Array 1 264012-265433 **** Predicted by CRISPRDetect 2.4 *** >NZ_ALRJ01000013.1 Streptococcus agalactiae BSU92 ctg7180000002087, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 264012 36 100.0 30 .................................... TTTCATTTTTACGGTTACGGTTGACTGCTA 264078 36 100.0 30 .................................... AGTTACTTCTGCTTGGGTTTGATAAGGGTC 264144 36 100.0 30 .................................... GAAATGTGGAGTCATTCAGGTTGATGATGG 264210 36 100.0 30 .................................... AAAAAATAAATGACTTTAAAGCACTTGGAG 264276 36 100.0 30 .................................... TAGTAGCCATTATTATTATGGCTTTTATTT 264342 36 100.0 30 .................................... GGATGATTTCGATTATGCGGCGGTGGTTGA 264408 36 100.0 30 .................................... AAATGTTAATTTCATATCTACATCTTGTTC 264474 36 100.0 30 .................................... ACATAACGTTCAAAAGTTTCCACTAATAGC 264540 36 100.0 30 .................................... TCAAACAACATTGGTGATCTTATTGCGGTA 264606 36 100.0 30 .................................... TTATTTAAGACGTGATTTAATGTTAAAACT 264672 36 100.0 30 .................................... CAAACTATCTTGATTATAAGTGGACTGATA 264738 36 100.0 30 .................................... ATTTTTACACGAGTGCTAGAAAACGGGGCA 264804 36 100.0 30 .................................... ACATTTGTTAAATTTGAACTTACTGGAAAT 264870 36 100.0 30 .................................... TCCAAAACAAATACGAATGCTTGAGCGATA 264936 36 100.0 30 .................................... GATTACCTTAGATGATGTTCTAATCGGTAA 265002 36 100.0 30 .................................... TTAACAGTTTCAAGTCTGTCTTGTTACTTA 265068 36 100.0 30 .................................... ACTCTAAATGATAGTTATGAGTTAAATGTT 265134 36 100.0 30 .................................... CAAATTACAGTTTCGACTGATTATGGAAAT 265200 36 100.0 30 .................................... ATATGTTCCACTCTATGAATTTAGGCTCAT 265266 36 100.0 30 .................................... TTTTTACCAATGCTTCCATATCGCTTATAT 265332 36 100.0 30 .................................... TACTTGACGAATTGAAGATGACGGAATTTA 265398 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 22 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : CAAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //