGCT GA [2839347] 2839401 29 96.6 32 ............................C TGGGGTCTCAACGAGCAGCTCCTAGCGCTGAC 2839462 29 96.6 32 ............................A CGATCAGGCCAGCGCGGCAGGATGATCGGGTG 2839523 29 96.6 32 ...............T............. GACGCCAACAACGTCTACATCTGGCAGGCCGG 2839584 29 96.6 32 ............................C GTCGCTTTCCCCTTTGGCCGCCGCCCTCGGGC 2839645 29 96.6 32 ............................C ACCTACGTGCCCCCGGGCACGCACACGGTGAC 2839706 29 96.6 32 ............................C CGGCCTCGGCTGTTCTCGTACAGCTTGCGCCG 2839767 29 96.6 32 ............................C CAGGACACGATGTCCTTGATCCATTGGACGCC 2839828 29 100.0 32 ............................. CACGTCGCCCCGAGCGCGATGCCCGGGACGGT 2839889 29 96.6 32 ............A................ CCCGCCAGCACCGACACGTCCATCACCACGGA 2839950 29 96.6 32 ............................A ATCTGCCGGAAGAAGTAGTCGGTGCCCTGCTG 2840011 29 100.0 32 ............................. TACGCCCTGCGGTGCGCCTTCCTGGCGCTCGG 2840072 29 100.0 32 ............................. TGGCTGGCGGACGTGAAGCGGGAATGGACCTT 2840133 29 96.6 32 ............................T CTCAACGCGGGGTCAGTAGCGCGTACGGGGCG 2840194 29 100.0 32 ............................. CCGTCCGCGTTGCCGCCGGGCGCCGCCCAGGC 2840255 29 96.6 32 ............................C AGGCGATGCAGCGCCTCACGGACCTGCACGAC 2840316 29 96.6 32 ....................T........ CTATCCAGCTAGCTTGTAGGTGATCCACATGC 2840377 29 96.6 32 ............................T GTGAGACGGCTAGCCCGCCCCACTGTCGCCCG 2840438 29 100.0 32 ............................. AGCGAGTCCTGGGCCCGGGTGGTGAGGGGTTC 2840499 29 96.6 32 .........A................... CGCATCAACGGGTTCGTGGATCGGGCCGGCCG 2840560 29 96.6 32 ............................A GAGCCAGCGCCGTTGGCAAGCGTGCGGATCAC 2840621 29 93.1 32 ............T........A....... GGGACGTACCCATGGCCAGACCCCATGTTGGT 2840682 29 100.0 32 ............................. CATTGCCCCGGGTGCGAGGGCCACGTGGCCGC 2840743 29 96.6 32 ............................T GGGACGCTGACCCTGGCCGAGGACGAGACCGG G [2840765] 2840805 29 96.6 32 ............................C GCGGACGGCACGGTCAAGTGGCGTGCGCTGGA 2840866 29 100.0 32 ............................. CCGTCGGGGGACAATCTCGCGCGGCTCGTCGC 2840927 29 96.6 32 ............................C CCGCTCAGGGGCGGGTGCCTGGGGTGGAGCTC 2840988 29 100.0 32 ............................. TAGTAGACGCCATATCACGCCGTTCCATCCGT 2841049 29 93.1 33 ....C.................C...... CCCCCGGGCCGGGATCGCGGCCCGGTAGAGGAG 2841111 29 93.1 32 ...............T.....A....... GCCCGTGCGACGTGCAGTGTGGTACCGGCATC 2841172 29 100.0 32 ............................. GCGATCGGCAACATCGCTGAGGCTATGGCCCC 2841233 29 96.6 32 ............T................ GATCCGGAGGACTACCTGGTCGGACAGTCCAT 2841294 29 96.6 32 ...........A................. TACCACGCGGGCGCGAAGGTGGACCGATCGAA 2841355 27 89.7 30 .....-...........-..........C TGGGCGCGTCTCGTAGAAGGGCGTGCCGAG 2841412 27 93.1 0 .................--.......... | ========== ====== ====== ====== ============================= ================================= ================== 123 29 97.6 32 GTCGGCCCCGCGCATGCGGGGGTGTTCCG # Left flank : TCCCTCCGCGTCGACCCTCTGGAATGCCGGAGTCGCCTTACCGCAGTCATGAATCCCACACAACCACGCGAAAAACAGCCTGCCTCGGCCCTGCGAAAGCGTGTTCAACACCCGTTTTGTGGAGGGAGCCAGATAGTTATCCCATATTTGCTCCGCCACCGCCGCAGTGTCCAATAGATGCGAAAGCAGAAGATTTGTCCTGCCTCCTGCTTTCTGGCGCGATTTACCCCATAGCGCACCAAGTTGCCGCATCACGACCGGATCGCAGTCAAGCGCGTCATGCCAATTCATCACACCTCCTCCCATCAAGCCCGCACCCTAACCGCCGCCACCGACAAAACAGAGCCCCACGGCGCATCTCCGGTATCGTTCAACTTCTGCGTAGCGTTAGCAGGACGATCAACCTGAAGATAAGCCGTAGGCAGGGAATGCAGCAGCCCACCGATTCGCAACCGAAGGAAACCAGCGCACTCCGCTGGTAAACCCGCAGGTGAACAAGT # Right flank : GCTCCAGGCGGCAGTCATGGCCGGGTCACCAACGTCATGCTTGGTATCCGCTATGTCACGCGGCAGTGGAGTGATCGCGCCCTGCGAGCTTCCCTTCAAGACCAATTCGCTTGATCCAACGTCCCCACCGAGCACTCCGCGCGAACTGCTCAGCGATAACCCGGCCCGACGGGAGCGCCCCATCAGGAAGGCGATTCGCCAGAGCCCACCGCCAAGCGGTTCGACGGAGATCTTCCCTCCCGAACTCATCAGGACCCGCTTGCTCTGGCGAATCGTGGTCATAGACCCCGACAGGTTCCGGATCCCTTGCCACCTCGCCCTGCGCCCCAACTGGCTCTTGGGCGGAAGCTTGACGGATCTGGGACATCAAGAGCTCGTAACTGCCGATCAAAGCGGCGCTTGGCCAAGCGGCGATGATGCGACCGATCAGGCTCGGATCGGCGACGGCGATGTTGGCTCCGAGGCTGGCGAGGCTGCCGATCAGCAACATGGTCCAAGCC # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:-0.02, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCGCATGCGGGGGTGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGTCCCCGCGCACGCGGGGGTGTTCCC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-27] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //