Array 1 62521-61821 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JADMSK010000007.1 Lactobacillus johnsonii strain BSD2780061687_150420_B4 NODE_7_length_66757_cov_50.6771, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
     62520	    29	 100.0	    32	.............................	AGACGATCTTGTTTGTGTAAGTACAAATTGAC	
     62459	    29	 100.0	    32	.............................	GAGAACTTCCCTAAAAAATATATCCGAGGCGA	
     62398	    29	 100.0	    32	.............................	AATGTTGTACAGACTTTAAGAGTTATTGCTAG	
     62337	    29	  96.6	    32	............................C	CACTTAATAGGCACTTTTTTACCATTATCACT	
     62276	    29	  96.6	    32	..A..........................	CTTACCGCCTATAGTTTCATCATATTGAGGCG	
     62215	    29	 100.0	    32	.............................	AAACTGATAGGAATCTCCAACCTTGAACCGAT	
     62154	    29	 100.0	    32	.............................	TCTGCAAAACAAATCAGAAGCTTGAGACCCAA	
     62093	    29	  96.6	    32	............................C	AGCCAATACTATTTAAAGCGCAGGGACGCCCT	
     62032	    29	 100.0	    32	.............................	AAAGTTAATGACAGTCTCTGCCTTTTTAGCGT	
     61971	    29	 100.0	    32	.............................	CGCAGATTACTGGTAGTAACAGCAGGTTTACT	
     61910	    29	  96.6	    32	..............A..............	GAAGTAATAGGTTTAAGACAGGGTGAAAATAA	
     61849	    29	  82.8	     0	..A..........G.......G.A....C	|                               	
==========	======	======	======	=============================	================================	==================
        12	    29	  97.4	    32	GTGTTCTCCACGTATGTGGAGATGATCCT	                                	       

# Left flank :   AAGAATGGAAAAGTTGATGTATTTTATAAATTAATTAGGGATGTAAACTGTATTCCGGCCGATGTAAGTAAATTAACAGGTTTGAATATGAAGATATTAAAATCGAAAGGAAGTAATTTAATCGAAGTTTTAAAAATGCTAAAAGACTTTCTTGGAGATCGAATTTTATTAGGTTACAATTTAACATTTGATATTAGTTTTTTGGATATAGCCTATAAAAGAAATAAGATTTCTGGATTAATTAATACTTCTAAAGATTTACTTCCGATAATTAAAAAGAATAATAAATTTCTTGATAATTATAAGTTGAGTACAGTATTGTCTGAATATAAAATTGAAAATCAAAATCCACATCATGCGGATTTTGATGCAAAAAGTACGTATCAATTAGCATTGAAGTTGATTAATGAGGGAAAATTAAAGCTTTAAAGTTTGGTAAAAGTAATGTATTTGGACCATTACATCTTTTTAAAATGTTGCTACGATAGGATTCTTTTAGT
# Right flank :  ATGAAAAGTGGTGTTGGCAAAATTAATAACTCGTATTCTCCAGTAAATAAAAAATGCCACATCATTCAAAATATACTATATCTATACAATCCTACGTTAATCAGTTGAATGACTTGATAGCCCATATTAGTTGATTTATATAAAAAATATCAAGAGAGAAAAAATATGACACCATCAATTGACTAAAGGCCAATAGGATTTGCTACAATAATCAAAGGACAAGTGAACGTAGTTTATTAGAGAGAAGAACAATGGCGCTATGCTAAAAAAGCGACTCACGAGTCCACTATGAAAGTAGGAGATAGTTGGGTGAACGTGCATAAATACTAGATAGGTGCGGGTGCAAATCTCGCGTTGCATGTCTTAAAGAAAACGATACTCAAACGAGTGTCGTTTTTATTTTGTATTTTTTCTGGAGGGTAGGACTTAAATATTTAATAAAGATAATCCAGATTATCATCCCATAACTAAATACACTAACTCTACTTGTTATGAAATCA

# Questionable array : NO	 Score: 6.13
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCTCCACGTATGTGGAGATGATCCT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:51.72%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-8.50,-9.10] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [6-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [68.3-71.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,0.78   Confidence: HIGH] 

# Array family : NA
//