Array 1 953162-950814 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHBFR010000001.1 Leuconostoc gelidum subsp. gelidum strain KAPA3-9 NODE_41_length_1052988_cov_62.178032, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================ ================== 953161 36 100.0 30 .................................... TTCAGATGCCTATGCTATTGAATGGAACAA 953095 36 100.0 30 .................................... TAAGAAATCACTTAATAGAACAAACCAGCT 953029 36 100.0 30 .................................... TTTAGGATTTATTGCCTTAGGAGATTCTCC 952963 36 100.0 30 .................................... AAAAAGTGAAAACGATGTGCCACTTCCTTG 952897 36 100.0 30 .................................... ATAAAAACTTATTACAAATTCAGAATATGA 952831 36 100.0 30 .................................... GTTATTGGAAGACACATCATTACCAAATAA 952765 36 100.0 30 .................................... CCAACACGATAAAAATTATCTTGAAGGTCA 952699 36 100.0 30 .................................... TTTAGCTGATGTTGATAGTCCAATCATGTA 952633 36 100.0 30 .................................... CAGCGTTATTTAATGCTGACATAATCACCA 952567 36 100.0 30 .................................... GTGAATCAGTTAACTCCAACCGGTTATTGG 952501 36 100.0 30 .................................... TCTTTTTTGGGTCTACATTTTCTTGTTCTG 952435 36 100.0 30 .................................... ATAATCATCATCAAAATAGTCAAATCCGAT 952369 36 97.2 30 ...........T........................ TACTTAGATCAGTTTCAAGCAATCCGTCGT 952303 36 100.0 30 .................................... CGCGCTATCGCTCTGACGATTGATTACATG 952237 36 100.0 30 .................................... TGAACGGTTAGTTCGCACAGAAAGTACATA 952171 36 100.0 30 .................................... TGCATGGTCGATTAATAATGCAGTTGATGA 952105 36 100.0 30 .................................... TGCCCCAGCGGAAGCATTGTCTTTGACTGC 952039 36 100.0 30 .................................... CTTGGAATTACCCAGGACGTGTTTATATGG 951973 36 100.0 30 .................................... TTGTGTGAAATCGGTTGTCACACGTCTGTC 951907 36 100.0 30 .................................... CCTTCCATGATGATTTAGATCAGAATTTAA 951841 36 100.0 30 .................................... ATAATCCAGAGTTGTTAAAGCGTTTGAATG 951775 36 100.0 30 .................................... TATTCAACAAGTTGCTAATTTGGGAACAAG 951709 36 100.0 32 .................................... AAGTGACCAGTTCGAGATGTCGCGGAATAATG 951641 36 100.0 30 .................................... AAATAAAAAGTATGATGATATGCTGATAGA 951575 36 100.0 30 .................................... TATCAGTATGCAATGACTTCTCTTCCCACT 951509 36 100.0 30 .................................... GCCGCCGCGCACAATTAACAAGAAGGCTGG 951443 36 100.0 30 .................................... CCTGACTACTAATACCTTGAACAGCTGCAT 951377 36 100.0 30 .................................... TTAGGATACTGCACAATTACAGCACACCCA 951311 36 100.0 30 .................................... CACTAAAAGGTTAAGGGGAGAAGTTCCATG 951245 36 100.0 30 .................................... ACAGTAACAGGAATTTGGAACGTGTTTGTT 951179 36 100.0 30 .................................... TTGCGTGAAATCAGTCGTCACACGCCGGTC 951113 36 100.0 30 .................................... CACTTACTAACATAATAGTTTCCTCTTTTC 951047 36 100.0 30 .................................... CGGCATCGAAGAGTTAAACATGTTGTTTGA 950981 36 100.0 30 .................................... ATCGATATAGCTAACTCCACTTAATCCAGT 950915 36 100.0 30 .................................... AGTGAACTAAAGAAGGCTTATTCTAATTCT 950849 36 94.4 0 ..........................A.......A. | ========== ====== ====== ====== ==================================== ================================ ================== 36 36 99.8 30 GCTTCAGATGTGTGTCAGATCAATGAGGTTCAAACC # Left flank : GGTGCGCAACTTGATGTGAATAAGTTGTATCAAAAAAATATCGTTAATACAATGAAAAATTATGCAGATGATCAAGCGTTAGAAGTGTTTTATAAAATAAATTCTGAATTAAATCATGTCTTAGAAAACATTATATTAGAGAATAATTTGCCCTTTTATTTTCAAACAGAATTCAATATTGTCGAATTAATAAATGAGAAAAAATTTAAGATAGAAACACTGACAAACAGCTCTGGATTTGGTAAAATAGAAGATGTAGTAAGCGTTGCTGGTGAGTTTTCAGAGCAACGTTTAATCGTTTTTACAAATTTGTATTTGTTGTTATCGGTTGATCAGATTGACTATCTGAATAATCTAGCGAAGACAATGAATTTATGTTTAATTTCTCTTAATTTGACACAAAATCCTGTTATGACTAAACAGGGTTTGCCTCCGGAAGTCTTTATTGATGAGGATTTCGTTCAATTTGGCGCTGACTAGCTGATGCGAACAGGCGGTCT # Right flank : TTATGTACATGGCAATTTATATTGAAATTAAATACCATATTAATAAAGTGAAAGCGCTTAGGCGCTTTTTATATGCCATATATGTCAAAAAAGAAGTTTACGCGAATAACGATTATGGTATGATATATTATGTTATAAATAATCACGTCAAACGTGAGATGGAGAAAGGGAGATTTTCCTGTTTTGGTAAATAAAAAATTGCGAGTGAAAGAACTACTTGTTTCAACAATAATTATTGGTGGCGTTCTGGGCACCATGTCTACGGTTAATGCTGCTGAAAATACAGCGCATGTATCGACACAAGTGCCAAGTACAATAACATCAGGTTCGAGTGGTACATCACAAGCGCCAAGCACTAAGACATCAAGTTCAACCATAAATGAGTCGAGACAAAATGATAATTATAATGTGACGCCGTCAACAAGGTCTATTCAAGTACATCAAGCTAAATTTAAAACCGGTTCTGTAATCGCATTGACTAATTCAGCAAAAACGTCCAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAGATGTGTGTCAGATCAATGAGGTTCAAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA //